DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and Raly

DIOPT Version :9

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_008760536.1 Gene:Raly / 296301 RGDID:1307228 Length:311 Species:Rattus norvegicus


Alignment Length:375 Identity:81/375 - (21%)
Similarity:122/375 - (32%) Gaps:121/375 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKVFVGSLPRC--KPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
            ::||:|:|...  |..::..:|:.||.|..|.|....|||...|...|.||:...||.:..||.:
  Rat    21 SRVFIGNLNTAVVKKSDVETIFSKYGRVAGCSVHKGYAFVQYANERHARAAVLGENGRVLAGQTL 85

  Fly    68 VVE-AGRPKYG-PGGGSRGQPG--SG-----------------DNPGR-RPSQVQGGGADKRPHE 110
            .:. ||.||.. |.|..|....  ||                 |..|| .|..|......|||..
  Rat    86 DINMAGEPKPNRPKGLKRAATAIYSGYSFDYDYYQDYYCARLFDYRGRLSPVPVPRAVPVKRPRV 150

  Fly   111 SNTNFKRNFREEVGGRFSNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQGF 175
            : ....|..:..:..:........|..||    .::.:|:..|......::...|.::.      
  Rat   151 T-VPLVRRVKTTIPVKLFARSTAISTGSA----KIKLKSSELQTIKTELTQIKSNIDAL------ 204

  Fly   176 RNKFAGGGKFGGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSG 240
                            .||......:|:.|   ..|::.            |::|...||.||||
  Rat   205 ----------------LGRLEQIAEEQKAN---PDGKKK------------GDSSSGGGGGSSSG 238

  Fly   241 GGGSVNQRAGGGGPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGRGF 305
            ||||.|..:||                                     ||..|::...||.    
  Rat   239 GGGSGNVGSGG-------------------------------------SGGSGSSSSRPPA---- 262

  Fly   306 FNGGGGGFNDRRDSSHETSSPQGGPSKRGG---SGGRNHNQNGINAYHSE 352
                     .:.|::.|..:|||....|..   .|...|::..:.  ||:
  Rat   263 ---------PQEDTASEAGTPQGEVQTRDDGDEEGLLTHSEEELE--HSQ 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM <4..168 CDD:223796 46/186 (25%)
RRM_SF 6..70 CDD:302621 22/65 (34%)
RalyXP_008760536.1 RRM_RALY 20..95 CDD:410016 25/73 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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