Sequence 1: | NP_651755.2 | Gene: | CG7903 / 43554 | FlyBaseID: | FBgn0039730 | Length: | 384 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163955.1 | Gene: | Rbm4 / 293663 | RGDID: | 1306891 | Length: | 365 | Species: | Rattus norvegicus |
Alignment Length: | 287 | Identity: | 66/287 - (22%) |
---|---|---|---|
Similarity: | 110/287 - (38%) | Gaps: | 73/287 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
Fly 68 VVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESN---TNFKRNFREEVGG---- 125
Fly 126 ---------RFSN------------EGPRSSNSSAAKFGPVRNESNYRQQRSA------------ 157
Fly 158 --------PYSKG--PPNNESSNQGQGFRNKFAGGGKFGGSAGNEGRFGSNRFQQRDNSGPQPGR 212
Fly 213 RNFKNSPTSGYRGGGNNSDFQGGSSSS 239 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7903 | NP_651755.2 | RRM | <4..168 | CDD:223796 | 51/214 (24%) |
RRM_SF | 6..70 | CDD:302621 | 27/64 (42%) | ||
Rbm4 | NP_001163955.1 | RRM1_RBM4 | 2..68 | CDD:410018 | |
RRM2_RBM4 | 78..144 | CDD:410019 | 27/65 (42%) | ||
PTZ00368 | <145..>181 | CDD:173561 | 8/41 (20%) | ||
ZnF_C2HC | 161..176 | CDD:197667 | 2/14 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |