DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and RLP1

DIOPT Version :9

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001154318.1 Gene:RLP1 / 837251 AraportID:AT1G07390 Length:1083 Species:Arabidopsis thaliana


Alignment Length:1112 Identity:267/1112 - (24%)
Similarity:426/1112 - (38%) Gaps:333/1112 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VAMDCDRVVFHGDAPQLPYGAPIVAYTQRHSGQQVLPAQTFGQLKLTIEELDLSYNLIRRIPE-- 123
            :.:..||:|            |:...:|..|....| ..:|.||    :.|:||:|....:.:  
plant    54 IGLSLDRLV------------PVAFESQTRSLNLSL-LHSFPQL----QSLNLSWNWFTNLSDHF 101

  Fly   124 ---KAFDGLKDSLNELRLANNLLGDNLNPIFSTAELHVLKNLRLLDLSGNKIKLIEEGLLKGCMD 185
               |:| |..|.|..|..::|:..:::.|..:.|     .::|.|.|..|.:    ||:.     
plant   102 LGFKSF-GTLDKLTTLDFSHNMFDNSIVPFLNAA-----TSIRSLHLESNYM----EGVF----- 151

  Fly   186 LKEFYIDRNSLTSVPTNSLNGPSALRHLSLRQNQIGSLLADSFNAQRQLEIIDLRHNVIRSID-- 248
                          |...|:..:.||.|:|:.|....|.:......|.||::||..|.:...:  
plant   152 --------------PPQELSNMTNLRVLNLKDNSFSFLSSQGLTDFRDLEVLDLSFNGVNDSEAS 202

  Fly   249 -SLA-------------------FKGLQKIRE---IKLAGNRISH-LNSDVFEKLQSLQKLDLSE 289
             ||:                   .|||:.::|   :||.||:.:| |::.|.:.|:.||:||||:
plant   203 HSLSTAKLKTLDLNFNPLSDFSQLKGLESLQELQVLKLRGNKFNHTLSTHVLKDLKMLQELDLSD 267

  Fly   290 NFFGQFPTVALAAVPGLKH----------------------------LNLSSNM----------- 315
            |.|           ..|.|                            |.||..|           
plant   268 NGF-----------TNLDHGRDVDESRSEKRFDFREVVQKVETLWIGLRLSFQMSITHHKSVTVG 321

  Fly   316 ------------LQQLDYTHMQV------------VRSLESLDISRNTITTITPGTFREMGALKY 356
                        ||.||:...|:            :..|..||:|.|.:|:: |.....:..|:.
plant   322 GNGFLGLEIPTSLQVLDFKRNQLSLTHEGYLGICRLMKLRELDLSSNALTSL-PYCLGNLTHLRT 385

  Fly   357 LDLSLNSLRTIEDDALEGLDS-LQTLIIKDNNILLVPGS----ALGRLPQLTSLQLDYNRVAALS 416
            ||||.|.|.......:.||.| |:.|.:.|||.   .||    :|....:||..:|. ::|..:.
plant   386 LDLSNNQLNGNLSSFVSGLPSVLEYLSLLDNNF---DGSFLFNSLVNQTRLTVFKLS-SKVGVIQ 446

  Fly   417 AEI-------------------LGSLQAG------DITTLSLSRNVIRELPPGSFQMF-----SS 451
            .:.                   |||...|      |:..:.||.|.:    .|:|..:     :.
plant   447 VQTESSWAPLFQLKMLYLSNCSLGSTMLGFLVHQRDLCFVDLSHNKL----TGTFPTWLVKNNTR 507

  Fly   452 LHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRL-----TGLGGAPWVLPELRSLDLSGNTLT 511
            |.|:.||||||..:....   |...|..|.:|.|.:     ..:|   .|.|.||.::.|.|...
plant   508 LQTILLSGNSLTKLQLPI---LVHGLQVLDISSNMIYDSIQEDIG---MVFPNLRFMNFSSNHFQ 566

  Fly   512 -ELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQVIDLSGC---NIRQISGDLLAGLQDL 572
             .:||:| .|::::|.|::|.|.|          ..:|.::.||||   .:.::|.:.|.|....
plant   567 GTIPSSI-GEMKSLQVLDMSSNGL----------YGQLPIMFLSGCYSLRVLKLSNNQLQGKIFS 620

  Fly   573 KH--------IYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHGNQ 629
            ||        ::|:.|......:...:...|::.:|:|:||...:.......:.:|..|.:.|||
plant   621 KHANLTGLVGLFLDGNNFTGSLEEGLLKSKNLTLLDISDNRFSGMLPLWIGRISRLSYLYMSGNQ 685

