DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and RLP19

DIOPT Version :9

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_179112.1 Gene:RLP19 / 815997 AraportID:AT2G15080 Length:983 Species:Arabidopsis thaliana


Alignment Length:959 Identity:236/959 - (24%)
Similarity:380/959 - (39%) Gaps:196/959 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 TIEELDLSYNLIRRIPEKA-----------FDGLK-----DSLNELRLANNLLGDNLNPIFSTAE 155
            |:||.....|    ||.|.           :||:|     ..:.||.|:.:.|...||...|...
plant    47 TLEESCFDSN----IPLKTESWTNNSDCCYWDGIKCDAKFGDVIELDLSFSCLRGQLNSNSSLFR 107

  Fly   156 LHVLKNLRLLDLSGNKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALRHLSLRQNQI 220
            |..|:.|..||||.|                       :.:..:| :||...|.|..|.|.:|..
plant   108 LPQLRFLTTLDLSNN-----------------------DFIGQIP-SSLETLSNLTTLDLSRNHF 148

  Fly   221 GSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFEKLQSLQKL 285
            ...:..|......|..:|..||........:...|..:....|:.|..|.........|..|..|
plant   149 SGRIPSSIGNLSHLIFVDFSHNNFSGQIPSSLGYLSHLTSFNLSYNNFSGRVPSSIGNLSYLTTL 213

  Fly   286 DLSEN-FFGQFPTVALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFR 349
            .||.| |||:.|: :|.::..|..|.|.:|.......:.:..:..|.|:|:.:|..         
plant   214 RLSRNSFFGELPS-SLGSLFHLTDLILDTNHFVGKIPSSLGNLSHLTSIDLHKNNF--------- 268

  Fly   350 EMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNRVAA 414
             :|.:.:              :|..|..|.:.|:.||||:....|:.|.|.||..|.:..|:::.
plant   269 -VGEIPF--------------SLGNLSCLTSFILSDNNIVGEIPSSFGNLNQLDILNVKSNKLSG 318

  Fly   415 LSAEILGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGN--------------SLAVI 465
            .....|.:|:  .::||||..|.:....|.:....|:|...|.:.|              ||..|
plant   319 SFPIALLNLR--KLSTLSLFNNRLTGTLPSNMSSLSNLKLFDATENHFTGPLPSSLFNIPSLKTI 381

  Fly   466 NADT--------FAGLE--STLMALKLSQNRLTG-LGGAPWVLPELRSLDLSG-NTLTELPSTIF 518
            ..:.        |..:.  |.|..|:|..|...| :..:...|..|:.||||. ||...:..|||
plant   382 TLENNQLNGSLGFGNISSYSNLTVLRLGNNNFRGPIHRSISKLVNLKELDLSNYNTQGLVDFTIF 446

  Fly   519 EELENVQSLNLSGNHLTPLTG-------ALFKPLDRLQVIDLSGCNIRQISGDLL--AGLQDLKH 574
            ..|::::.||||  ||...|.       :.||.||.|   ||||.::...:...|  :.|..:..
plant   447 SHLKSIEYLNLS--HLNTTTTIDMYEILSSFKLLDTL---DLSGSHVSTTNKSSLSNSSLVLISQ 506

  Fly   575 IYLNDNQLQELQDGSFVNLWNIS-SIDLSNNRIGSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYF 638
            :||:...:.|..  .|:....:. ::|:|||:|.....|....:..|..::|..|....|:.   
plant   507 LYLSGCGITEFP--KFLRSQELMLTLDISNNKIKGQVPGWLWMLPVLNYVNLSNNTFIGFER--- 566

  Fly   639 NTGTGIEELDISDNQLSYLFPSSFRIHPRLREIRAANNKFSFFPAELISTLQYLEHIDLSHNQ-- 701
            :|..|:               :|.:..|.:|::..:||.|:......|..|.||..:|.|:|:  
plant   567 STKLGL---------------TSIQEPPAMRQLFCSNNNFTGNIPSFICELPYLSTLDFSNNKFN 616

