DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and RLP40

DIOPT Version :9

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_566757.2 Gene:RLP40 / 822091 AraportID:AT3G24982 Length:915 Species:Arabidopsis thaliana


Alignment Length:952 Identity:242/952 - (25%)
Similarity:384/952 - (40%) Gaps:186/952 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 IFSTAELHVLKNLRLLDLSGNKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALRHLS 214
            :|..:||....|..||             ||..|:....|:...|.:..:   ...||..::..:
plant    29 VFIMSELLFSLNFLLL-------------LLLSCVSPSSFFTFNNPVVGL---GACGPHQIQAFT 77

  Fly   215 LRQNQI------------GSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNR 267
            ..:|:.            |....||..|...|::.......::...|| |: ...:|.:.|..|.
plant    78 QFKNEFDTRACNHSDPWNGVWCDDSTGAVTMLQLRACLSGTLKPNSSL-FQ-FHHLRSLLLPHNN 140

  Fly   268 ISHLN-SDVFEKLQSLQKLDLSENFFGQFPTVALAAVP-GLKHLN-LSSNMLQQLDYT----HMQ 325
            .:..: |..|..|.:|:.|.||.:.|       ||.|| ...:|: ||:.:|...|.|    ..:
plant   141 FTSSSISSKFGMLNNLEVLSLSSSGF-------LAQVPFSFSNLSMLSALVLSNNDLTGSLSFAR 198

  Fly   326 VVRSLESLDISRNTITTI-TP-GTFREMGALKYLDLSLNSLRTIEDDALE--GLDSLQTLIIKDN 386
            .:|.|..||:|.|..:.| .| .:..|:..:.||:|..|:. |......|  .|:.|:.|.:..|
plant   199 NLRKLRVLDVSYNHFSGILNPNSSLFELHHIIYLNLRYNNF-TSSSLPYEFGNLNKLEVLDVSSN 262

  Fly   387 NILLVPGSALGRLPQLTSLQLDYNRVAALSAEILGSLQ-AGDITTLS---LSRNVIRELPPGSFQ 447
            :........:..|.|||.|.|..|       ...|||. ..::|.||   |..|......|.|..
plant   263 SFFGQVPPTISNLTQLTELYLPLN-------HFTGSLPLVQNLTKLSILHLFGNHFSGTIPSSLF 320

  Fly   448 MFSSLHTLDLSGN----SLAVINADTFAGLESTLMALKLSQNRLTGLGGAP-WVLPELRSLDLSG 507
            ....|..|.|.||    |:.|.|:.:.:.|||    |.|.:|...|....| ..|..|:.||||.
plant   321 TMPFLSYLSLKGNNLNGSIEVPNSSSSSRLES----LHLGENHFEGKILEPISKLINLKELDLSF 381

  Fly   508 -NTLTELPSTIFEELENVQSLNLSGNHLT--PLTGALFKPLDRLQVIDLSGCNIRQISGDLLAGL 569
             ||...:..::|..|:::..|:|||:.::  .||...:.| ..|:|:.|..|:|.... ::...|
plant   382 LNTSYPIDLSLFSSLKSLLLLDLSGDWISKASLTLDSYIP-STLEVLRLEHCDISDFP-NVFKTL 444

  Fly   570 QDLKHIYLNDNQLQELQDGSFVN-LWN---ISSIDLSNNRIGSIRSGAFVNV-MKLQKLDLHGNQ 629
            .:|::|.|::|::    .|.|.. ||:   :||:.:::|.:......:.|.| ..:|.|.|..|.
plant   445 HNLEYIALSNNRI----SGKFPEWLWSLPRLSSVFITDNLLTGFEGSSEVLVNSSVQILSLDTNS 505

  Fly   630 LSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIHPRLREIRAANNKFSFFPAELISTLQYLEH 694
            |   :|...:....|......||:.....|.|......|..:..:.|.|:......:|.|.||: 
plant   506 L---EGALPHLPLSINYFSAIDNRFGGDIPLSICNRSSLDVLDLSYNNFTGPIPPCLSNLLYLK- 566

