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Protein Alignment CG7896 and GHR1

DIOPT Version :9

Sequence 1:	NP_651754.1	Gene:	CG7896 / 43552	FlyBaseID:	FBgn0039728	Length:	1392	Species:	Drosophila melanogaster
Sequence 2:	NP_001320016.1	Gene:	GHR1 / 827842	AraportID:	AT4G20940	Length:	1037	Species:	Arabidopsis thaliana

Alignment Length:	732	Identity:	175/732 - (23%)
Similarity:	271/732 - (37%)	Gaps:	219/732 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   184 MDLKEFYIDRNSLTSVPT----NSLNG--------PSALRHLSLRQNQIGSLLADSFNAQRQLEI 236
            |.|.||   :..:...||    ||.|.        ||:...:......:..::.|:.
plant    10 MALLEF---KKGIKHDPTGFVLNSWNDESIDFNGCPSSWNGIVCNGGNVAGVVLDNL-------- 63

  Fly   237 IDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFEKLQSLQKLDLSENFFGQFPTVALA 301
                 .:....|...|..|.|:.::.::.|.:|.:..:.....:|||.||||:|.|.......:.
plant    64 -----GLTADADFSLFSNLTKLVKLSMSNNSLSGVLPNDLGSFKSLQFLDLSDNLFSSSLPKEIG 123

  Fly   302 AVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREMGALKYLDLSLNSLRT 366
            ....|::|:||.|.........|..:.||:|||:|.|:::...|.:...:..|.||:||.|....
plant   124 RSVSLRNLSLSGNNFSGEIPESMGGLISLQSLDMSSNSLSGPLPKSLTRLNDLLYLNLSSNGFTG 188

  Fly   367 IEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTS---LQLDYNRVAALSAEILGSLQAGDI 428
            ......|.:.||:.|.:..|:|   .|:..|....||:   :.:..||:...|.::|..: :..|
plant   189 KMPRGFELISSLEVLDLHGNSI---DGNLDGEFFLLTNASYVDISGNRLVTTSGKLLPGV-SESI 249

  Fly   429 TTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLEST--LMALKLSQNRLTGLG 491
            ..|:||.|.:.......||:|.:|..||||.|.|    :....|....  |..||||.||.:|
plant   250 KHLNLSHNQLEGSLTSGFQLFQNLKVLDLSYNML----SGELPGFNYVYDLEVLKLSNNRFSG-- 308

  Fly   492 GAPWVLPE---------LRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTP----LTGALFK 543
                .||.         |.:||||||.|:...|:|..  ..:.:|:||.|.||.    |||
plant   309 ----SLPNNLLKGDSLLLTTLDLSGNNLSGPVSSIMS--TTLHTLDLSSNSLTGELPLLTG---- 363

  Fly   544 PLDRLQVIDLSGCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGS 608
                       ||.:                                        :|||||:
plant   364 -----------GCVL----------------------------------------LDLSNNQ--- 374

  Fly   609 IRSGAFVNVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIHPRLREIRA 673
                            ..||.....|.|      .||.||:|.|..:..||.:   .|:|  :||
plant   375 ----------------FEGNLTRWSKWE------NIEYLDLSQNHFTGSFPDA---TPQL--LRA 412

  Fly   674 ANNKFSFFPAELISTLQYLEHIDLSHNQLK-TIEELDFARLPRLRVLLVANNQLD---------- 727
                               .|::||:|:|. ::.|......|:||||.:::|.|:
plant   413 -------------------NHLNLSYNKLTGSLPERIPTHYPKLRVLDISSNSLEGPIPGALLSM 458

  Fly   728 -MVSEMAFHNS-------------TQLQILDLAHNNLDRIGERTFEGLVRLEQLNLEGNRLSELS 778
             .:.|:...|:             :::::|||:||..|......|..|..|:.|||..|.||
plant   459 PTLEEIHLQNNGMTGNIGPLPSSGSRIRLLDLSHNRFDGDLPGVFGSLTNLQVLNLAANNLS--- 520

  Fly   779 DGVFERTKLQMLENINLAHNRFEYAPLNALQRQFFFVSSVDLSHNKIKELPGDDSIMVNIKRIDL 843
                                    ..|.:.......:||:|:|.|.... |...::..||...::
plant   521 ------------------------GSLPSSMNDIVSLSSLDVSQNHFTG-PLPSNLSSNIMAFNV 560

  Fly   844 SFNPLSSKAVHNVLNEP 860
            |:|.||.....|:.|.|
plant   561 SYNDLSGTVPENLKNFP 577

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.