DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7903 and RBM14

DIOPT Version :9

Sequence 1:NP_651755.2 Gene:CG7903 / 43554 FlyBaseID:FBgn0039730 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_006319.1 Gene:RBM14 / 10432 HGNCID:14219 Length:669 Species:Homo sapiens


Alignment Length:534 Identity:123/534 - (23%)
Similarity:176/534 - (32%) Gaps:190/534 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TAKVFVGSL-PRCKPEELRRLFTNYGSVVECDVMNRCAFVHLENTDMAEAAIAALNGTIFKGQPI 67
            |.|:|||:: ..|..:|||.||...|.|:||||:...||||:|....|:||||.|||...||:.|
Human    78 TWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRI 142

  Fly    68 VVEAGR--PKYGPG-----GGSRGQPGSGDN--PGRRPSQVQGGGADKRPHESNTNFKRNFREEV 123
            .||...  .|.|||     |....:||:||.  ||.       ||     ..:..::::.|....
Human   143 NVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGT-------GG-----FSATFDYQQAFGNST 195

  Fly   124 GGRFSNEGP--------------RSSNSSAAKFGPVRNE-SNYRQQRS----APYSKGPPNNESS 169
            || |..:..              |.|...|:...|:..: :.||.|.|    |.|...|    |:
Human   196 GG-FDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQP----SA 255

  Fly   170 NQGQGFRNK--------------------FAGG--------------GKFGG---------SAGN 191
            :.|.|:|.:                    :.|.              |.:||         |.|.
Human   256 SLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 320

  Fly   192 EGRFGS--NRFQQRDNS----GPQPGRRNFKNSPTSGYRGGGNNSDFQGGSSSSGGGGSVNQRAG 250
            :....|  |.:..:.:|    |.||.....:.:.:.|.|...::.:.||.:||.|..|:.....|
Human   321 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYG 385

  Fly   251 G---------GGPGPSHVRQDRRGF---ALPVEHQQ-----------------------QQMGF- 279
            .         |....|:..|....:   :.|...||                       |...: 
Human   386 AQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYA 450

  Fly   280 --------GRFGNGP-----MNS-------GNRGTNGGNPPGGRGFFNGGGGGFNDRRDSS---- 320
                    |.:|..|     :||       |..|:.|...........|....:..:..::    
Human   451 AQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAP 515

  Fly   321 HETSS-------------PQGGPSKRGGSGGRNHNQNGINAYHSEFPP----LGSGGGG------ 362
            :.|.|             ||...|.||..|         |||.....|    |....|.      
Human   516 YRTQSSASLAASYAAQQHPQAAASYRGQPG---------NAYDGAGQPSAAYLSMSQGAVANANS 571

  Fly   363 ---PGQRNRFNGPR 373
               |.:|.|.:.||
Human   572 TPPPYERTRLSPPR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7903NP_651755.2 RRM <4..168 CDD:223796 63/192 (33%)
RRM_SF 6..70 CDD:302621 32/64 (50%)
RBM14NP_006319.1 RRM1_CoAA 1..71 CDD:241052
PABP-1234 <3..280 CDD:130689 67/218 (31%)
RRM2_CoAA 79..146 CDD:241053 33/66 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..175 9/27 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..232 7/39 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..303 1/18 (6%)
TRBP-interacting domain, interaction with STIL. /evidence=ECO:0000269|PubMed:25385835 307..354 9/46 (20%)
PRK13875 <319..433 CDD:237537 22/113 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..590 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1563362at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.880

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