  Fly   695 IDLSHNQLK-TIEELDFARLPRLRVLLVANNQLDMVSEMAFHNSTQLQILDLAHNNLDRIGERTF 758
              |..|.|: :|.:..:...| ||.|.|..|:|......:..|.:.||.|.:.||.:......:.
plant   567 --LRKNNLEGSIPDKYYEDTP-LRSLDVGYNRLTGKLPRSLINCSALQFLSVDHNGIKDTFPFSL 628

  Fly   759 EGLVRLEQLNLEGNR----LSELSDGVFERTKLQMLENINLAHNRFEYAPLNALQRQFFFVSSVD 819
            :.|.:|:.|.|..|:    ||..::|.....:|::||   :|.|:...:.|::    .|||:...
plant   629 KALPKLQVLLLSSNKFYGPLSPPNEGPLGFPELRILE---IAGNKLTGSFLSS----DFFVNWKA 686

  Fly   820 LSHNKIKELPGDDSIMVNIK------------RIDLSFNPLSSKAVHNVLNEPKTVRELS---LA 869
            .||...::|   ...||..|            .|||.:..||.:. .|||....|: :.|   |.
plant   687 SSHTMNEDL---GLYMVYGKVIFGNYHLTYYETIDLRYKGLSMEQ-RNVLTSSATI-DFSGNRLE 746

  Fly   870 GTGIENLELLETPFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQL-----ESLEDLSMAWP 929
            |...|::.||:.  |..||||:|......|..|..:..:|:||||||||     ..|..||.   
plant   747 GEIPESIGLLKA--LIALNLSNNAFTGHIPLSFANLKKMESLDLSSNQLSGTIPNGLRTLSF--- 806

  Fly   930 QLQVLQSLDVSNNSFEIVSQSNFGKLEMLRSLRLSHLPQCTRI---EKNAFKQLPNLVSLEAYDL 991
                |..::||:|..                  :..:||.|:|   .|::|:             
plant   807 ----LAYVNVSHNQL------------------IGEIPQGTQITGQPKSSFE------------- 836

