DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and Tia1

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_035715.1 Gene:Tia1 / 21841 MGIID:107914 Length:386 Species:Mus musculus


Alignment Length:191 Identity:46/191 - (24%)
Similarity:74/191 - (38%) Gaps:48/191 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFVGSLPRCKPEEL-RRLFTNYGSVVECDVM--NRCAFVHLENTDMAEAAIAALNGTIFKGQPI- 67
            |:.|.:.....|:| |:.|:.:|.::|..|.  ...:||...:.:.|..||.::|||..:|..: 
Mouse   216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVK 280

  Fly    68 -------------VVEAGRPKYGPGGGSRGQ-PGSGDNPGRR-PS--QVQGGGADKRPHESNTNF 115
                         |.:..:..|.|..|..|| .|:....|:. |:  ||...|...:|       
Mouse   281 CYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQQIGQYVPNGWQVPAYGVYGQP------- 338

  Fly   116 KRNFREEVGGRFSNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQGFR 176
                       :|.:|...:.|||...||     ||    |.|..:|...:...:|..|:|
Mouse   339 -----------WSQQGFNQTQSSAPWMGP-----NY----SVPPPQGQNGSMLPSQPAGYR 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 19/79 (24%)
PABP-1234 <18..173 CDD:130689 42/175 (24%)
Tia1NP_035715.1 RRM1_TIA1 8..81 CDD:410027
RRM2_TIA1 104..181 CDD:410030
RRM3_TIAR 214..286 CDD:241064 18/69 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..376 8/29 (28%)
Blue background indicates that the domain is not in the aligned region.

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