DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and tlr8b

DIOPT Version :9

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001373638.1 Gene:tlr8b / 403136 ZFINID:ZDB-GENE-040219-12 Length:1015 Species:Danio rerio


Alignment Length:1007 Identity:242/1007 - (24%)
Similarity:390/1007 - (38%) Gaps:290/1007 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 HSGQ------QVLPAQTFGQLKLTIEELDLSYNLIRRIPEKAFDGLKDSLNELRLANNLLGDNLN 148
            ||.:      :.||...  .|..|...||.|...:::||:    .|..:...|.||||.:.:...
Zfish    12 HSSEGYNWAWRKLPCDV--NLSNTSVTLDCSERYLKKIPK----NLIWNTTNLNLANNKIHNISK 70

  Fly   149 PIFSTAELHVLKNLRLLDLSGNKIKLIEE---GLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSAL 210
            ..|..     |.|:..:||..|:|:...|   |:.....:||...:|.|.::.:|.|.   |:.|
Zfish    71 DAFWN-----LNNVTWIDLRRNQIEKCHEKDNGVFSRLTNLKTLLLDNNKISVLPKNL---PAGL 127

  Fly   211 RHLSLRQNQIGSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDV 275
            :.|||..|.                        |:||:...|||:.|:..:||..|...::::::
Zfish   128 QWLSLNSNH------------------------IKSIEQSDFKGMTKLTVLKLNKNCYHNISAEL 168

  Fly   276 FEKLQSLQKLDLSENFFGQFPTVALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTI 340
            ..:.::.|.|.|:|                   |.||.|.|..:.:.   :.|:|.:|.:..|.|
Zfish   169 TIQNETFQHLQLTE-------------------LQLSKNGLHNVPFA---LPRTLHNLSLLLNRI 211

  Fly   341 TTITPGTFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLP----- 400
            ..:.......:..||.||||                                    |..|     
Zfish   212 DHVHESDLNHLTRLKVLDLS------------------------------------GNCPICFTT 240

  Fly   401 --QLTSLQLDYNRVAALSAEILGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLA 463
              ..||.|.:.|.:                           ::.|.:|...|.|..|.||||||.
Zfish   241 PFPCTSCQTNNNAL---------------------------QIHPNAFSKLSQLQDLRLSGNSLQ 278

  Fly   464 VINADTFAGLESTLMALKLSQNRLTG---LGGAPWVLPELRSLDLSGNTLTELPSTIFEELENVQ 525
            .||:..|..| :.|..|.||.|.|..   .|....|||::..:|:|.|..:|   .|:..|:..:
Zfish   279 SINSMWFQNL-TNLKYLYLSFNSLISEFESGQFFSVLPQVEVVDISYNNPSE---RIYPRLKLSE 339

  Fly   526 SLNLSGNHLTPLTGALFKPLDRLQVIDLSGCNIRQISGD---LLAGLQDLKHIYLNDNQLQELQD 587
            .               |..|:.||.:.|.|....::|.|   .|..|::|..:.|..|.||::..
Zfish   340 G---------------FSRLESLQTLHLEGYIFHKLSEDDLRPLFSLRNLSVLNLAVNFLQQVNL 389

  Fly   588 GSFVNLWNISSIDLSNNRI----------GSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYFNT-- 640
            ..|.|..|:|.|.|.:||:          |..:||.        |.|   ||....:|.|.:|  
Zfish   390 SVFRNFHNLSLISLIDNRLTFSSPIRRWEGQSKSGF--------KDD---NQGDHREGPYIHTNE 443

  Fly   641 --------------GTGIEELDISDNQLSYLFPSSFRIHPRLREIRAANNKFSFFPAELISTLQY 691
                          .|| ..||:|.|.:       :.::|.|           |..||.|:.|..
Zfish   444 EFRHYPPFTKAECLATG-PVLDLSRNNI-------YHVNPPL-----------FTGAENITCLNL 489

