DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and RLP9

DIOPT Version :9

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001185260.1 Gene:RLP9 / 842186 AraportID:AT1G58190 Length:1029 Species:Arabidopsis thaliana


Alignment Length:979 Identity:250/979 - (25%)
Similarity:375/979 - (38%) Gaps:280/979 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 QTFGQLKLTIEELDLSYNLIRR--IPEKAFDGLKDSLNELRLANNLLGDNLNPIFSTAELHVLKN 161
            ::.|:|| .:|.||:..|.:..  :|   |.....||..|.|.    |:|:...|...||..|.|
plant   121 KSLGKLK-KLEILDMGNNEVNNSVLP---FLNAASSLRTLILH----GNNMEGTFPMKELKDLSN 177

  Fly   162 LRLLDLSGNKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALRHLSLRQNQI-GSLLA 225
            |.|||||||        ||.|                 |...|.....|..|.|..|.. |||..
plant   178 LELLDLSGN--------LLNG-----------------PVPGLAVLHKLHALDLSDNTFSGSLGR 217

  Fly   226 D---SFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFE-----KLQSL 282
            :   ||...:.|||:|:..|.:.:...........::.:.|.||.:    ...|.     .|::|
plant   218 EGYKSFERLKNLEILDISENGVNNTVLPFINTASSLKTLILHGNNM----EGTFPMKELINLRNL 278

  Fly   283 QKLDLSEN-FFGQFPTVALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPG 346
            :.||||:| |.|..|.  ||....|:.|::|.|.....:....| :::|..||:|:|..|...|.
plant   279 ELLDLSKNQFVGPVPD--LANFHNLQGLDMSDNKFSGSNKGLCQ-LKNLRELDLSQNKFTGQFPQ 340

  Fly   347 TFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNR 411
            .|..:..|:.||:|.|:........:..|||::.|.:.||..                       
plant   341 CFDSLTQLQVLDISSNNFNGTVPSLIRNLDSVEYLALSDNEF----------------------- 382

  Fly   412 VAALSAEILGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLEST 476
            ....|.|::.:|....:..||...|::|.....|.|....|..::|...:|.  |..:|...:..
plant   383 KGFFSLELIANLSKLKVFKLSSRSNLLRLKKLSSLQPKFQLSVIELQNCNLE--NVPSFIQHQKD 445

  Fly   477 LMALKLSQNRLTGLGGAP-WVL---PELRSLDLSGNTLT--ELPSTIFEELENVQSLNLSGNHLT 535
            |..:.||.|:|||:  .| |:|   |.||.|.|..|:||  |||..:              ||  
plant   446 LHVINLSNNKLTGV--FPYWLLEKYPNLRVLLLQNNSLTMLELPRLL--------------NH-- 492

  Fly   536 PLTGALFKPLDRLQVIDLSGCNIRQ-ISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSI 599
                       .||::|||..|..| :..::...|.:::|:.|::|..|.:...||..:.:|..:
plant   493 -----------TLQILDLSANNFDQRLPENIGKVLPNIRHLNLSNNGFQWILPSSFGEMKDIKFL 546

  Fly   600 DLS-NNRIGSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYF----------------NTGTGIEE- 646
            ||| ||..||:.....:....|..|.|..|:   |.|:.|                |..|||.: 
plant   547 DLSHNNFSGSLPMKFLIGCSSLHTLKLSYNK---FFGQIFPKQTNFGSLVVLIANNNLFTGIADG 608

  Fly   647 ---------LDISDNQL-------------SYLF----------PSSFRIHPRLREIRAANNKFS 679
                     ||:|:|.|             :|||          ||:....|..:.:..:.||||
plant   609 LRNVQSLGVLDLSNNYLQGVIPSWFGGFFFAYLFLSNNLLEGTLPSTLFSKPTFKILDLSGNKFS 673

  Fly   680 ------------------------FFPAELISTLQYLEHIDLSHNQLK-TIEELDFARLPRLRVL 719
                                    ..|:.||..:..|   ||.:|:|. ||..  |.:...:..|
plant   674 GNLPSHFTGMDMSLLYLNDNEFSGTIPSTLIKDVLVL---DLRNNKLSGTIPH--FVKNEFILSL 733

