DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and RBM14

DIOPT Version :10

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_006319.1 Gene:RBM14 / 10432 HGNCID:14219 Length:669 Species:Homo sapiens


Alignment Length:534 Identity:123/534 - (23%)
Similarity:176/534 - (32%) Gaps:190/534 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
            |.|:|||:: ..|..:|||.||...|.|:||||:...||||:|....|:||||.|||...||:.|
Human    78 TWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRI 142

  Fly    68 VVEAGR--PKYGPG-----GGSRGQPGSGDN--PGRRPSQVQGGGADKRPHESNTNFKRNFREEV 123
            .||...  .|.|||     |....:||:||.  ||.       ||     ..:..::::.|....
Human   143 NVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGT-------GG-----FSATFDYQQAFGNST 195

  Fly   124 GGRFSNEGP--------------RSSNSSAAKFGPVRNE-SNYRQQRS----APYSKGPPNNESS 169
            || |..:..              |.|...|:...|:..: :.||.|.|    |.|...|    |:
Human   196 GG-FDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQP----SA 255

  Fly   170 NQGQGFRNK--------------------FAGG--------------GKFGG---------SAGN 191
            :.|.|:|.:                    :.|.              |.:||         |.|.
Human   256 SLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 320

  Fly   192 EGRFGS--NRFQQRDNS----GPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGSVNQRAG 250
            :....|  |.:..:.:|    |.||.....:.:.:.|.|...::.:.||.:||.|..|:.....|
Human   321 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYG 385

  Fly   251 G---------GGPGPSHVRQDRRGF---ALPVEHQQ-----------------------QQMGF- 279
            .         |....|:..|....:   :.|...||                       |...: 
Human   386 AQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYA 450

  Fly   280 --------GRFGNGP-----MNS-------GNRGTNGGNPPGGRGFFNGGGGGFNDRRDSS---- 320
                    |.:|..|     :||       |..|:.|...........|....:..:..::    
Human   451 AQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAP 515

  Fly   321 HETSS-------------PQGGPSKRGGSGGRNHNQNGINAYHSEFPP----LGSGGGG------ 362
            :.|.|             ||...|.||..|         |||.....|    |....|.      
Human   516 YRTQSSASLAASYAAQQHPQAAASYRGQPG---------NAYDGAGQPSAAYLSMSQGAVANANS 571

  Fly   363 ---PGQRNRFNGPR 373
               |.:|.|.:.||
Human   572 TPPPYERTRLSPPR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM_SF 6..70 CDD:473069 32/64 (50%)
PABP-1234 <18..173 CDD:130689 58/182 (32%)
RBM14NP_006319.1 RRM1_CoAA 1..71 CDD:410020
PABP-1234 <3..280 CDD:130689 67/218 (31%)
RRM2_CoAA 79..146 CDD:410021 33/66 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..175 9/27 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..232 7/39 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..303 1/18 (6%)
TRBP-interacting domain, interaction with STIL. /evidence=ECO:0000269|PubMed:25385835 307..354 9/46 (20%)
PRK13875 <319..433 CDD:237537 22/113 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..590 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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