  Fly   630 LSAFKG--EYFNTGTGIEELDISDNQLSYLFPSSFRIHPRLREIRAANNKFS-FFPAELISTLQY 691
            |   ||  .:......:|.:|||.|..|...|.:... |.|||:|..||:|: ..|..|..... 
plant   686 L---KGPFPFLRQSPWVEVMDISHNSFSGSIPRNVNF-PSLRELRLQNNEFTGLVPGNLFKAAG- 745

  Fly   692 LEHIDLSHNQ-----LKTIEELDFARLPRLRVLLVANNQLDMVSEMAFHNSTQLQILDLAHNNL- 750
            ||.:||.:|.     |.||::..     :||:||:.||.............:::.:|||:||.. 
plant   746 LEVLDLRNNNFSGKILNTIDQTS-----KLRILLLRNNSFQTYIPGKICQLSEVGLLDLSHNQFR 805

  Fly   751 -----------------DR----IGERTFEGLVRLEQLNLEGNRLSELSDGVFERTKLQMLENIN 794
                             ||    :.:..|..:..|..... |:.|: |.|||             
plant   806 GPIPSCFSKMSFGAEQNDRTMSLVADFDFSYITFLPHCQY-GSHLN-LDDGV------------- 855

  Fly   795 LAHNRFEYAPLNALQRQFFFVSSVDLSHNKIKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVLNE 859
                |..|.|..|....|       |:.::.:...||  |:..:..:|||.|.||.         
plant   856 ----RNGYQPKPATVVDF-------LTKSRYEAYQGD--ILRYMHGLDLSSNELSG--------- 898

  Fly   860 PKTVRELSLAGTGIENLELLETPFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDL 924
                 |:.:....::|        ::.||||.|:|....|:...::..||:||||:|:|:.  .:
plant   899 -----EIPIEIGDLQN--------IRSLNLSSNRLTGSIPDSISKLKGLESLDLSNNKLDG--SI 948

  Fly   925 SMAWPQLQVLQSLDVSNN--SFEIVSQSN---FGKLEMLRSLRLSHLPQCTRIEKNAFKQL---P 981
            ..|...|..|..|::|.|  |.||..:.:   |.:...:.:..|..||    ..||...|.   |
plant   949 PPALADLNSLGYLNISYNNLSGEIPFKGHLVTFDERSYIGNAHLCGLP----TNKNCISQRVPEP 1009