  Fly   720 LVANNQLDMVSEMAFHNSTQL------QILDLAHNNLDRIGERTFEGLVRLEQLNLE--GNRLS- 775
            |:..|.|      ..|..|.|      :|||||:|.|..........:....:||.|  |::|. 
plant   734 LLRGNTL------TGHIPTDLCGLRSIRILDLANNRLKGSIPTCLNNVSFGRRLNYEVNGDKLPF 792

  Fly   776 ELSD----GVFERTKL-----------QMLENINLA-HNRFEYAPLNALQRQFFFVSSVDLSHNK 824
            |::|    .|:.|..:           .::.|:..| .:|::    :..|..|.|:..:|||.| 
plant   793 EINDDEEFAVYSRLLVLPRQYSPDYTGVLMFNVEFASKSRYD----SYTQESFNFMFGLDLSSN- 852

  Fly   825 IKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVLNEPKTVRELSLAGTGIENLELLETPFLQFLNL 889
              ||.||                           .||               ||.:...::.|||
plant   853 --ELSGD---------------------------IPK---------------ELGDLQRIRALNL 873

  Fly   890 SHNKLKNVKPEVFQRVTLLETLDLSSNQLES--LEDLSMAWPQLQVLQSLDVSNNSFEIVSQSNF 952
            |||.|..:.|:.|..:|.:|::|||.|.|..  .:|||..  ...|:.::..:|.|..|.|...|
plant   874 SHNSLSGLIPQSFSNLTDIESIDLSFNLLRGPIPQDLSKL--DYMVVFNVSYNNLSGSIPSHGKF 936

