Protein Alignment CG7903 and hrpa-1

DIOPT Version :10

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_001040945.1
• Gene: hrpa-1 / 177101
• WormBaseID: WBGene00001999
• Length: 347
• Species: Caenorhabditis elegans
• Alignment Length: 396
• Identity: 94/396 - (23%)
• Similarity: 138/396 - (34%)
• Gaps: 123/396 - (31%)

  Fly     6 KVFVGSLPRCKPEEL-RRLFTNYGSVVECDVM--------NRCAFVHLENTDMAEAAIAALNGTI 61
            |:|||.|.....::| |..::.:|.:.:..||        ....||........:||:
 Worm    24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM------- 81

  Fly    62 FKGQPIVVEAGRPKYGPGGGSRGQPGSGDNPGRRPSQVQGGGADKRPHESNTNFKRNFREEVGGR 126
             |.:|.:::                |...:|.|...:     .||...|||.:.||.:   |.|.
 Worm    82 -KQRPHIID----------------GKTVDPKRAVPR-----DDKNRSESNVSTKRLY---VSGV 121

  Fly   127 FSNEGPRSSNSSAAKFGPV-RNESNYRQQRSAPYSKG---PPNNESSNQGQGFRNKFAGGGKF-- 185
            ..:...........|:|.| ::|....:....|...|   ..:::|.:|....::....|.:.
 Worm   122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 186

  Fly   186 --GGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGSVNQR 248
              |.|.....:...||.::......:.|:|       .||.|||            ||||
 Worm   187 RKGLSKDEMSKAQMNRDRETRGGRSRDGQR-------GGYNGGG------------GGGG----- 227

  Fly   249 AGGGGPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGRGFFNGGG-GG 312
             |.|||.                   |:.|.|.:| ||...|..|..|||..||.|...||| ||
 Worm   228 -GWGGPA-------------------QRGGPGAYG-GPGGGGQGGYGGGNYGGGWGQQGGGGQGG 271

  Fly   313 FNDRRDSSHETSSPQGGPSKRGGSGGRNHNQNGINAYHSEFPPLGSGG-GGPGQRNR--FNGPRP 374
            :              |||.::.|.||......|           |.|| |||.|:.:  :.||:.
 Worm   272 W--------------GGPQQQQGGGGWGQQGGG-----------GQGGWGGPQQQQQGGWGGPQQ 311

  Fly   375 GPNMGG 380
            |...||
 Worm   312 GGGGGG 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM_SF	6..70	CDD:473069	16/72 (22%)
		PABP-1234	<18..173	CDD:130689	31/167 (19%)
hrpa-1	NP_001040945.1	RRM_SF	24..101	CDD:473069	19/100 (19%)
		RRM2_hnRNPA_like	115..187	CDD:409766	12/74 (16%)