Protein Alignment CG7903 and lark

DIOPT Version :10

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Alignment Length: 311
• Identity: 84/311 - (27%)
• Similarity: 120/311 - (38%)
• Gaps: 53/311 - (17%)

  Fly     2 NT-TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKG 64
            || |.|:|||:| .:.:..|:|.||..||:|||||::....||||:.....:.||..|||.:..|
  Fly    82 NTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDG 146

  Fly    65 QPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNFREEVGGRFSN 129
            ||:.|:....:..|      :||.||     |.|.                   :|....|.:|.
  Fly   147 QPLKVQVSTSRVRP------KPGMGD-----PEQC-------------------YRCGRSGHWSK 181

  Fly   130 EGPRSSNSSAAKFGPVR--NESNYRQQRSA--PYSKGPPNNESSNQG--QGFRNKFAGGGKFGGS 188
            |.||...|:.....|..  :...||.:...  ||...||........  .|||:......:|..|
  Fly   182 ECPRLYGSAGGGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDS 246

  Fly   189 AG-NEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGSVNQRAGGG 252
            .. .|.|:.::|  .||...|...||.....|.:      .:...:..|.|.|.....::|:
  Fly   247 RDLYERRYQTSR--MRDFPPPPISRREPMPLPPT------LSGSLRSCSVSRGYDTMFSRRS--- 300

  Fly   253 GPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGR 303
             |.|.........:..|..|..:......|....::|  ||..|.:|||.|
  Fly   301 -PPPPRSSNGMSRYGSPTPHGYEDFSRDAFDERMISS--RGMRGPSPPGRR 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM_SF	6..70	CDD:473069	28/64 (44%)
		PABP-1234	<18..173	CDD:130689	45/160 (28%)
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	28/64 (44%)
		hnRNP-R-Q	<88..>258	CDD:273732	56/199 (28%)