Protein Alignment CG7903 and ssx

DIOPT Version :9

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 401
• Identity: 88/401 - (21%)
• Similarity: 126/401 - (31%)
• Gaps: 163/401 - (40%)

  Fly     7 VFVGSLPR-CKPEELRRLFTNYGSVVECDVM--------NRCAFVHLENTDMAEAAIAALNGTIF 62
            ::|.:|.| ...:.|.|:|:.||.:|:.:::        ...|||.....:.|:.||.|||.|:.
  Fly   181 LYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVP 245

  Fly    63 KG--QPIVV----EAGRPKYGP-----GGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFK 116
            :|  |||.|    |.|:.|...     |||:.|  |.|..|...|     ||....||..|.:
  Fly   246 EGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGG--GGGGPPHMGP-----GGPMHPPHHHNNH-- 301

  Fly   117 RNFREEVGGRFSNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGP--PNNESSNQGQGFRNKF 179
                                          :.:|:......|:...|  |:....:..|
  Fly   302 ------------------------------HHNNHHNPHMPPHHHQPQHPHQHPQHHPQ------ 330

  Fly   180 AGGGKFGGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGS 244
                             .:..|..     .|...| .|.|.:.:....||:
  Fly   331 -----------------LHHMQHH-----HPNNHN-NNHPNNHHHNNNNNN-------------- 358

  Fly   245 VNQRAGGGGPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGRGFFNGG 309
               ....|||.|.|::|        :......||.|      :|.| .|...|.|..|.|...||
  Fly   359 ---HHNMGGPHPHHMQQ--------MHPMGMNMGMG------VNMG-MGMGMGMPIHGGGGGGGG 405

  Fly   310 GGGFNDRRDSSHETSSPQGGPSKRGGSGGRNHNQNGINAYHSE-----------FP----PLGSG 359
            |||                     ||.||..|:.    |:..|           ||    |:|:|
  Fly   406 GGG---------------------GGGGGNFHHM----AHRGEVFMLPLPICSRFPSQPHPVGNG 445

  Fly   360 -GGGPGQRNRF 369
             ...|.:.:||
  Fly   446 ICHSPNKNSRF 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM	<4..168	CDD:223796	44/182 (24%)
		RRM_SF	6..70	CDD:302621	24/77 (31%)
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621
		RRM_SF	179..257	CDD:302621	24/75 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439628
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930