  Fly   702 ------LKTIEELDFARLPRLRVLLVANNQLD-MVSEMAFHNSTQLQILDLAHNNLDRIGE--RT 757
                  :..|:.      |.|:.|.:.:|:|. ::.|..|.:   |..||:.||.|  :|:  |:
plant   617 GSIPTCMGNIQS------PYLQALNLRHNRLSGLLPENIFES---LISLDVGHNQL--VGKLPRS 670

  Fly   758 FEGLVRLEQLNLEGNRLSE-----LSDGVFERTKLQMLENINLAHNRFEYAPLNALQRQFFFVSS 817
            ...:..|..||:|.|::|:     ||       .||.|:.:.|..|.| |.|:.  :.||..:..
plant   671 LSHISSLGLLNVESNKISDTFPLWLS-------SLQELQVLVLRSNAF-YGPIE--KTQFSKLRI 725

  Fly   818 VDLSHNKIK-ELPGDDSIMVN---IKRIDLSFNPLSSKAVHNVL--NEPKTVRELSLAGTGIE-N 875
            :|:|.|:.. .||.  :..||   :..:|.:.:..:.:.:.|:.  .:......:.|...|:| .
plant   726 IDISGNQFNGTLPA--NFFVNWTAMFSLDENEDQSNGETMSNMYMSTDYFYFDSMVLMNKGVEME 788

  Fly   876 LELLETPFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDLSMAWPQLQVLQSLDVS 940
            ||.:...| ..::.|.||.:...|:....:..|..|:||:|.|..  .::.:...|..|:|||||
plant   789 LERVLKVF-TVIDFSGNKFEGEIPKSIGLLKELHVLNLSNNALSG--HIASSMGNLMALESLDVS 850

