DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and 2mit

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001262529.1 Gene:2mit / 41616 FlyBaseID:FBgn0260793 Length:1155 Species:Drosophila melanogaster


Alignment Length:1282 Identity:267/1282 - (20%)
Similarity:463/1282 - (36%) Gaps:335/1282 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LTSVPTNS-LNGPSALRHLSLRQNQIGSLL-------------ADSFNAQ---------RQLEI- 236
            |..:||:| |......:.|| ||: :|.|.             .|||..:         |:||: 
  Fly    31 LVDIPTSSRLAAEREEQQLS-RQD-VGRLSYQSIHRMLRDENEPDSFRGELRYQQKRHKRELELN 93

  Fly   237 -----IDLRHNVIRSIDSLA--FKG-LQKIREIKLAGNRISHLNSDVFEKLQSLQKLDLSENFFG 293
                 ::|.|..:|:.:|..  :|| .|.|..:.|:.|::..|:.|.|.:   |::|||..|   
  Fly    94 APANKLNLTHRDLRTFNSTGGQWKGDFQVITAMDLSSNQLESLSLDNFNQ---LRQLDLGNN--- 152

  Fly   294 QFPTVALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTF-REMGALKYL 357
                 :|..:|    |:|:.        |:|.:  ...:||:|.|..:.|:...| :.:..||.|
  Fly   153 -----SLEVIP----LSLAD--------TNMSL--PFVTLDLSCNKFSQISTSFFAQRLPQLKNL 198

  Fly   358 DLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNRVAALSAEILGS 422
            :|:.|.|..|..::...|..||||::..|||..:.......||.|..|.|.:||   ||...:.:
  Fly   199 NLAHNELLNISRESFYNLLELQTLVLSHNNISDIDYETFLALPNLQYLDLSHNR---LSGSAIRA 260

  Fly   423 LQA-GDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNR 486
            ||. .|:.:||::.|....:....|....||..||.||..|..:.    |.|..::..||||.|.
  Fly   261 LQGIPDLVSLSIAYNPDVGVAMQEFVASWSLKELDASGTGLCQVP----AALAQSVRTLKLSDNW 321

  Fly   487 LTGLG-GAPWVLPELRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQV 550
            |..:. |.....|.|:.||||.:.:.::.......||.::||.|..|.|..:..:|  |      
  Fly   322 LKAINCGDMDSYPLLQYLDLSHSRIAQVEDDALGRLELLESLFLDRNLLMRVPSSL--P------ 378

  Fly   551 IDLSGCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAFV 615
                               ..|:|::|..||:.||...:||.|.|:.::||||||:      .|:
  Fly   379 -------------------PSLEHLFLQHNQIMELPPQAFVGLVNLQTLDLSNNRL------IFL 418

  Fly   616 NVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIH--PRLREIRAANNKF 678
            ..:.|.|| |..|..|          :|:|.:            |...:|  |:||::...:|..
  Fly   419 PPLSLPKL-LTLNLES----------SGVESV------------SQSIVHTLPQLRDLLLEDNPI 460

  Fly   679 SFFPAELISTLQY---LEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQLDMVSE-MAFHNSTQ 739
            ..  ::|:...::   ...:|...:...::                 :.::|:.:| :.|||   
  Fly   461 KC--SDLLGIAEWASPCRSVDAGQSNGASV-----------------SGRVDLKTEYLQFHN--- 503

  Fly   740 LQILDLAHNNLD--RIGERTFEGLVRLEQLNLEGNRLS-ELSDGVFERTKLQMLENINLAHNRFE 801
                  .:.|..  ..|.|..|...:....:|  .|.| .|:......:|::..:.........|
  Fly   504 ------FYENFSSRECGIRKPENDTKPPSCSL--TRASATLTTTPRSMSKVEKSQEAQATATSVE 560

  Fly   802 YAPLNALQRQFFFVSSVDLSHNKIKELPGDDSIMVNIKRIDLSFNP--LSSKAVHNVLNEPKTVR 864
            .|...|...:...:.:...:.:.......:...:......|.:..|  .::.|:.:..|.|..:.
  Fly   561 VAAATAATSEKTGIQATSAAQSTAAATTAEREAIATATSSDTTATPTLAAAAAIQSAGNIPAQLT 625

  Fly   865 ELSLAGTGIENLELL--------------ETPFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSS 915
            ..:|..|...:|..|              |||.....:|:..|.....|.:..|.....|.:::|
  Fly   626 TKTLRPTETTSLAQLQRRQQMPGMPAKTTETPAKNLPSLAQTKATTALPILATRDAATATTEINS 690

  Fly   916 NQLESLEDLSMAWPQLQVLQSLDVSNNSFEIVSQSNFGKLEMLRSLRLSHLPQCTRIEKN--AFK 978
            ::..::...:..           |:.::.||.:                  |....:.:.  |.|
  Fly   691 DKPTNISGATKT-----------VATSAAEIAT------------------PPAIEVPQTILAGK 726

  Fly   979 QLPNLVSLEAYDLPLLGY--LDLQGILELLPGLE-VLDIEVKDSS-IGSEQIQPLKHPRLKSLGI 1039
            :...:.:.:|:: .||.|  .|..|.:...|... .|.:.|||.. ||:    ||...:...|.:
  Fly   727 KSDKMPADKAHE-TLLKYPTRDTSGQVATTPHKHATLQLHVKDRHLIGT----PLLMHKGDVLLV 786

  Fly  1040 RGDRLKSISSGTLAGLKSNDLSVQLRNTSLNALPPALLFPVPRSSHLSLNVEGSKITVLVPQFLN 1104
            ..::|....:.|:|...|..|.                   |...|.|...|..:          
  Fly   787 DAEQLLLPGTATVADADSEVLD-------------------PSQQHQSAEQEKHQ---------- 822