  Fly   692 LEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQLDMVSEMAFHNSTQLQILDLAHNN--LDRIG 754
            ..:..:|:     ....:||..|:|:.|.:::|::.|.|:.|......|::|||:||.  .:..|
Zfish   490 SSNFIVSY-----FNGTEFAHFPKLKYLDLSHNRIYMHSDSALSELKALEVLDLSHNQHYFEVAG 549

  Fly   755 ER---TF-EGLVRLEQLNLEGNRLSELSDGVFERTKLQMLENINLAHNRFE--YAPLNALQRQFF 813
            .|   || |.|..|:.|||..|.::.|::...:...|..|:   ...||.:  :......|..|.
Zfish   550 VRNCLTFLENLQFLKVLNLSWNEINMLTNKTLQSDSLNELQ---FQGNRLDIMWKKQRGYQSLFK 611

  Fly   814 FVSS---VDLSHNKIKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVLNEPKTVRELSLAGTGIEN 875
            .:|:   :|:|:||:.|:|.|                     :.:..  |||:|.:|::...:.:
Zfish   612 SLSNLTYLDISYNKLSEIPDD---------------------IFDYF--PKTLRYISMSRNTLTD 653

  Fly   876 L---ELLETPFLQFLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDLSMAWPQLQVLQSL 937
            .   :|...|.|:.|:||.|||:.|..::.:....|:.||||.||:..|....:  ..::.||.|
Zfish   654 FAWEQLQSLPQLETLDLSKNKLRVVPRKLSKHTRSLKVLDLSHNQISKLRYSFL--ENVKSLQIL 716

  Fly   938 DVSNNSFEIVSQSNF--GKLEMLRSLRLSHLP-QCT--------RIEKNAFKQLPNLVSLEAYDL 991
            :.:||..:.:..|:|  |....|:.|.|...| .||        .:||:. ..||.|.:....||
Zfish   717 NFANNKLKHLGASSFTTGSNHQLQILDLQRNPIHCTCNLLDFILWLEKSD-TILPRLATDVLCDL 780

