Sequence 1: | NP_651755.2 | Gene: | CG7903 / 43554 | FlyBaseID: | FBgn0039730 | Length: | 384 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_569908.1 | Gene: | ssx / 31086 | FlyBaseID: | FBgn0024987 | Length: | 485 | Species: | Drosophila melanogaster |
Alignment Length: | 401 | Identity: | 88/401 - (21%) |
---|---|---|---|
Similarity: | 126/401 - (31%) | Gaps: | 163/401 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 VFVGSLPR-CKPEELRRLFTNYGSVVECDVM--------NRCAFVHLENTDMAEAAIAALNGTIF 62
Fly 63 KG--QPIVV----EAGRPKYGP-----GGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFK 116
Fly 117 RNFREEVGGRFSNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGP--PNNESSNQGQGFRNKF 179
Fly 180 AGGGKFGGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGS 244
Fly 245 VNQRAGGGGPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGRGFFNGG 309
Fly 310 GGGFNDRRDSSHETSSPQGGPSKRGGSGGRNHNQNGINAYHSE-----------FP----PLGSG 359
Fly 360 -GGGPGQRNRF 369 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7903 | NP_651755.2 | RRM | <4..168 | CDD:223796 | 44/182 (24%) |
RRM_SF | 6..70 | CDD:302621 | 24/77 (31%) | ||
ssx | NP_569908.1 | RRM_SF | 93..173 | CDD:302621 | |
RRM_SF | 179..257 | CDD:302621 | 24/75 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439628 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |