DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and Lrrn4

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_796277.2 Gene:Lrrn4 / 320974 MGIID:2445154 Length:733 Species:Mus musculus


Alignment Length:629 Identity:145/629 - (23%)
Similarity:213/629 - (33%) Gaps:230/629 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   671 IRAANNKFSFFPAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQLDMVSEMAFH 735
            :..||......|:.|..||:.|   |.|||.|:.:.|....|||.||||.:.:|::.::      
Mouse    66 LNLANRSLESLPSCLPRTLRSL---DGSHNLLRALSEPVLGRLPELRVLTLHHNRISVL------ 121

  Fly   736 NSTQLQILDLAHNNLDRIGERTFEGLVRLEQLNLEGNRLSELSDGVFERTKLQMLENINLAHNRF 800
                       |...|.:.|                  |.||                       
Mouse   122 -----------HWGRDTLAE------------------LREL----------------------- 134

  Fly   801 EYAPLNALQRQFFFVSSVDLSHNKIKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVLNEPKTVRE 865
                              |||||.:.|||                 |.:..:       ..::|.
Mouse   135 ------------------DLSHNLLTELP-----------------PCAGPS-------GSSLRS 157

  Fly   866 LSLAGTGIENLELLET----PFLQFLNLSHNKLKNVKPEVFQRV-----TLLETLDLSSNQLESL 921
            |:|||..:..| |..|    |.|:.||||.::|.::..|.|..|     ..||.||||...||.:
Mouse   158 LALAGNPLRAL-LPRTFACFPALRLLNLSCSELGHIAQEAFAGVDGGPLAALELLDLSGTSLERV 221

  Fly   922 EDLSMAWPQLQVLQSLDVSNNSFEIVSQSNFGKLEMLRSLRLSHLPQCTRIEKNAFKQLPNLVSL 986
            |.   .|          :.|             |..|:||.|..:|:...:|.:.||..|||..|
Mouse   222 ES---GW----------IRN-------------LPKLKSLFLRKMPRLKTLEGDIFKMTPNLRQL 260

  Fly   987 EAYDLPLLGYLDLQGILELLPGLEVLDIE-VKDSSIGSEQIQPLKHPRLKSLGIRGDRLKSISSG 1050
            :..|.|.|..:..: |.:..|.|:||..: ...||.|     |....::.|:.:.|:.|  |.|.
Mouse   261 DCGDSPALTSVHTE-IFQDTPNLQVLQFQNCNLSSFG-----PWNSSQVLSVSLFGNPL--ICSC 317

  Fly  1051 TLAGLKSNDLSVQLRNTSLNALPPAL----LFPVPRS-SHLSLNVEGSKITVLVPQFLNALEDRR 1110
            .||.|..:.....|...:.....|||    .|..|.| ||||......:.|.|:|          
Mouse   318 ELAWLLVDVNKTVLHRAADTMCEPALGSTGPFSGPLSLSHLSNVCRSDQSTTLLP---------- 372

  Fly  1111 ASLQLQGLASNPIVCDCNARALRRWLPS------------------SGMPDVTCASP-------- 1149
                     |||...|.:..|.|...||                  :.:|.:|..||        
Mouse   373 ---------SNPGRFDHSVFAPRIQGPSIEQSTALSAQPGGSQQNITKVPSLTMTSPTQGSWMYK 428

  Fly  1150 ------AYLLNRKLIEVGDDELTCDARRMTSSTSRPTASVPHLLKTSSQLVTRSSSTTEEPLIIW 1208
                  |...|.:|:             .:.|.:.|.|:.....:|::.::..:.|:...||:..
Mouse   429 DASEETAQSTNSELV-------------YSPSRALPGAASSGAEQTATHILEPNISSASTPLVSK 480

  Fly  1209 SLE--PTQP-----PSLKKMKTKAPLM------KAQSPIISNDD 1239
            .||  ||.|     |..|:.....|..      :.:.|::..||
Mouse   481 YLEPLPTSPNPRSLPQTKQRTQATPRALHTDPPQDEIPVLLLDD 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 22/78 (28%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380
leucine-rich repeat 330..353 CDD:275380
leucine-rich repeat 354..377 CDD:275380
leucine-rich repeat 378..401 CDD:275380
leucine-rich repeat 402..425 CDD:275380
leucine-rich repeat 428..451 CDD:275380
leucine-rich repeat 452..473 CDD:275380
leucine-rich repeat 477..497 CDD:275378
leucine-rich repeat 500..523 CDD:275380
leucine-rich repeat 524..547 CDD:275380
leucine-rich repeat 548..571 CDD:275380
leucine-rich repeat 572..595 CDD:275380
leucine-rich repeat 596..619 CDD:275380
leucine-rich repeat 620..643 CDD:275380
leucine-rich repeat 644..667 CDD:275380
leucine-rich repeat 668..691 CDD:275380 6/19 (32%)
LRR <684..1020 CDD:443914 83/345 (24%)
leucine-rich repeat 692..715 CDD:275380 9/22 (41%)
leucine-rich repeat 716..739 CDD:275380 5/22 (23%)
leucine-rich repeat 740..761 CDD:275380 3/20 (15%)
leucine-rich repeat 764..789 CDD:275380 3/24 (13%)
leucine-rich repeat 790..810 CDD:275380 0/19 (0%)
leucine-rich repeat 818..850 CDD:275380 9/31 (29%)
leucine-rich repeat 863..883 CDD:275378 8/23 (35%)
leucine-rich repeat 884..907 CDD:275380 9/27 (33%)
leucine-rich repeat 908..933 CDD:275380 10/24 (42%)
leucine-rich repeat 934..955 CDD:275380 1/20 (5%)
leucine-rich repeat 958..982 CDD:275380 8/23 (35%)
leucine-rich repeat 983..1055 CDD:275380 21/72 (29%)
leucine-rich repeat 1009..1033 CDD:275380 7/24 (29%)
leucine-rich repeat 1058..1085 CDD:275380 7/31 (23%)
LRRCT 1121..1168 CDD:214507 14/78 (18%)
Lrrn4NP_796277.2 LRR 1 62..82 4/15 (27%)
leucine-rich repeat 63..83 CDD:275380 4/16 (25%)
LRR 64..>313 CDD:443914 92/382 (24%)
LRR 2 83..106 10/25 (40%)
leucine-rich repeat 84..107 CDD:275380 10/25 (40%)
LRR 3 107..128 7/37 (19%)
leucine-rich repeat 108..130 CDD:275380 7/38 (18%)
LRR 4 130..151 13/96 (14%)
leucine-rich repeat 131..154 CDD:275380 12/87 (14%)
LRR 5 154..175 8/21 (38%)
leucine-rich repeat 155..178 CDD:275380 8/23 (35%)
LRR 6 178..199 8/20 (40%)
leucine-rich repeat 179..207 CDD:275380 9/27 (33%)
LRR 7 207..230 11/48 (23%)
leucine-rich repeat 208..231 CDD:275380 12/48 (25%)
LRR 8 231..253 7/21 (33%)
leucine-rich repeat 232..256 CDD:275380 8/23 (35%)
LRR 9 256..278 7/22 (32%)
leucine-rich repeat 257..281 CDD:275380 6/24 (25%)
LRR 10 281..302 7/25 (28%)
leucine-rich repeat 303..315 CDD:275378 3/13 (23%)
Herpes_TAF50 <347..541 CDD:308764 43/210 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..423 4/27 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..518 8/37 (22%)
FN3 577..656 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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