  Fly   992 PLLGYLDLQGILELLPGLEVLDIEVKDSSIGSEQIQPLKHPR 1033
               |...|.|            ..:::|..|: ...|.:||:
plant   837 ---GNAGLCG------------FPLQESCFGT-NTPPAQHPK 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 LRR_8 109..172 CDD:290566 6/21 (29%)
leucine-rich repeat 109..132 CDD:275380
LRR_RI <132..338 CDD:238064 48/206 (23%)
leucine-rich repeat 133..161 CDD:275380 3/10 (30%)
LRR_8 160..220 CDD:290566 11/59 (19%)
leucine-rich repeat 162..185 CDD:275380 5/22 (23%)
leucine-rich repeat 186..209 CDD:275380 4/22 (18%)
leucine-rich repeat 210..233 CDD:275380 5/34 (15%)
LRR_8 232..290 CDD:290566 14/58 (24%)
leucine-rich repeat 234..257 CDD:275380 4/22 (18%)
leucine-rich repeat 258..281 CDD:275380 6/23 (26%)
LRR_RI 273..535 CDD:238064 84/281 (30%)
LRR_8 281..338 CDD:290566 20/62 (32%)
leucine-rich repeat 282..329 CDD:275380 15/52 (29%)
LRR_8 328..388 CDD:290566 19/63 (30%)
leucine-rich repeat 330..353 CDD:275380 8/24 (33%)
leucine-rich repeat 354..377 CDD:275380 7/24 (29%)
leucine-rich repeat 378..401 CDD:275380 4/22 (18%)
leucine-rich repeat 402..425 CDD:275380 8/23 (35%)
leucine-rich repeat 428..451 CDD:275380 7/25 (28%)
LRR_8 429..487 CDD:290566 21/64 (33%)
leucine-rich repeat 452..473 CDD:275380 8/24 (33%)
leucine-rich repeat 477..497 CDD:275378 5/20 (25%)
LRR_8 498..558 CDD:290566 20/62 (32%)
leucine-rich repeat 500..523 CDD:275380 9/23 (39%)
LRR_RI 502..769 CDD:238064 72/275 (26%)
leucine-rich repeat 524..547 CDD:275380 7/24 (29%)
leucine-rich repeat 548..571 CDD:275380 6/22 (27%)
LRR_8 572..630 CDD:290566 17/62 (27%)
leucine-rich repeat 572..595 CDD:275380 7/23 (30%)
leucine-rich repeat 596..619 CDD:275380 5/23 (22%)
LRR_8 619..678 CDD:290566 13/58 (22%)
leucine-rich repeat 620..643 CDD:275380 6/22 (27%)
leucine-rich repeat 644..667 CDD:275380 5/22 (23%)
LRR_8 666..726 CDD:290566 17/60 (28%)
leucine-rich repeat 668..691 CDD:275380 5/22 (23%)
leucine-rich repeat 692..715 CDD:275380 5/23 (22%)
LRR_8 714..774 CDD:290566 18/63 (29%)
leucine-rich repeat 716..739 CDD:275380 7/22 (32%)
leucine-rich repeat 740..761 CDD:275380 5/20 (25%)
leucine-rich repeat 764..789 CDD:275380 8/28 (29%)
leucine-rich repeat 790..810 CDD:275380 5/19 (26%)
leucine-rich repeat 818..850 CDD:275380 10/43 (23%)
leucine-rich repeat 863..883 CDD:275378 6/22 (27%)
LRR_RI <878..1070 CDD:238064 40/164 (24%)
LRR_8 884..944 CDD:290566 24/64 (38%)
LRR_4 884..925 CDD:289563 18/45 (40%)
leucine-rich repeat 884..907 CDD:275380 8/22 (36%)
leucine-rich repeat 908..933 CDD:275380 12/29 (41%)
leucine-rich repeat 934..955 CDD:275380 4/20 (20%)
leucine-rich repeat 958..982 CDD:275380 6/26 (23%)
leucine-rich repeat 983..1055 CDD:275380 8/51 (16%)
leucine-rich repeat 1009..1033 CDD:275380 4/23 (17%)
leucine-rich repeat 1058..1085 CDD:275380
TPKR_C2 1121..1168 CDD:301599
RLP40NP_566757.2 LRR_RI 97..>263 CDD:238064 46/175 (26%)
LRR_8 130..190 CDD:290566 19/66 (29%)
leucine-rich repeat 131..155 CDD:275380 6/23 (26%)
leucine-rich repeat 156..179 CDD:275380 10/29 (34%)
leucine-rich repeat 180..202 CDD:275380 5/21 (24%)
LRR_8 201..264 CDD:290566 19/63 (30%)
leucine-rich repeat 203..228 CDD:275380 8/24 (33%)
leucine-rich repeat 229..253 CDD:275380 7/24 (29%)
leucine-rich repeat 254..277 CDD:275380 4/22 (18%)
leucine-rich repeat 278..300 CDD:275380 8/28 (29%)
leucine-rich repeat 301..324 CDD:275380 6/22 (27%)
leucine-rich repeat 325..349 CDD:275380 8/23 (35%)
leucine-rich repeat 350..371 CDD:275380 8/24 (33%)
LRR_8 422..481 CDD:290566 17/63 (27%)
leucine-rich repeat 424..446 CDD:275380 6/22 (27%)
leucine-rich repeat 447..468 CDD:275380 8/24 (33%)
leucine-rich repeat 471..495 CDD:275380 5/23 (22%)
leucine-rich repeat 517..540 CDD:275380 5/22 (23%)
leucine-rich repeat 541..585 CDD:275380 11/46 (24%)
LRR_8 560..620 CDD:290566 21/63 (33%)
leucine-rich repeat 563..583 CDD:275380 6/22 (27%)
leucine-rich repeat 586..609 CDD:275380 7/22 (32%)
leucine-rich repeat 610..633 CDD:275380 6/22 (27%)
leucine-rich repeat 634..660 CDD:275380 7/25 (28%)
leucine-rich repeat 735..758 CDD:275380 7/23 (30%)
leucine-rich repeat 759..782 CDD:275380 8/22 (36%)
LRR_8 762..817 CDD:290566 23/61 (38%)
leucine-rich repeat 783..806 CDD:275380 11/22 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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