DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG7896 and RKL1

DIOPT Version :9

Sequence 1:	NP_651754.1	Gene:	CG7896 / 43552	FlyBaseID:	FBgn0039728	Length:	1392	Species:	Drosophila melanogaster
Sequence 2:	NP_564528.1	Gene:	RKL1 / 841269	AraportID:	AT1G48480	Length:	655	Species:	Arabidopsis thaliana

Alignment Length:	237	Identity:	65/237 - (27%)
Similarity:	103/237 - (43%)	Gaps:	62/237 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   448 MFSSLHTLDLSGNSLAVINADTFA--GLESTL-----------------MALKLSQNRLTGLGGA 493
            :|.||..|.|...|...:|||..|  .|.|.:                 ..:|...||:|.|
plant    16 VFLSLLLLSLPLPSTQDLNADRTALLSLRSAVGGRTFRWNIKQTSPCNWAGVKCESNRVTAL--- 77

  Fly   494 PWVLPELRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQVIDLSGCNI 558
                 .|..:.|||    ::|..||..|..:::|:|   .|..|:|:|.|        |||..:
plant    78 -----RLPGVALSG----DIPEGIFGNLTQLRTLSL---RLNALSGSLPK--------DLSTSS- 121

  Fly   559 RQISGDLLAGLQDLKHIYLNDNQLQ-ELQDGSFVNLWNISSIDL-SNNRIGSIRSGAFVNVMKLQ 621
                        :|:|:||..|:.. |:.:..| :|.::..::| ||:..|.|.|| |.|:.||:
plant   122 ------------NLRHLYLQGNRFSGEIPEVLF-SLSHLVRLNLASNSFTGEISSG-FTNLTKLK 172

  Fly   622 KLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFR 663
            .|.|..||||   |...:....:.:.::|:|.|:...|.:.:
plant   173 TLFLENNQLS---GSIPDLDLPLVQFNVSNNSLNGSIPKNLQ 211

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG7896	NP_651754.1	LRR_8	109..172	CDD:290566
		leucine-rich repeat	109..132	CDD:275380
		LRR_RI	<132..338	CDD:238064
		leucine-rich repeat	133..161	CDD:275380
		LRR_8	160..220	CDD:290566
		leucine-rich repeat	162..185	CDD:275380
		leucine-rich repeat	186..209	CDD:275380
		leucine-rich repeat	210..233	CDD:275380
		LRR_8	232..290	CDD:290566
		leucine-rich repeat	234..257	CDD:275380
		leucine-rich repeat	258..281	CDD:275380
		LRR_RI	273..535	CDD:238064	27/105 (26%)
		LRR_8	281..338	CDD:290566
		leucine-rich repeat	282..329	CDD:275380
		LRR_8	328..388	CDD:290566
		leucine-rich repeat	330..353	CDD:275380
		leucine-rich repeat	354..377	CDD:275380
		leucine-rich repeat	378..401	CDD:275380
		leucine-rich repeat	402..425	CDD:275380
		leucine-rich repeat	428..451	CDD:275380	1/2 (50%)
		LRR_8	429..487	CDD:290566	14/57 (25%)
		leucine-rich repeat	452..473	CDD:275380	8/22 (36%)
		leucine-rich repeat	477..497	CDD:275378	5/36 (14%)
		LRR_8	498..558	CDD:290566	18/59 (31%)
		leucine-rich repeat	500..523	CDD:275380	8/22 (36%)
		LRR_RI	502..769	CDD:238064	47/164 (29%)
		leucine-rich repeat	524..547	CDD:275380	7/22 (32%)
		leucine-rich repeat	548..571	CDD:275380	3/22 (14%)
		LRR_8	572..630	CDD:290566	22/59 (37%)
		leucine-rich repeat	572..595	CDD:275380	8/23 (35%)
		leucine-rich repeat	596..619	CDD:275380	9/23 (39%)
		LRR_8	619..678	CDD:290566	13/45 (29%)
		leucine-rich repeat	620..643	CDD:275380	8/22 (36%)
		leucine-rich repeat	644..667	CDD:275380	4/20 (20%)
		LRR_8	666..726	CDD:290566
		leucine-rich repeat	668..691	CDD:275380
		leucine-rich repeat	692..715	CDD:275380
		LRR_8	714..774	CDD:290566
		leucine-rich repeat	716..739	CDD:275380
		leucine-rich repeat	740..761	CDD:275380
		leucine-rich repeat	764..789	CDD:275380
		leucine-rich repeat	790..810	CDD:275380
		leucine-rich repeat	818..850	CDD:275380
		leucine-rich repeat	863..883	CDD:275378
		LRR_RI	<878..1070	CDD:238064
		LRR_8	884..944	CDD:290566
		LRR_4	884..925	CDD:289563
		leucine-rich repeat	884..907	CDD:275380
		leucine-rich repeat	908..933	CDD:275380
		leucine-rich repeat	934..955	CDD:275380
		leucine-rich repeat	958..982	CDD:275380
		leucine-rich repeat	983..1055	CDD:275380
		leucine-rich repeat	1009..1033	CDD:275380
		leucine-rich repeat	1058..1085	CDD:275380
		TPKR_C2	1121..1168	CDD:301599
RKL1	NP_564528.1	LRRNT_2	33..69	CDD:285463	6/35 (17%)
		LRR_8	73..133	CDD:290566	26/95 (27%)
		leucine-rich repeat	99..122	CDD:275380	10/46 (22%)
		LRR_8	121..181	CDD:290566	22/74 (30%)
		leucine-rich repeat	123..146	CDD:275380	8/23 (35%)
		leucine-rich repeat	147..170	CDD:275380	9/23 (39%)
		leucine-rich repeat	171..192	CDD:275380	8/23 (35%)
		STYKc	375..639	CDD:214568
		STKc_IRAK	377..642	CDD:270968
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000