DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and atk

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster


Alignment Length:1480 Identity:347/1480 - (23%)
Similarity:585/1480 - (39%) Gaps:392/1480 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLLACIAHLGHPILAWRPCPELSPALRLPCRCNVVPFAATGQLGAVAMDCDRVVFHGDAPQLPY 79
            :.||.||   |..::....||. |.|: |||||::     .|:  .:.:.|.    |.:.||:..
  Fly     6 IFLLLCI---GINLIRAESCPP-SQAI-LPCRCSL-----RGK--EIQIWCS----HSNLPQIMD 54

  Fly    80 GAPIVAYTQRHSGQ-----------QVLPAQTFGQLKLTIEELDLSYNLIRRIPEKAFDGLKDSL 133
            |  :.|..:...|:           ..||.:.||.|:  |..|.|.:|.|.|:.....:.|::.|
  Fly    55 G--LKAVERNIKGRIDELVLENNQLPALPGRFFGSLQ--IVRLMLRHNSIERVSNGWLNELENGL 115

  Fly   134 NELRLA----NNLLGDNLN------------------PIFS-----------TAEL-----HVLK 160
            .|:.:.    .::..::||                  |.||           |..|     |:.:
  Fly   116 VEIFVVEPQLRSIPAESLNGMINMLAITIQSEELKHLPDFSGLLSLTYLSVQTGALQELPSHLFR 180

  Fly   161 NLRLLD----LSGNKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALRHLSLRQNQI- 220
            :|..|.    ..|:.:..:|.||..|.:.||...:..|.|..:...:|:....|..|.|..||| 
  Fly   181 HLPKLQHIHITGGSGLTRLEAGLFDGLISLKNLDLSHNGLNWIHLRALSRLPNLVSLKLSHNQIS 245

  Fly   221 -----GSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFEKLQ 280
                 |.::.|    ...|:.:.|.:|:|..|:..:|..|..:.|:.|..|||:.|....|.:..
  Fly   246 DVGMVGRIVKD----LEHLKKLRLDNNLITVIEDGSFVDLPNLSELHLNDNRITELQYGAFLRTP 306

  Fly   281 SLQKLDLSENFFGQFPTVAL--AAVPGLKHLNLSSNMLQQLDYTHMQVVRS-------LESLDIS 336
            .|:.:.|..|...:....:|  |:..|::.:::.:|     :..|::.:|:       |..||:|
  Fly   307 QLKTIYLQNNLIRRIHPESLLQASGSGVEAVHMYNN-----EIGHVEALRALLDALPRLRYLDMS 366

  Fly   337 RNTITTITPGTFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNI---LLVPGSALGR 398
            .|.::.:..|..|..|.|:.|.|:.|.||.||.|||..:.:|:.|.:::|::   |.:|   ...
  Fly   367 GNLLSELPYGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLP---FWN 428

  Fly   399 LPQLTSLQLDYNRVAALSAEILGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLA 463
            ||.|..|.|..|:.|.:.:::|..|.:  :..|.||.|.:.||.|.||:....|.||::|.|.|.
  Fly   429 LPGLKGLDLAQNQFARVDSQLLAGLPS--LRRLDLSENGLIELAPNSFRHNPLLETLNISSNELT 491

  Fly   464 VINADTFAGLESTLMALKLSQNRLTG-LGGAPWVLPELRSLDLSGNTLTELPSTIFEELENVQSL 527
            .|::.|...|| .|..:..|.|:|.. :.|.|.:   :..:.|.||.:|.||:...::|:     
  Fly   492 KIHSSTLIHLE-RLFEVDASYNQLKSVIAGLPRI---VERISLKGNQITSLPAAASKDLQ----- 547

  Fly   528 NLSGNHLTPLTGALFKPLDRLQVIDLSGCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVN 592
                             |..|:::|||...|.|:......|..:|:.:.|..|:|::|:|.||:.
  Fly   548 -----------------LPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELRQLKDTSFIG 595

  Fly   593 LWNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYL 657
            :..:..:.|..|::|.....|.:.:.:|:.|:|..|:|.|....:|:..:.:|:||:|.|.:..:
  Fly   596 IQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRSI 660

  Fly   658 FPSSFRIHPRLREIRAANNKFSFFPAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVA 722
            .|::|.....|..:..:.|........| ..|..|..||||:||:..|:.........:..:.::
  Fly   661 SPTAFDTQRSLEYLDLSGNALLDISVGL-GNLNNLRDIDLSYNQISRIQSDVIGGWRNVVEIRLS 724

  Fly   723 NNQLDMVSEMAFHNSTQLQILDLAHNNLDRIGERTFEGLVRLEQLNLEGNRLSELSDGVFERTKL 787
            ||.:..:.:..|.|..:||.|||:.|.:..:.....:||..|::..|..|:|.||.|.|||    
  Fly   725 NNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADNKLVELKDHVFE---- 785

