DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and Tra2b

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_476460.1 Gene:Tra2b / 117259 RGDID:619886 Length:288 Species:Rattus norvegicus


Alignment Length:175 Identity:44/175 - (25%)
Similarity:71/175 - (40%) Gaps:45/175 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ELRRLFTNYGSVVECDVM--------NRCAFVHLENTDMAEAAIAALNGTIFKGQPIVVE---AG 72
            :||.:|:.||.:.:..::        ...|||:.||.|.|:.|....||....|:.|.|:   ..
  Rat   133 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITK 197

  Fly    73 RPKYGPGGGSRGQPGSGDNPGRRPSQVQGG---GADKRPHESNTNFKRNFREEVGGRFSNEGPRS 134
            ||.....|...|:|..|.:  ||......|   |.|.|.:     :.|::|   ||.....|.|:
  Rat   198 RPHTPTPGIYMGRPTYGSS--RRRDYYDRGYDRGYDDRDY-----YSRSYR---GGGGGGGGWRA 252

  Fly   135 SNSSAAKFGPVRNESNYRQQRSAP-YSKGPPNNESSNQGQGFRNK 178
            :..         .:..||::..:| ||:|           |:|::
  Rat   253 AQD---------RDQIYRRRSPSPYYSRG-----------GYRSR 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 17/58 (29%)
PABP-1234 <18..173 CDD:130689 42/168 (25%)
Tra2bNP_476460.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114
RRM_TRA2 117..196 CDD:409798 18/62 (29%)
Linker 193..230 9/38 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..225 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288 12/56 (21%)
Blue background indicates that the domain is not in the aligned region.

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