  Fly   953 GKLE 956
            ..|:
plant   937 STLD 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 LRR_8 109..172 CDD:290566 25/64 (39%)
leucine-rich repeat 109..132 CDD:275380 6/24 (25%)
LRR_RI <132..338 CDD:238064 63/215 (29%)
leucine-rich repeat 133..161 CDD:275380 9/27 (33%)
LRR_8 160..220 CDD:290566 18/59 (31%)
leucine-rich repeat 162..185 CDD:275380 11/22 (50%)
leucine-rich repeat 186..209 CDD:275380 2/22 (9%)
leucine-rich repeat 210..233 CDD:275380 9/26 (35%)
LRR_8 232..290 CDD:290566 15/62 (24%)
leucine-rich repeat 234..257 CDD:275380 5/22 (23%)
leucine-rich repeat 258..281 CDD:275380 5/27 (19%)
LRR_RI 273..535 CDD:238064 74/273 (27%)
LRR_8 281..338 CDD:290566 20/57 (35%)
leucine-rich repeat 282..329 CDD:275380 16/47 (34%)
LRR_8 328..388 CDD:290566 19/59 (32%)
leucine-rich repeat 330..353 CDD:275380 8/22 (36%)
leucine-rich repeat 354..377 CDD:275380 6/22 (27%)
leucine-rich repeat 378..401 CDD:275380 3/22 (14%)
leucine-rich repeat 402..425 CDD:275380 3/22 (14%)
leucine-rich repeat 428..451 CDD:275380 6/22 (27%)
LRR_8 429..487 CDD:290566 15/57 (26%)
leucine-rich repeat 452..473 CDD:275380 5/20 (25%)
leucine-rich repeat 477..497 CDD:275378 9/20 (45%)
LRR_8 498..558 CDD:290566 18/61 (30%)
leucine-rich repeat 500..523 CDD:275380 10/24 (42%)
LRR_RI 502..769 CDD:238064 84/350 (24%)
leucine-rich repeat 524..547 CDD:275380 2/22 (9%)
leucine-rich repeat 548..571 CDD:275380 8/23 (35%)
LRR_8 572..630 CDD:290566 18/58 (31%)
leucine-rich repeat 572..595 CDD:275380 6/22 (27%)
leucine-rich repeat 596..619 CDD:275380 8/23 (35%)
LRR_8 619..678 CDD:290566 23/107 (21%)
leucine-rich repeat 620..643 CDD:275380 8/38 (21%)
leucine-rich repeat 644..667 CDD:275380 11/55 (20%)
LRR_8 666..726 CDD:290566 19/84 (23%)
leucine-rich repeat 668..691 CDD:275380 7/46 (15%)
leucine-rich repeat 692..715 CDD:275380 8/23 (35%)
LRR_8 714..774 CDD:290566 18/67 (27%)
leucine-rich repeat 716..739 CDD:275380 5/22 (23%)
leucine-rich repeat 740..761 CDD:275380 8/26 (31%)
leucine-rich repeat 764..789 CDD:275380 9/42 (21%)
leucine-rich repeat 790..810 CDD:275380 3/20 (15%)
leucine-rich repeat 818..850 CDD:275380 8/31 (26%)
leucine-rich repeat 863..883 CDD:275378 2/19 (11%)
LRR_RI <878..1070 CDD:238064 27/81 (33%)
LRR_8 884..944 CDD:290566 21/61 (34%)
LRR_4 884..925 CDD:289563 17/42 (40%)
leucine-rich repeat 884..907 CDD:275380 9/22 (41%)
leucine-rich repeat 908..933 CDD:275380 9/26 (35%)
leucine-rich repeat 934..955 CDD:275380 5/20 (25%)
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
TPKR_C2 1121..1168 CDD:301599
RLP9NP_001185260.1 LRRNT_2 32..68 CDD:285463
LRR_RI <92..240 CDD:238064 47/151 (31%)
LRR <120..>333 CDD:227223 72/251 (29%)
leucine-rich repeat 129..152 CDD:275380 6/25 (24%)
leucine-rich repeat 153..177 CDD:275380 9/27 (33%)
LRR_RI 170..383 CDD:238064 71/267 (27%)
leucine-rich repeat 178..200 CDD:275380 13/46 (28%)
leucine-rich repeat 201..228 CDD:275380 9/26 (35%)
leucine-rich repeat 229..277 CDD:275380 10/51 (20%)
leucine-rich repeat 278..300 CDD:275380 11/23 (48%)
leucine-rich repeat 301..323 CDD:275380 5/22 (23%)
LRR_8 322..380 CDD:290566 17/57 (30%)
leucine-rich repeat 324..347 CDD:275380 8/22 (36%)
leucine-rich repeat 348..371 CDD:275380 6/22 (27%)
leucine-rich repeat 372..396 CDD:275380 6/46 (13%)
LRR_RI 422..673 CDD:238064 74/284 (26%)
LRR_8 422..481 CDD:290566 21/62 (34%)
leucine-rich repeat 423..445 CDD:275380 5/23 (22%)
leucine-rich repeat 446..470 CDD:275380 10/25 (40%)
leucine-rich repeat 471..493 CDD:275380 12/48 (25%)
LRR_8 493..553 CDD:290566 19/59 (32%)
leucine-rich repeat 494..518 CDD:275380 8/23 (35%)
leucine-rich repeat 519..542 CDD:275380 6/22 (27%)
leucine-rich repeat 543..567 CDD:275380 8/23 (35%)
leucine-rich repeat 568..591 CDD:275380 7/25 (28%)
leucine-rich repeat 592..614 CDD:275380 4/21 (19%)
leucine-rich repeat 615..637 CDD:275380 5/21 (24%)
leucine-rich repeat 638..661 CDD:275380 5/22 (23%)
leucine-rich repeat 662..684 CDD:275380 4/21 (19%)
leucine-rich repeat 685..707 CDD:275380 3/21 (14%)
leucine-rich repeat 730..753 CDD:275380 7/28 (25%)
leucine-rich repeat 754..780 CDD:275380 7/25 (28%)
leucine-rich repeat 781..867 CDD:275380 27/134 (20%)
LRR_8 847..902 CDD:290566 27/99 (27%)
leucine-rich repeat 868..891 CDD:275380 9/22 (41%)
leucine-rich repeat 892..912 CDD:275380 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H95445
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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