Protein Alignment CG7903 and pAbp

DIOPT Version :9

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Alignment Length: 418
• Identity: 91/418 - (21%)
• Similarity: 134/418 - (32%)
• Gaps: 136/418 - (32%)

  Fly     6 KVFVGS-LPRCKPE----ELRRLFTN---------------------YGSVVECDVMNR------ 38
            ||:||. :||.:.|    |..:||||                     ||.:....||::
  Fly   159 KVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSK 223

  Fly    39 -CAFVHLENTDMAEAAIAALNG-TIFKGQPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQG 101
             ..||..|.|:.||||:.|||| .:.:|:.:.|...:.|     ..|.|     ...|:..:::
  Fly   224 GFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKK-----AERQQ-----ELKRKFEELK- 277

  Fly   102 GGADKRPHES--NTN-FKRNFREEVGG-----RFSNEGPRSSNSSAAK-----------FGPV-- 145
                ::.|||  ..| :.:|..:.:..     .||..|    |.::||           ||.|
  Fly   278 ----QKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYG----NITSAKVMTDEEGRSKGFGFVCF 334

  Fly   146 ---------RNESNYRQQRSAP-------------------YSKGPPNNESSNQGQGFRNKFAGG 182
                     ..|.|.|...|.|                   |.:..........||.::...|.|
  Fly   335 NAASEATCAVTELNGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASG 399

  Fly   183 GKFGGSAGNEGRFGSNRFQQRDNSG---PQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGS 244
            ........|:..|||....|..|:.   ||.       .|.:..:|      .|.|::::||
  Fly   400 FFVPTLPSNQRFFGSQVATQMRNTPRWVPQV-------RPPAAIQG------VQAGAAAAGG--- 448

  Fly   245 VNQRAGGGGPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNP-------PGG 302
               ..|..|..|:..|....|........|.........|...|:|.|...|...       ||.
  Fly   449 ---FQGTAGAVPTQFRSAAAGARGAQPQVQGTHAAAAAANNMRNTGARAITGQQTAAPNMQIPGA 510

  Fly   303 RGFFNGGGGGFNDRRDSSHETSSPQGGP 330
            :     ..||...|..:...||:.:..|
  Fly   511 Q-----IAGGAQQRTSNYKYTSNMRNPP 533

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM	<4..168	CDD:223796	54/244 (22%)
		RRM_SF	6..70	CDD:302621	29/97 (30%)
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	91/418 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439617
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930