  Fly   788 QMLENINLAHNRFEYAPLNALQRQFFFVSS----VDLSHNKIKELPGDDSI----MVNIKRIDLS 844
               |..:|..:.|:|..|..:..:.|..::    ::||:|..:.:   ::|    |.|::.:|||
  Fly   786 ---ELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNM---ENIGLRSMRNLEVLDLS 844

  Fly   845 FN--------PLSSKAVHNVLNEPKTVRE--LSLAGTGIENLELLETPFLQFLNLSHNKLKNVKP 899
            .|        ||  ||: |.|.|.|....  ..:.|:..|.:     |.|:.|::.:|:|:::|.
  Fly   845 TNGVKLVSTMPL--KAL-NWLVELKMDNNQICRIQGSPFETM-----PRLRVLSMRNNQLRSIKE 901

  Fly   900 EVFQRVT-LLETLDLSSNQLESLEDLSMAWPQLQVLQSLDVSNNSFEIVSQSNF---------GK 954
            ..|:.|. .:..||:..|.::.  :..|.|  |.|.            :.::||         |:
  Fly   902 RTFRNVRGNIAILDVDGNPIDC--NCEMQW--LSVW------------LQETNFPYPGPKCQDGR 950

  Fly   955 LEMLRSLRLSHLPQCTRI-----EKNAFKQLPNL---VSLEAYDLP--------------LLGYL 997
            |  |||.|:.. ..|...     |:....|||.|   ..:...|||              |.|..
  Fly   951 L--LRSARMER-SLCVGADIYGNERTDGNQLPLLNEHGDVFQRDLPDDFNDECEAGEGTRLPGDR 1012

  Fly   998 DLQGILELLPGLEVLDIEVKD---SSIGSEQIQPLKHPRLKS----------------------- 1036
            .|.|..|......|...|..|   |:|.:.| :|...|.:.|                       
  Fly  1013 PLVGESEYFYDQYVDATEAPDTTHSAISTSQ-RPKPTPTINSNIDLNNTILHTKYFNRKPQPGSG 1076

  Fly  1037 --LGIRGDRLKSISSGTLAGLKSNDLSVQLRNTSLNALPPALLFPVPRSSHLSL----------- 1088
              ....|..|.|:|.|...|.  .|...:.|..|.:.:|     ...|.:|:||           
  Fly  1077 SPFTFFGYPLPSVSLGRFFGF--GDRGRKQRTDSNDDMP-----ATHRMAHISLPSGRGKTRMYQ 1134

  Fly  1089 -----------------------------------------NVEGSKITV--------------- 1097
                                                     |..||..|.               
  Fly  1135 PNSAEFEKYLKDQQKQEKLNIARNRYVDTDSTTSSMEDALSNESGSAATTVGVFRTTFREPSSIE 1199

  Fly  1098 ------LVPQFLNAL------EDRRASLQLQGLASNP--IVCDCNARALRRWLP----------- 1137
                  :||..:...      :.||..:::..:..||  ||   .....|:::|           
  Fly  1200 RGGFRPIVPAHVGGFMPVHDPQQRRGLVEVVNITGNPSEIV---QGIGQRKFIPISTQARPKPTK 1261

  Fly  1138 SSG-------------MPDVTCASPAYLLNRKLIEVGDDELTCDARRMTSSTSRPTASVPHLLKT 1189
            |||             .||:|..:|  |:.|         :.....:.:::|:|.|.:      |
  Fly  1262 SSGESSETATYEVTETTPDITTTTP--LMQR---------IATSTTKASTTTTRSTTT------T 1309

