Protein Alignment CG7903 and pabpc1b

DIOPT Version :10

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_957176.1
• Gene: pabpc1b / 393856
• ZFINID: ZDB-GENE-050308-1
• Length: 634
• Species: Danio rerio
• Alignment Length: 181
• Identity: 42/181 - (23%)
• Similarity: 68/181 - (37%)
• Gaps: 45/181 - (24%)

  Fly     7 VFVGSLPR-CKPEELRRLFTNYGSVVECDVMNRC--------AFVHLENTDMAEAAIAALNGTIF 62
            :|:.:|.: ...:.|...|:.:|:::.|.|:  |        .|||.|..:.||.||..:||.:.
Zfish   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVV--CDENGSKGYGFVHFETQEAAERAIEKMNGMLL 163

  Fly    63 KGQPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNFREEVGGR- 126
            ..:.:.|  ||.|                 .|:..:.:.|.   |..|....:.:||.|::...
Zfish   164 NDRKVFV--GRFK-----------------SRKEREAELGA---RAKEFTNVYIKNFGEDMDDDK 206

  Fly   127 ----FSNEGPRSS-------NSSAAKFGPVRNESNYRQQRSAPYSKGPPNN 166
                ||..|...|       |..:..||.|..|.:...||:.....|...|
Zfish   207 LKDIFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVDEMNGKEMN 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM_SF	6..70	CDD:473069	18/71 (25%)
		PABP-1234	<18..173	CDD:130689	40/169 (24%)
pabpc1b	NP_957176.1	PABP-1234	11..613	CDD:130689	42/181 (23%)