  Fly  1105 ALEDRRASLQLQGLASNPIVCDCNARALRRWLPSSGMPDVTCASPAYLLNRKLIEVGDDELTCDA 1169
            :..|:|.:..:.|...:|      |:..::      .|.::.....|........|.|...|...
  Fly   823 SATDKRQADAINGDTKSP------AKGHKK------KPSLSIKKMTYSTKHAAKTVEDMAATSKT 875

  Fly  1170 -RRMTSSTSRPTASVPHLLKTSSQLVTRSSSTTEEPLIIWSLEPTQPPSLKKMKTKAPLMKAQSP 1233
             :...||.:.|..:.|..|.|.:||.......:|          ::|..|...:.:         
  Fly   876 PQHQHSSVNTPKEAAPEELSTFAQLKAYVELKSE----------SKPEHLMDQREE--------- 921

  Fly  1234 IISNDDTLIIGIVGGVVAFIAILIIII----------CIIRLRMSNAEYQQNATMIGIPAGMQMG 1288
               |...| .|...||:..:|.::.|:          |.:..:.||.            :|....
  Fly   922 ---NHHNL-TGNHPGVMLLVACVLFIVLLAGLAHVYRCELPWQRSNR------------SGQLRP 970

  Fly  1289 AHNAAYNYKNGAGAALYAVPPYHATL------PHKAASIHQSSQ----------NLSQRQQQQQQ 1337
            .|....|..:.|.:.|:    |..::      |.:....|.|::          ||..|:.|||:
  Fly   971 HHQRHLNETDDAHSFLH----YQGSVNSNGGDPARLQKWHHSTRREAPYSSPLHNLQARELQQQR 1031

  Fly  1338 QQQVAAAAAAYSTMSRMSYFSGAGGGNGDGAESLTHQHPHQHQPYII 1384
            .||..:::.|..:.|..|..||:       :.|..|. |.:...|.|
  Fly  1032 CQQFYSSSLADKSSSTSSSSSGS-------SRSSLHS-PSRDDSYYI 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 67/246 (27%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380 5/13 (38%)
leucine-rich repeat 210..233 CDD:275380 9/44 (20%)
leucine-rich repeat 234..257 CDD:275380 8/31 (26%)
PLN00113 237..>750 CDD:215061 131/524 (25%)
leucine-rich repeat 258..281 CDD:275380 6/22 (27%)
leucine-rich repeat 282..329 CDD:275380 11/46 (24%)
leucine-rich repeat 330..353 CDD:275380 6/23 (26%)
leucine-rich repeat 354..377 CDD:275380 8/22 (36%)
leucine-rich repeat 378..401 CDD:275380 8/22 (36%)
leucine-rich repeat 402..425 CDD:275380 8/22 (36%)
leucine-rich repeat 428..451 CDD:275380 4/22 (18%)
leucine-rich repeat 452..473 CDD:275380 7/20 (35%)
leucine-rich repeat 477..497 CDD:275378 7/20 (35%)
leucine-rich repeat 500..523 CDD:275380 6/22 (27%)
leucine-rich repeat 524..547 CDD:275380 7/22 (32%)
leucine-rich repeat 548..571 CDD:275380 0/22 (0%)
leucine-rich repeat 572..595 CDD:275380 10/22 (45%)
leucine-rich repeat 596..619 CDD:275380 7/22 (32%)
leucine-rich repeat 620..643 CDD:275380 6/22 (27%)
leucine-rich repeat 644..667 CDD:275380 3/24 (13%)
leucine-rich repeat 668..691 CDD:275380 4/22 (18%)
LRR <684..1020 CDD:443914 54/363 (15%)
leucine-rich repeat 692..715 CDD:275380 1/22 (5%)
leucine-rich repeat 716..739 CDD:275380 5/23 (22%)
leucine-rich repeat 740..761 CDD:275380 4/22 (18%)
leucine-rich repeat 764..789 CDD:275380 5/25 (20%)
leucine-rich repeat 790..810 CDD:275380 3/19 (16%)
leucine-rich repeat 818..850 CDD:275380 2/33 (6%)
leucine-rich repeat 863..883 CDD:275378 6/33 (18%)
leucine-rich repeat 884..907 CDD:275380 4/22 (18%)
leucine-rich repeat 908..933 CDD:275380 2/24 (8%)
leucine-rich repeat 934..955 CDD:275380 3/20 (15%)
leucine-rich repeat 958..982 CDD:275380 3/25 (12%)
leucine-rich repeat 983..1055 CDD:275380 19/75 (25%)
leucine-rich repeat 1009..1033 CDD:275380 8/25 (32%)
leucine-rich repeat 1058..1085 CDD:275380 2/26 (8%)
LRRCT 1121..1168 CDD:214507 7/46 (15%)
2mitNP_001262529.1 LRR <106..458 CDD:443914 121/439 (28%)
leucine-rich repeat 124..143 CDD:275380 5/18 (28%)
leucine-rich repeat 144..167 CDD:275380 10/42 (24%)
leucine-rich repeat 172..194 CDD:275380 6/21 (29%)
leucine-rich repeat 195..218 CDD:275380 8/22 (36%)
leucine-rich repeat 219..242 CDD:275380 8/22 (36%)
leucine-rich repeat 243..311 CDD:275380 23/74 (31%)
leucine-rich repeat 312..335 CDD:275380 7/22 (32%)
leucine-rich repeat 336..359 CDD:275380 6/22 (27%)
leucine-rich repeat 360..380 CDD:275380 7/46 (15%)
leucine-rich repeat 381..404 CDD:275380 10/22 (45%)
leucine-rich repeat 405..449 CDD:275380 17/72 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.