Protein Alignment CG7903 and Elavl1

DIOPT Version :10

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_001102318.1
• Gene: Elavl1 / 363854
• RGDID: 1308649
• Length: 326
• Species: Rattus norvegicus
• Alignment Length: 318
• Identity: 59/318 - (18%)
• Similarity: 93/318 - (29%)
• Gaps: 124/318 - (38%)

  Fly     7 VFVGSLPR-CKPEELRRLFTNYGSVVECD-VMNRCA-------FVHLENTDMAEAAIAALNGTIF 62
            :.|..||: ...||||.||::.|.|.... :.::.|       ||:......||.||:.|||...
  Rat    22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRL 86

  Fly    63 KGQPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNFREEVGGRF 127
            :.:.|.|...||
  Rat    87 QSKTIKVSYARP----------------------------------------------------- 98

  Fly   128 SNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQGFRNKFAGGGKFGGSAGNE 192
            |:|..:.:|.                     |..|.|...:....:...::|
  Rat    99 SSEVIKDANL---------------------YISGLPRTMTQKDVEDMFSRF------------- 129

  Fly   193 GRFGSNRFQQRDNSGPQPG--------RRNFKNSPTS--GYRGGGNNS----DFQGGSSSSGGGG 243
            ||..::|......:|...|        |...:.:.||  |::..|::.    .|....:.:....
  Rat   130 GRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMA 194

  Fly   244 SVNQRAGGGGPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPG 301
            .::|.          .....|.|..||.||.|:..|...|...|:    |.:|.|.||
  Rat   195 LLSQL----------YHSPARRFGGPVHHQAQRFRFSPMGVDHMS----GISGVNVPG 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM_SF	6..70	CDD:473069	22/71 (31%)
		PABP-1234	<18..173	CDD:130689	28/162 (17%)
Elavl1	NP_001102318.1	ELAV_HUD_SF	19..326	CDD:273741	59/318 (19%)