DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and lron-6

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_491851.3 Gene:lron-6 / 185427 WormBaseID:WBGene00018157 Length:594 Species:Caenorhabditis elegans


Alignment Length:488 Identity:124/488 - (25%)
Similarity:195/488 - (39%) Gaps:108/488 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 KYLDLSLNSLRTI-EDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQ-LTSL----------QL 407
            |:||...|||..| ....|...|:..|::|:::|..|.....||...: :|||          .:
 Worm    78 KWLDHKPNSLPMICRQPNLPNPDAPYTIVIENSNESLTHSFLLGSCSKTVTSLTFQHYHKLYDSI 142

  Fly   408 DYN----RVAALSAEIL--------GSLQ------------------------AGDITTLSLSRN 436
            |:.    |:|:....:|        |||:                        ...||.:.:..:
 Worm   143 DFGECFPRLASFQVVLLQRTKANFHGSLRNLKNLKVLSLVNVDFDFWLQPSPFINTITYIHIENS 207

  Fly   437 VIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRLTGLGGAPWVLPELR 501
            .|.|||.. .....||.|:.|.|.|::.:   |.......:.:||||.|.:..|....:|.|.|.
 Worm   208 SITELPKW-LSTSKSLSTVYLKGTSISSL---TPVAQLPAVKSLKLSHNLIENLHRLLFVSPFLI 268

  Fly   502 SLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLD---RLQVIDLSGCNIRQISG 563
            .:|||.|.:|...|..|.:..:::.|:|:||   |:....:||..   :|:.:.||..||..::.
 Worm   269 HVDLSYNQITSFASHTFSKCIDLRVLDLTGN---PIKMLPYKPFAKNIKLKWLKLSRTNITTLTP 330

  Fly   564 DLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHGN 628
            |...||..||.:.|:...:|.:...|||.|.::..:|:.:..:..|......| ..|.:|::..|
 Worm   331 DHFYGLNALKTLSLSRMPIQSISPYSFVPLKSLRYLDMDSCNLTKIPQAVTAN-CHLARLNVANN 394

  Fly   629 QL---SAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIHPR-------------------LRE- 670
            .|   |:...|.....:|:.:|.|..|.|:. ||:||.:..|                   ||| 
 Worm   395 MLHRSSSMPPEVMAMLSGLSQLRIEGNPLTE-FPASFLLISRENFRLLRQLLHSTMTLPVWLREP 458

  Fly   671 ----------IRAANNKFSFF-----PAELISTLQYL-EHIDLSHNQLKTIEELD----FARLPR 715
                      ....||..||.     ...|.|.|.|. |..|....|::...||:    ...|.|
 Worm   459 CTPYYWSMHLANRTNNLKSFVNQYSEMRMLKSGLGYCKEQYDWMLEQMEVYRELEKNSGCYSLRR 523

  Fly   716 LRVLLVANNQLDMVSEMAFHNSTQLQILDLAHN 748
            ||..| ::..:..:|:    |||...||.:.|:
 Worm   524 LRSSL-SSKPVPKISK----NSTNSLILSIPHD 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 19/66 (29%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 124/488 (25%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380
leucine-rich repeat 330..353 CDD:275380
leucine-rich repeat 354..377 CDD:275380 8/22 (36%)
leucine-rich repeat 378..401 CDD:275380 6/22 (27%)
leucine-rich repeat 402..425 CDD:275380 10/68 (15%)
leucine-rich repeat 428..451 CDD:275380 6/22 (27%)
leucine-rich repeat 452..473 CDD:275380 6/20 (30%)
leucine-rich repeat 477..497 CDD:275378 6/19 (32%)
leucine-rich repeat 500..523 CDD:275380 8/22 (36%)
leucine-rich repeat 524..547 CDD:275380 7/25 (28%)
leucine-rich repeat 548..571 CDD:275380 8/22 (36%)
leucine-rich repeat 572..595 CDD:275380 8/22 (36%)
leucine-rich repeat 596..619 CDD:275380 3/22 (14%)
leucine-rich repeat 620..643 CDD:275380 6/25 (24%)
leucine-rich repeat 644..667 CDD:275380 8/22 (36%)
leucine-rich repeat 668..691 CDD:275380 10/38 (26%)
LRR <684..1020 CDD:443914 21/70 (30%)
leucine-rich repeat 692..715 CDD:275380 6/27 (22%)
leucine-rich repeat 716..739 CDD:275380 6/22 (27%)
leucine-rich repeat 740..761 CDD:275380 3/9 (33%)
leucine-rich repeat 764..789 CDD:275380
leucine-rich repeat 790..810 CDD:275380
leucine-rich repeat 818..850 CDD:275380
leucine-rich repeat 863..883 CDD:275378
leucine-rich repeat 884..907 CDD:275380
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
LRRCT 1121..1168 CDD:214507
lron-6NP_491851.3 LRR 158..478 CDD:443914 80/328 (24%)
leucine-rich repeat 200..221 CDD:275380 5/21 (24%)
leucine-rich repeat 222..243 CDD:275380 6/23 (26%)
leucine-rich repeat 244..265 CDD:275380 7/20 (35%)
leucine-rich repeat 267..290 CDD:275380 8/22 (36%)
leucine-rich repeat 291..314 CDD:275380 7/25 (28%)
leucine-rich repeat 315..338 CDD:275380 8/22 (36%)
leucine-rich repeat 339..362 CDD:275380 8/22 (36%)
leucine-rich repeat 363..385 CDD:275380 3/22 (14%)
leucine-rich repeat 386..412 CDD:275380 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.