  Fly   992 PLLGYLDLQGILELLPGLEVLDIEVKDSSIGS 1023
            |           |...|..::.::.|::.|.:
Zfish   781 P-----------ESKRGHPMVSLDFKNACINN 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 LRR_8 109..172 CDD:290566 17/62 (27%)
leucine-rich repeat 109..132 CDD:275380 6/22 (27%)
LRR_RI <132..338 CDD:238064 48/208 (23%)
leucine-rich repeat 133..161 CDD:275380 7/27 (26%)
LRR_8 160..220 CDD:290566 19/62 (31%)
leucine-rich repeat 162..185 CDD:275380 6/25 (24%)
leucine-rich repeat 186..209 CDD:275380 7/22 (32%)
leucine-rich repeat 210..233 CDD:275380 5/22 (23%)
LRR_8 232..290 CDD:290566 13/57 (23%)
leucine-rich repeat 234..257 CDD:275380 6/22 (27%)
leucine-rich repeat 258..281 CDD:275380 3/22 (14%)
LRR_RI 273..535 CDD:238064 57/271 (21%)
LRR_8 281..338 CDD:290566 12/56 (21%)
leucine-rich repeat 282..329 CDD:275380 9/46 (20%)
LRR_8 328..388 CDD:290566 11/59 (19%)
leucine-rich repeat 330..353 CDD:275380 4/22 (18%)
leucine-rich repeat 354..377 CDD:275380 6/22 (27%)
leucine-rich repeat 378..401 CDD:275380 2/29 (7%)
leucine-rich repeat 402..425 CDD:275380 4/22 (18%)
leucine-rich repeat 428..451 CDD:275380 2/22 (9%)
LRR_8 429..487 CDD:290566 20/57 (35%)
leucine-rich repeat 452..473 CDD:275380 11/20 (55%)
leucine-rich repeat 477..497 CDD:275378 7/22 (32%)
LRR_8 498..558 CDD:290566 13/59 (22%)
leucine-rich repeat 500..523 CDD:275380 6/22 (27%)
LRR_RI 502..769 CDD:238064 76/301 (25%)
leucine-rich repeat 524..547 CDD:275380 2/22 (9%)
leucine-rich repeat 548..571 CDD:275380 8/25 (32%)
LRR_8 572..630 CDD:290566 19/67 (28%)
leucine-rich repeat 572..595 CDD:275380 7/22 (32%)
leucine-rich repeat 596..619 CDD:275380 8/32 (25%)
LRR_8 619..678 CDD:290566 15/74 (20%)
leucine-rich repeat 620..643 CDD:275380 7/38 (18%)
leucine-rich repeat 644..667 CDD:275380 4/22 (18%)
LRR_8 666..726 CDD:290566 14/59 (24%)
leucine-rich repeat 668..691 CDD:275380 6/22 (27%)
leucine-rich repeat 692..715 CDD:275380 3/22 (14%)
LRR_8 714..774 CDD:290566 24/65 (37%)
leucine-rich repeat 716..739 CDD:275380 6/22 (27%)
leucine-rich repeat 740..761 CDD:275380 11/26 (42%)
leucine-rich repeat 764..789 CDD:275380 7/24 (29%)
leucine-rich repeat 790..810 CDD:275380 3/21 (14%)
leucine-rich repeat 818..850 CDD:275380 7/31 (23%)
leucine-rich repeat 863..883 CDD:275378 3/22 (14%)
LRR_RI <878..1070 CDD:238064 44/157 (28%)
LRR_8 884..944 CDD:290566 21/59 (36%)
LRR_4 884..925 CDD:289563 16/40 (40%)
leucine-rich repeat 884..907 CDD:275380 8/22 (36%)
leucine-rich repeat 908..933 CDD:275380 8/24 (33%)
leucine-rich repeat 934..955 CDD:275380 8/22 (36%)
leucine-rich repeat 958..982 CDD:275380 9/32 (28%)
leucine-rich repeat 983..1055 CDD:275380 8/41 (20%)
leucine-rich repeat 1009..1033 CDD:275380 2/15 (13%)
leucine-rich repeat 1058..1085 CDD:275380
TPKR_C2 1121..1168 CDD:301599
tlr8bNP_001373638.1 leucine-rich repeat 36..57 CDD:275380 6/24 (25%)
leucine-rich repeat 58..78 CDD:275380 7/24 (29%)
LRR_8 64..116 CDD:404697 13/56 (23%)
leucine-rich repeat 79..105 CDD:275380 6/25 (24%)
leucine-rich repeat 106..121 CDD:275380 4/14 (29%)
LRR_8 126..190 CDD:404697 23/106 (22%)
leucine-rich repeat 127..150 CDD:275380 11/46 (24%)
leucine-rich repeat 151..179 CDD:275380 4/27 (15%)
PLN00113 180..>735 CDD:215061 173/721 (24%)
leucine-rich repeat 180..224 CDD:275380 12/65 (18%)
leucine-rich repeat 225..266 CDD:275380 14/103 (14%)
leucine-rich repeat 267..290 CDD:275380 12/23 (52%)
leucine-rich repeat 347..373 CDD:275380 8/25 (32%)
leucine-rich repeat 374..397 CDD:275380 7/22 (32%)
leucine-rich repeat 462..483 CDD:275380 8/38 (21%)
leucine-rich repeat 484..508 CDD:275380 5/28 (18%)
leucine-rich repeat 509..532 CDD:275380 6/22 (27%)
leucine-rich repeat 563..615 CDD:275380 12/54 (22%)
leucine-rich repeat 586..607 CDD:275380 4/23 (17%)
leucine-rich repeat 616..640 CDD:275380 8/46 (17%)
leucine-rich repeat 641..664 CDD:275380 3/22 (14%)
leucine-rich repeat 665..688 CDD:275380 8/22 (36%)
leucine-rich repeat 689..712 CDD:275380 8/24 (33%)
leucine-rich repeat 713..732 CDD:275380 6/18 (33%)
LRRCT 747..795 CDD:214507 13/59 (22%)
TIR 855..997 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.