DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and ELAVL3

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001411.2 Gene:ELAVL3 / 1995 HGNCID:3314 Length:367 Species:Homo sapiens


Alignment Length:210 Identity:42/210 - (20%)
Similarity:67/210 - (31%) Gaps:77/210 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKVFVGSLPR-CKPEELRRLFTNYGSVVECDVM--------NRCAFVHLENTDMAEAAIAALNG- 59
            |.::|..||: ...:|:.:||:.||.::...::        ....|:..:....||.||..||| 
Human   125 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189

  Fly    60 -TIFKGQPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNFREEV 123
             .:...:||.|:.                     ...|||..|.......::|:.      |...
Human   190 KPLGAAEPITVKF---------------------ANNPSQKTGQALLTHLYQSSA------RRYA 227

  Fly   124 GG--------RFSN-----EGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQGF 175
            |.        |..|     .|.:|..|..|:|.|:..:.                          
Human   228 GPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAIDG-------------------------- 266

  Fly   176 RNKFAGGGKFGGSAG 190
            .:..||.|..||:||
Human   267 MSGLAGVGLSGGAAG 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 18/74 (24%)
PABP-1234 <18..173 CDD:130689 31/177 (18%)
ELAVL3NP_001411.2 ELAV_HUD_SF 36..366 CDD:273741 42/210 (20%)

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