DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and LOC1270267

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_308949.5 Gene:LOC1270267 / 1270267 VectorBaseID:AGAMI1_007420 Length:271 Species:Anopheles gambiae


Alignment Length:269 Identity:52/269 - (19%)
Similarity:87/269 - (32%) Gaps:81/269 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 RPHESNTNFKRNFREEVGGRFSNEGPRSSNSSAAKFG----PVRNESNYRQQRSAPYSKGPPNNE 167
            |......:::|.:|:: ..|: |.|...|..:.|.:|    ..|..|::|...|..:...||.:.
Mosquito    14 RSRSRERSYRREYRDD-SERY-NPGTSESGRTPADYGGSSASYRRSSHHRSSHSTAHYHDPPASS 76

  Fly   168 SSNQGQGFRNKFAGG-------------------------GKFG----------GSAGNEGRFGS 197
            |::.|....:..:|.                         .|||          ...|....||.
Mosquito    77 SASGGAHECSSHSGSSSGKVVLAVFNLSVYTTEAELYDTFSKFGPLRKTTVVLDAKTGRSRGFGF 141

  Fly   198 NRFQQRDN--------SGPQPGRR---------NFKNSPTSG--YRGGGNNSDFQGGSSSSGGGG 243
            ..|:..::        :|.:.|.|         |..:.||.|  |....:.....||.||.|...
Mosquito   142 VYFESAEDAKVAHDQANGIEIGDRRIRVDFSATNKPHDPTPGVYYGKVSHPKTGYGGHSSHGMAS 206

  Fly   244 SVNQRAGGGGPGPSHVR------QDRRGFALPVEHQQQQMGFGRFGNGPMNSGNRGTNGGNPPGG 302
            |         .|..|.|      ::|..:......::....:..: :|...|.||...|.:   |
Mosquito   207 S---------HGYHHCRACEVEARERERWERDARSREHYYYYDSY-SGHDRSRNRSMTGRS---G 258

  Fly   303 RG--FFNGG 309
            |.  ::.||
Mosquito   259 RSSDYYRGG 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069
PABP-1234 <18..173 CDD:130689 16/69 (23%)
LOC1270267XP_308949.5 None
Blue background indicates that the domain is not in the aligned region.

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