  Fly   982 NLVSLEA 988
            ..||..|
plant  1010 PSVSTHA 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 LRR_8 109..172 CDD:290566 17/67 (25%)
leucine-rich repeat 109..132 CDD:275380 7/27 (26%)
LRR_RI <132..338 CDD:238064 62/294 (21%)
leucine-rich repeat 133..161 CDD:275380 5/27 (19%)
LRR_8 160..220 CDD:290566 13/59 (22%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
leucine-rich repeat 186..209 CDD:275380 2/22 (9%)
leucine-rich repeat 210..233 CDD:275380 6/22 (27%)
LRR_8 232..290 CDD:290566 26/83 (31%)
leucine-rich repeat 234..257 CDD:275380 10/44 (23%)
leucine-rich repeat 258..281 CDD:275380 9/26 (35%)
LRR_RI 273..535 CDD:238064 88/365 (24%)
LRR_8 281..338 CDD:290566 23/119 (19%)
leucine-rich repeat 282..329 CDD:275380 19/109 (17%)
LRR_8 328..388 CDD:290566 21/60 (35%)
leucine-rich repeat 330..353 CDD:275380 7/22 (32%)
leucine-rich repeat 354..377 CDD:275380 9/22 (41%)
leucine-rich repeat 378..401 CDD:275380 8/26 (31%)
leucine-rich repeat 402..425 CDD:275380 7/41 (17%)
leucine-rich repeat 428..451 CDD:275380 5/27 (19%)
LRR_8 429..487 CDD:290566 18/62 (29%)
leucine-rich repeat 452..473 CDD:275380 8/20 (40%)
leucine-rich repeat 477..497 CDD:275378 5/24 (21%)
LRR_8 498..558 CDD:290566 19/63 (30%)
leucine-rich repeat 500..523 CDD:275380 8/23 (35%)
LRR_RI 502..769 CDD:238064 76/308 (25%)
leucine-rich repeat 524..547 CDD:275380 5/22 (23%)
leucine-rich repeat 548..571 CDD:275380 8/25 (32%)
LRR_8 572..630 CDD:290566 13/65 (20%)
leucine-rich repeat 572..595 CDD:275380 4/30 (13%)
leucine-rich repeat 596..619 CDD:275380 4/22 (18%)
LRR_8 619..678 CDD:290566 22/60 (37%)
leucine-rich repeat 620..643 CDD:275380 8/24 (33%)
leucine-rich repeat 644..667 CDD:275380 7/22 (32%)
LRR_8 666..726 CDD:290566 24/65 (37%)
leucine-rich repeat 668..691 CDD:275380 9/23 (39%)
leucine-rich repeat 692..715 CDD:275380 8/27 (30%)
LRR_8 714..774 CDD:290566 16/81 (20%)
leucine-rich repeat 716..739 CDD:275380 6/22 (27%)
leucine-rich repeat 740..761 CDD:275380 8/42 (19%)
leucine-rich repeat 764..789 CDD:275380 7/24 (29%)
leucine-rich repeat 790..810 CDD:275380 4/19 (21%)
leucine-rich repeat 818..850 CDD:275380 9/31 (29%)
leucine-rich repeat 863..883 CDD:275378 2/19 (11%)
LRR_RI <878..1070 CDD:238064 35/119 (29%)
LRR_8 884..944 CDD:290566 21/61 (34%)
LRR_4 884..925 CDD:289563 15/40 (38%)
leucine-rich repeat 884..907 CDD:275380 7/22 (32%)
leucine-rich repeat 908..933 CDD:275380 10/24 (42%)
leucine-rich repeat 934..955 CDD:275380 8/25 (32%)
leucine-rich repeat 958..982 CDD:275380 6/26 (23%)
leucine-rich repeat 983..1055 CDD:275380 3/6 (50%)
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
TPKR_C2 1121..1168 CDD:301599
RLP1NP_001154318.1 LRR_RI 76..>274 CDD:238064 59/242 (24%)
leucine-rich repeat 84..112 CDD:275380 8/32 (25%)
leucine-rich repeat 113..136 CDD:275380 5/27 (19%)
LRR_8 135..194 CDD:290566 19/81 (23%)
leucine-rich repeat 137..161 CDD:275380 8/46 (17%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
leucine-rich repeat 186..209 CDD:275380 7/22 (32%)
LRR_8 209..270 CDD:290566 19/60 (32%)
leucine-rich repeat 210..231 CDD:275380 3/20 (15%)
LRR_RI 211..494 CDD:238064 68/302 (23%)
leucine-rich repeat 232..259 CDD:275380 9/26 (35%)
leucine-rich repeat 260..333 CDD:275380 14/83 (17%)
leucine-rich repeat 334..359 CDD:275380 5/24 (21%)
LRR_8 359..418 CDD:290566 21/59 (36%)
leucine-rich repeat 360..382 CDD:275380 7/22 (32%)
leucine-rich repeat 408..429 CDD:275380 8/23 (35%)
leucine-rich repeat 433..455 CDD:275380 4/22 (18%)
leucine-rich repeat 459..482 CDD:275380 4/22 (18%)
leucine-rich repeat 483..507 CDD:275380 5/27 (19%)
leucine-rich repeat 508..529 CDD:275380 9/23 (39%)
leucine-rich repeat 530..554 CDD:275380 6/26 (23%)
leucine-rich repeat 555..578 CDD:275380 8/23 (35%)
leucine-rich repeat 579..603 CDD:275380 10/33 (30%)
leucine-rich repeat 604..651 CDD:275380 7/46 (15%)
LRR_RI <638..>810 CDD:238064 49/181 (27%)
leucine-rich repeat 652..675 CDD:275380 4/22 (18%)
leucine-rich repeat 676..721 CDD:275380 15/48 (31%)
LRR_8 720..780 CDD:290566 24/65 (37%)
leucine-rich repeat 722..745 CDD:275380 9/22 (41%)
leucine-rich repeat 746..769 CDD:275380 8/27 (30%)
leucine-rich repeat 770..791 CDD:275380 6/20 (30%)
leucine-rich repeat 794..815 CDD:275380 5/20 (25%)
leucine-rich repeat 883..909 CDD:275380 7/39 (18%)
LRR_8 909..968 CDD:290566 22/68 (32%)
leucine-rich repeat 910..933 CDD:275380 7/22 (32%)
leucine-rich repeat 934..957 CDD:275380 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H95445
Inparanoid 1 1.050 152 1.000 Inparanoid score I1699
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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