  Fly   941 NNSFEIVSQSNFGKLEMLRSLRLSH------LP--------QCTRIEKN 975
            .|..........|||..|..:..||      ||        :|:..|.|
plant   851 QNKLSGEIPQELGKLTYLAYMNFSHNQLVGLLPGGTQFQTQKCSSFEDN 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 LRR_8 109..172 CDD:290566 24/78 (31%)
leucine-rich repeat 109..132 CDD:275380 9/38 (24%)
LRR_RI <132..338 CDD:238064 50/206 (24%)
leucine-rich repeat 133..161 CDD:275380 9/27 (33%)
LRR_8 160..220 CDD:290566 14/59 (24%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
leucine-rich repeat 186..209 CDD:275380 3/22 (14%)
leucine-rich repeat 210..233 CDD:275380 5/22 (23%)
LRR_8 232..290 CDD:290566 13/57 (23%)
leucine-rich repeat 234..257 CDD:275380 5/22 (23%)
leucine-rich repeat 258..281 CDD:275380 4/22 (18%)
LRR_RI 273..535 CDD:238064 74/288 (26%)
LRR_8 281..338 CDD:290566 17/57 (30%)
leucine-rich repeat 282..329 CDD:275380 14/47 (30%)
LRR_8 328..388 CDD:290566 11/59 (19%)
leucine-rich repeat 330..353 CDD:275380 4/22 (18%)
leucine-rich repeat 354..377 CDD:275380 2/22 (9%)
leucine-rich repeat 378..401 CDD:275380 9/22 (41%)
leucine-rich repeat 402..425 CDD:275380 5/22 (23%)
leucine-rich repeat 428..451 CDD:275380 6/22 (27%)
LRR_8 429..487 CDD:290566 19/81 (23%)
leucine-rich repeat 452..473 CDD:275380 7/42 (17%)
leucine-rich repeat 477..497 CDD:275378 5/20 (25%)
LRR_8 498..558 CDD:290566 27/67 (40%)
leucine-rich repeat 500..523 CDD:275380 11/23 (48%)
LRR_RI 502..769 CDD:238064 75/288 (26%)
leucine-rich repeat 524..547 CDD:275380 10/29 (34%)
leucine-rich repeat 548..571 CDD:275380 7/24 (29%)
LRR_8 572..630 CDD:290566 13/58 (22%)
leucine-rich repeat 572..595 CDD:275380 4/22 (18%)
leucine-rich repeat 596..619 CDD:275380 6/23 (26%)
LRR_8 619..678 CDD:290566 11/58 (19%)
leucine-rich repeat 620..643 CDD:275380 5/22 (23%)
leucine-rich repeat 644..667 CDD:275380 1/22 (5%)
LRR_8 666..726 CDD:290566 17/67 (25%)
leucine-rich repeat 668..691 CDD:275380 6/22 (27%)
leucine-rich repeat 692..715 CDD:275380 5/30 (17%)
LRR_8 714..774 CDD:290566 20/62 (32%)
leucine-rich repeat 716..739 CDD:275380 6/23 (26%)
leucine-rich repeat 740..761 CDD:275380 8/22 (36%)
leucine-rich repeat 764..789 CDD:275380 9/29 (31%)
leucine-rich repeat 790..810 CDD:275380 6/19 (32%)
leucine-rich repeat 818..850 CDD:275380 8/35 (23%)
leucine-rich repeat 863..883 CDD:275378 5/20 (25%)
LRR_RI <878..1070 CDD:238064 30/112 (27%)
LRR_8 884..944 CDD:290566 18/59 (31%)
LRR_4 884..925 CDD:289563 10/40 (25%)
leucine-rich repeat 884..907 CDD:275380 4/22 (18%)
leucine-rich repeat 908..933 CDD:275380 7/24 (29%)
leucine-rich repeat 934..955 CDD:275380 8/20 (40%)
leucine-rich repeat 958..982 CDD:275380 8/32 (25%)
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
TPKR_C2 1121..1168 CDD:301599
RLP19NP_179112.1 PLN00113 3..>646 CDD:331614 164/684 (24%)
leucine-rich repeat 114..137 CDD:275380 9/46 (20%)
leucine-rich repeat 138..161 CDD:275380 5/22 (23%)
leucine-rich repeat 162..185 CDD:275380 5/22 (23%)
leucine-rich repeat 186..209 CDD:275380 4/22 (18%)
leucine-rich repeat 210..233 CDD:275380 10/23 (43%)
leucine-rich repeat 234..257 CDD:275380 4/22 (18%)
leucine-rich repeat 258..281 CDD:275380 7/46 (15%)
leucine-rich repeat 282..305 CDD:275380 9/22 (41%)
leucine-rich repeat 306..329 CDD:275380 5/24 (21%)
leucine-rich repeat 330..351 CDD:275380 6/20 (30%)
leucine-rich repeat 354..377 CDD:275380 3/22 (14%)
leucine-rich repeat 378..402 CDD:275380 3/23 (13%)
leucine-rich repeat 403..424 CDD:275380 5/20 (25%)
leucine-rich repeat 427..451 CDD:275380 11/23 (48%)
leucine-rich repeat 452..477 CDD:275380 8/26 (31%)
leucine-rich repeat 507..526 CDD:275380 4/20 (20%)
leucine-rich repeat 527..550 CDD:275380 6/22 (27%)
leucine-rich repeat 551..574 CDD:275380 6/40 (15%)
leucine-rich repeat 575..604 CDD:275380 7/28 (25%)
PLN00113 <604..692 CDD:331614 27/98 (28%)
leucine-rich repeat 605..630 CDD:275380 5/30 (17%)
leucine-rich repeat 631..655 CDD:275380 7/26 (27%)
PLN00113 <656..739 CDD:331614 29/94 (31%)
leucine-rich repeat 656..676 CDD:275380 7/21 (33%)
leucine-rich repeat 677..700 CDD:275380 9/29 (31%)
leucine-rich repeat 701..722 CDD:275380 8/23 (35%)
leucine-rich repeat 723..795 CDD:275380 14/73 (19%)
leucine-rich repeat 796..819 CDD:275380 5/23 (22%)
PLN00113 <808..962 CDD:331614 26/94 (28%)
leucine-rich repeat 820..843 CDD:275380 7/24 (29%)
leucine-rich repeat 844..867 CDD:275380 10/22 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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