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Protein Alignment CG7896 and RLP56

DIOPT Version :9

Sequence 1:	NP_651754.1	Gene:	CG7896 / 43552	FlyBaseID:	FBgn0039728	Length:	1392	Species:	Drosophila melanogaster
Sequence 2:	NP_001330457.1	Gene:	RLP56 / 834989	AraportID:	AT5G49290	Length:	947	Species:	Arabidopsis thaliana

Alignment Length:	915	Identity:	221/915 - (24%)
Similarity:	353/915 - (38%)	Gaps:	274/915 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   131 DSLNELRLANNLLGDNLNPIFSTAELHVLKNLRLLDLSGNKIKLIEEGLLKGCMDLKEFYIDRNS 195
            :.:..|.|:|:.|...::.:.....|..|:||::|:.|.|:........|.....|....:.||:
plant   106 EEVRSLDLSNSRLNGLVDDVEGYKSLRRLRNLQILNFSSNEFNNSIFPFLNAATSLTTLSLRRNN 170

  Fly   196 LTS-VPTNSLNGPSALRHLSLRQNQI-GSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKI 258
            :.. :|...|...:.|..|.|..|:| ||:....|...::|:.:||..|.|.|  |:.::||:.:
plant   171 MYGPIPLKELKNLTNLELLDLSGNRIDGSMPVREFPYLKKLKALDLSSNGIYS--SMEWQGLKNL 233

  Fly   259 REIKLAGNRISHLNS----DVFEKLQSLQKLDL-SENFFGQFPTVALAAVPGLKHLNLSSNMLQQ 318
            ..:::.....::.:.    :||.::::||:||| ..||.||.|         |...||:
plant   234 TNLEVLSLGYNYFDGPIPIEVFCEMKNLQELDLRGINFVGQLP---------LCFGNLN------ 283

  Fly   319 LDYTHMQVVRSLESLDISRNTITTITPGTFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLI- 382
                      .|..||:|.|.:|...|.:|..:.:|:||.||        |::.||..||..|.
plant   284 ----------KLRFLDLSSNQLTGNIPPSFSSLESLEYLSLS--------DNSFEGFFSLNPLTN 330

  Fly   383 ----------IKDNNILLVPGSALGRLPQLTSLQLDYNRVAALSAEILGSLQAGDITTLSLSRNV 437
                      .||:.:.:...|....|.||:.|.|   |:.:|
plant   331 LTKLKVFIFSSKDDMVQVKIESTWQPLFQLSVLVL---RLCSL---------------------- 370

  Fly   438 IRELPPGSFQMF-SSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRLTGLGGAP-WVL--- 497
             .::|  :|.|: .:||.:||||                         ||::|:  .| |:|
plant   371 -EKIP--NFLMYQKNLHVVDLSG-------------------------NRISGI--IPTWLLENN 405

  Fly   498 PELRSLDLSGNTLT--ELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQVIDLSGCNIRQ 560
            |||..|.|..|:.|  ::|:::    .|:|.|:.|.|::    |.||..            |..:
plant   406 PELEVLQLKNNSFTIFQMPTSV----HNLQVLDFSENNI----GGLFPD------------NFGR 450

  Fly   561 ISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLS-NNRIGSIRSGAFVNVMKLQKLD 624
            :       |.:|.|:..::|..|.....|...::|||.:||| ||..|.:......:...|..|.
plant   451 V-------LPNLVHMNGSNNGFQGNFPSSMGEMYNISFLDLSYNNLSGELPQSFVSSCFSLSILQ 508

  Fly   625 LHGNQLSA---------------------FKG--------------------------------- 635
            |..|:.|.                     |.|
plant   509 LSHNKFSGHFLPRQTNFTSLIVLRINNNLFTGKIGVGLLTLVDLCILDMSNNFLEGELPPLLLVF 573

  Fly   636 EYFNTGTGIEELDISDNQLSYLFPSSFRIHPRLREIR-AANNKFSF-FPAELISTLQYLEHIDLS 698
            ||.|.      ||:|.|.||...||    |..|..:. ..||.|:. .|...:.::|.|   ||.
plant   574 EYLNF------LDLSGNLLSGALPS----HVSLDNVLFLHNNNFTGPIPDTFLGSIQIL---DLR 625

  Fly   699 HNQLK-TIEELDFARLPRLRVLLVANNQLDMVSEMAFHNSTQLQILDLAHNNLDRIGERTFE--- 759
            :|:|. .|.:  |.....:..||:..|.|...........:::::|||:.|.|:......|.
plant   626 NNKLSGNIPQ--FVDTQDISFLLLRGNSLTGYIPSTLCEFSKMRLLDLSDNKLNGFIPSCFNNLS 688

  Fly   760 -GLVRLEQLN-------LEGNRLSELSDGVFERTKLQMLENINLAH-NRFEY-APLNALQRQFFF 814
             ||.|.|::.       ||...|     |.::.|  .::||..|.: |.||. ......||...:
plant   689 FGLARKEEITNYYVAVALESFYL-----GFYKST--FVVENFRLDYSNYFEIDVKFATKQRYDSY 746

  Fly   815 VSSVDLSHNKIKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVLNEPKTVRELSLAGTGIENLELL 879
            :.:...|...:..:.|          :|||.|.||                      |:...||.
plant   747 IGAFQFSEGTLNSMYG----------LDLSSNELS----------------------GVIPAELG 779

  Fly   880 ETPFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDLSMAWP-QLQVLQSLDVSNNS 943
            :...|:.||||||.|.:..|:.|.::..:|:||||.|.|:.      :.| ||..|.||.:.|.|
plant   780 DLFKLRALNLSHNFLSSHIPDSFSKLQDIESLDLSYNMLQG------SIPHQLTNLTSLAIFNVS 838

  Fly   944 FEIVS 948
            :..:|
plant   839 YNNLS 843

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.