  Fly  1190 SSQLVT----RSSSTTE-------EPLIIWSLEPTQPPSLKKMKTKAPLM 1228
            |:..||    .:||:||       |.|...|:...:||.|.:..|...::
  Fly  1310 STTQVTPAENNASSSTELDSQYDDEDLEAQSVTLLRPPPLVQTTTAETIL 1359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 114/460 (25%)
leucine-rich repeat 109..132 CDD:275380 6/22 (27%)
leucine-rich repeat 133..161 CDD:275380 10/65 (15%)
leucine-rich repeat 162..185 CDD:275380 7/26 (27%)
leucine-rich repeat 186..209 CDD:275380 5/22 (23%)
leucine-rich repeat 210..233 CDD:275380 8/28 (29%)
leucine-rich repeat 234..257 CDD:275380 7/22 (32%)
PLN00113 237..>750 CDD:215061 143/525 (27%)
leucine-rich repeat 258..281 CDD:275380 7/22 (32%)
leucine-rich repeat 282..329 CDD:275380 8/48 (17%)
leucine-rich repeat 330..353 CDD:275380 7/22 (32%)
leucine-rich repeat 354..377 CDD:275380 11/22 (50%)
leucine-rich repeat 378..401 CDD:275380 6/25 (24%)
leucine-rich repeat 402..425 CDD:275380 7/22 (32%)
leucine-rich repeat 428..451 CDD:275380 9/22 (41%)
leucine-rich repeat 452..473 CDD:275380 8/20 (40%)
leucine-rich repeat 477..497 CDD:275378 6/20 (30%)
leucine-rich repeat 500..523 CDD:275380 7/22 (32%)
leucine-rich repeat 524..547 CDD:275380 1/22 (5%)
leucine-rich repeat 548..571 CDD:275380 7/22 (32%)
leucine-rich repeat 572..595 CDD:275380 8/22 (36%)
leucine-rich repeat 596..619 CDD:275380 4/22 (18%)
leucine-rich repeat 620..643 CDD:275380 7/22 (32%)
leucine-rich repeat 644..667 CDD:275380 7/22 (32%)
leucine-rich repeat 668..691 CDD:275380 4/22 (18%)
LRR <684..1020 CDD:443914 98/388 (25%)
leucine-rich repeat 692..715 CDD:275380 8/22 (36%)
leucine-rich repeat 716..739 CDD:275380 4/22 (18%)
leucine-rich repeat 740..761 CDD:275380 6/20 (30%)
leucine-rich repeat 764..789 CDD:275380 10/24 (42%)
leucine-rich repeat 790..810 CDD:275380 5/19 (26%)
leucine-rich repeat 818..850 CDD:275380 12/43 (28%)
leucine-rich repeat 863..883 CDD:275378 2/21 (10%)
leucine-rich repeat 884..907 CDD:275380 7/23 (30%)
leucine-rich repeat 908..933 CDD:275380 6/24 (25%)
leucine-rich repeat 934..955 CDD:275380 3/29 (10%)
leucine-rich repeat 958..982 CDD:275380 8/28 (29%)
leucine-rich repeat 983..1055 CDD:275380 23/116 (20%)
leucine-rich repeat 1009..1033 CDD:275380 7/26 (27%)
leucine-rich repeat 1058..1085 CDD:275380 5/26 (19%)
LRRCT 1121..1168 CDD:214507 15/72 (21%)
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 6/19 (32%)
PCC 891..>936 CDD:188093 12/60 (20%)
leucine-rich repeat 69..89 CDD:275380 4/19 (21%)
leucine-rich repeat 90..113 CDD:275380 7/22 (32%)
LRR 93..530 CDD:443914 117/454 (26%)
leucine-rich repeat 115..138 CDD:275380 4/22 (18%)
leucine-rich repeat 139..160 CDD:275380 3/20 (15%)
leucine-rich repeat 161..184 CDD:275380 4/22 (18%)
leucine-rich repeat 185..209 CDD:275380 6/23 (26%)
leucine-rich repeat 210..233 CDD:275380 5/22 (23%)
leucine-rich repeat 234..259 CDD:275380 8/28 (29%)
leucine-rich repeat 260..283 CDD:275380 7/22 (32%)
leucine-rich repeat 284..307 CDD:275380 7/22 (32%)
leucine-rich repeat 308..359 CDD:275380 9/55 (16%)
leucine-rich repeat 334..348 CDD:275378 2/18 (11%)
PLN00113 359..>824 CDD:215061 142/503 (28%)
leucine-rich repeat 360..383 CDD:275380 7/22 (32%)
leucine-rich repeat 384..407 CDD:275380 11/22 (50%)
leucine-rich repeat 408..431 CDD:275380 6/25 (24%)
leucine-rich repeat 432..455 CDD:275380 7/22 (32%)
leucine-rich repeat 456..476 CDD:275380 9/19 (47%)
leucine-rich repeat 480..501 CDD:275380 8/20 (40%)
leucine-rich repeat 505..517 CDD:275378 3/11 (27%)
leucine-rich repeat 525..550 CDD:275380 8/46 (17%)
leucine-rich repeat 551..574 CDD:275380 7/22 (32%)
leucine-rich repeat 575..598 CDD:275380 8/22 (36%)
leucine-rich repeat 599..622 CDD:275380 4/22 (18%)
leucine-rich repeat 623..646 CDD:275380 7/22 (32%)
leucine-rich repeat 647..670 CDD:275380 7/22 (32%)
leucine-rich repeat 671..693 CDD:275380 4/22 (18%)
leucine-rich repeat 694..717 CDD:275380 8/22 (36%)
leucine-rich repeat 718..741 CDD:275380 4/22 (18%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
leucine-rich repeat 766..789 CDD:275380 11/29 (38%)
leucine-rich repeat 790..813 CDD:275380 5/22 (23%)
leucine-rich repeat 814..835 CDD:275380 4/23 (17%)
leucine-rich repeat 838..861 CDD:275380 8/25 (32%)
leucine-rich repeat 862..885 CDD:275380 5/27 (19%)

Return to query results.
Submit another query.