DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and vasna

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001313614.1 Gene:vasna / 553185 ZFINID:ZDB-GENE-050522-43 Length:688 Species:Danio rerio


Alignment Length:548 Identity:131/548 - (23%)
Similarity:228/548 - (41%) Gaps:102/548 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 IKDNNILLVPGSALGRLPQLTS----LQLDYNRVAALSAEILGSLQAGDITTLSLSRNVIRELPP 443
            :.:|||..|..:.:.....|.|    |.:..|::..|..:  ..::.|::..|.||:|.:.|:|.
Zfish    31 LPNNNIFCVQRNLIYMPRGLPSTGKQLYVFQNKINILQQQ--DFVELGELEMLDLSQNSLSEIPD 93

  Fly   444 GSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRLTGLGGAPWV-LPELRSLDLSG 507
            |.|...||||.||||.|.:..|:.|:|.||.: |..|.|..|.:..:..|.:. |..|..|.|.|
Zfish    94 GVFSPLSSLHNLDLSSNYITHISKDSFIGLVN-LERLYLYSNIIQNIHPAAFEGLENLLELKLQG 157

  Fly   508 NTLTELPSTIFEELENVQSLNLSGNHLTPLTGA-LFKPLDRLQVIDLSGCNIRQISGDLLAGLQD 571
            |.::.||:.   :|..:..|:||.|.:.||... |..|  .|:.:.::|..:..:..:||..|.:
Zfish   158 NQISVLPAL---QLPRLLHLDLSYNSIPPLVAQDLQTP--HLESLKIAGLGLTSLDEELLGSLVN 217

  Fly   572 LKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHGNQLSAFKGE 636
            |..:.::.|||.::|. :..::..:.:::|:.|.:||::...|.|::.|.:|||....|..|...
Zfish   218 LHVLDVSQNQLVDIQP-TLKSMGGLRNLNLTGNPLGSLKHEDFQNLVNLLELDLSNLNLQGFPEG 281

  Fly   637 YFNTGTGIEELDISDNQLSYL-----FPSSFRIHPRLREIRAANNKFSFFPAELISTLQYLEHID 696
            :||....:|:|..::|..:.|     ||:..: ..|:..:|....:..|.|......|:.|||.|
Zfish   282 FFNLFPKLEKLTAAENPFNCLCPLAWFPAWLK-DVRVELLRTEETRCHFPPINSGKVLEKLEHKD 345

  Fly   697 LSHNQLKTIEELDFARLPRLRVLLVANNQLDMVSEMAFHNSTQLQIL---------DLAHNNLD- 751
            ..              .|...:.|.:.......|:.. ::||||...         |::..:.| 
Zfish   346 FG--------------CPTTTIELTSAGTSSTTSKPK-NSSTQLGTTHIVPPAPPSDISSADADN 395

  Fly   752 -----------RIGERT-FEGLVRLEQLNLEGNRLSELSDGVF---------------------- 782
                       ||.|.: .||::....:.|.|......|:||.                      
Zfish   396 FPVYQTTAFPSRIMEDSEGEGIMCPPNICLNGGTCIFKSNGVIVCLCPPSMSGNYCEIQNEAMLP 460

  Fly   783 ---ERTKLQMLENINLAHNRFEYAPLNALQRQFFFVSSVDLS-HNKIKELPGDDSIMVNIKRIDL 843
               .|..|:.:..:.         | |.:.......:|:.|. |..|:..|       :|:.|.|
Zfish   461 PPSPRVSLETIATVQ---------P-NTISSHHITSTSISLDLHRYIQTRP-------HIRGIRL 508

  Fly   844 SFNPLSSKAVHNV-LNEPKTVRELSLAG 870
            :::.||......: |:.|.:..|.:|.|
Zfish   509 TYSNLSGPDRRPLQLSVPPSYPEYTLRG 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 7/30 (23%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 101/386 (26%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380
leucine-rich repeat 330..353 CDD:275380
leucine-rich repeat 354..377 CDD:275380
leucine-rich repeat 378..401 CDD:275380 4/17 (24%)
leucine-rich repeat 402..425 CDD:275380 5/26 (19%)
leucine-rich repeat 428..451 CDD:275380 8/22 (36%)
leucine-rich repeat 452..473 CDD:275380 10/20 (50%)
leucine-rich repeat 477..497 CDD:275378 5/20 (25%)
leucine-rich repeat 500..523 CDD:275380 8/22 (36%)
leucine-rich repeat 524..547 CDD:275380 8/23 (35%)
leucine-rich repeat 548..571 CDD:275380 5/22 (23%)
leucine-rich repeat 572..595 CDD:275380 5/22 (23%)
leucine-rich repeat 596..619 CDD:275380 6/22 (27%)
leucine-rich repeat 620..643 CDD:275380 8/22 (36%)
leucine-rich repeat 644..667 CDD:275380 6/27 (22%)
leucine-rich repeat 668..691 CDD:275380 4/22 (18%)
LRR <684..1020 CDD:443914 43/236 (18%)
leucine-rich repeat 692..715 CDD:275380 4/22 (18%)
leucine-rich repeat 716..739 CDD:275380 3/22 (14%)
leucine-rich repeat 740..761 CDD:275380 7/42 (17%)
leucine-rich repeat 764..789 CDD:275380 7/49 (14%)
leucine-rich repeat 790..810 CDD:275380 2/19 (11%)
leucine-rich repeat 818..850 CDD:275380 8/32 (25%)
leucine-rich repeat 863..883 CDD:275378 3/8 (38%)
leucine-rich repeat 884..907 CDD:275380
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
LRRCT 1121..1168 CDD:214507
vasnaNP_001313614.1 leucine-rich repeat 53..77 CDD:275380 3/25 (12%)
LRR <63..>277 CDD:443914 67/222 (30%)
leucine-rich repeat 78..101 CDD:275380 8/22 (36%)
leucine-rich repeat 102..125 CDD:275380 12/22 (55%)
leucine-rich repeat 126..149 CDD:275380 6/22 (27%)
leucine-rich repeat 150..170 CDD:275380 8/22 (36%)
leucine-rich repeat 171..193 CDD:275380 8/23 (35%)
leucine-rich repeat 194..217 CDD:275380 5/22 (23%)
leucine-rich repeat 218..240 CDD:275380 5/22 (23%)
leucine-rich repeat 241..264 CDD:275380 6/22 (27%)
leucine-rich repeat 265..288 CDD:275380 8/22 (36%)
PCC 269..>464 CDD:188093 40/210 (19%)
fn3 475..546 CDD:394996 17/79 (22%)
Blue background indicates that the domain is not in the aligned region.

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