Protein Alignment CG7903 and rnp-7

DIOPT Version :10

• Sequence 1: NP_651755.2
• Gene: CG7903 / 43554
• FlyBaseID: FBgn0039730
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_498565.2
• Gene: rnp-7 / 176002
• WormBaseID: WBGene00004390
• Length: 332
• Species: Caenorhabditis elegans
• Alignment Length: 327
• Identity: 80/327 - (24%)
• Similarity: 111/327 - (33%)
• Gaps: 116/327 - (35%)

  Fly     7 VFVGSLP-RCKPEELRRLFTNYGSVVECDVMNRCA-----FVHLENTDMAE--AAIAALNGTIFK 63
            :|||.:. .....:|||.|..||.:.:..:::..|     :..:|.:|.||  .|....:|....
 Worm   106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVD 170

  Fly    64 GQPIVVEAGRPKYGPGGGSRGQPGSGDNPGRR-----PSQVQGGGADKRPHESNTNF--KRNFRE 121
            |:.:||:..|                   ||.     |.::.||..|.|......:.  :|....
 Worm   171 GKRLVVDYER-------------------GRTQKTWLPRRLGGGKGDTRKTREAKSVIEEREIAS 216

  Fly   122 EVGGRFSNEGPRSSNSSAAKFGPVRNESNYRQQRSAPYSKGPPNNESSNQGQ-GFRNKFAGGGKF 185
            ..||.:.:..              |..|..|.:|...|..|..|:....:.. |||:...|||.|
 Worm   217 GFGGGYEDRD--------------RERSGSRDRRQDSYRNGGGNDRDRRESSGGFRDNRGGGGGF 267

  Fly   186 GGSAGNEGRFGSNRFQQRDNSGPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGSVNQRAG 250
            ||.       |.:||..|...|...|.|:         |||....| :|||..|.||||
 Worm   268 GGG-------GRDRFNDRSGGGGYGGDRD---------RGGDRGGD-RGGSRYSTGGGS------ 309

  Fly   251 GGGPGPSHVRQDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGGRGFFNGGGGGFND 315
            |||                                 ..||. |::||          ||||.:.|
 Worm   310 GGG---------------------------------YRSGG-GSSGG----------GGGGRYGD 330

  Fly   316 RR 317
            ||
 Worm   331 RR 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7903	NP_651755.2	RRM_SF	6..70	CDD:473069	18/70 (26%)
		PABP-1234	<18..173	CDD:130689	34/168 (20%)
rnp-7	NP_498565.2	U1snRNP70_N	4..95	CDD:432406
		RRM_snRNP70	103..192	CDD:409682	23/104 (22%)