DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and lrrc66

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001429408.1 Gene:lrrc66 / 101882481 ZFINID:ZDB-GENE-070705-240 Length:2562 Species:Danio rerio


Alignment Length:1137 Identity:226/1137 - (19%)
Similarity:387/1137 - (34%) Gaps:353/1137 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 FPTVALAAVPGLKH----LNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREMGALK 355
            ||:.| ..:|.|..    ||.||   ..|:.....:..|..||:||.|.::::.|.:|..:....
Zfish    23 FPSSA-CPIPCLCQPGPVLNCSS---LGLNKAPSWIPESAVSLNISNNALSSLAPLSFGHVKLKG 83

  Fly   356 YLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNRVAALSAEIL 420
            .|.|.:.|         .||:||        :::|.||:.                 ...|||..
Zfish    84 LLHLWVGS---------NGLESL--------SLILGPGTR-----------------TLSSAEQE 114

  Fly   421 GSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQN 485
            .|..|.|:..||..||.::.||.| .....||..|.||.|.::||:....... |.|..|.|..|
Zfish   115 CSSWAPDLQLLSAERNHLKRLPNG-LGCIKSLQILQLSYNQISVISLSDLDNC-SHLKELHLQHN 177

  Fly   486 RLTGLGGAPWV-LPELRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQ 549
            .:|.:....:. |.:|:.||||.|.|..:|...::.|.|:.:|                      
Zfish   178 SITTIHPHAFKDLQQLKVLDLSYNLLVTVPVPAYQSLRNLDAL---------------------- 220

  Fly   550 VIDLS------GCNIRQI----SGDLLAGLQDLK--------H-----IYLNDNQL-----QELQ 586
             :|:|      .||::.:    |.|...|....|        |     :||||::|     :...
Zfish   221 -VDVSFNRWKCDCNLQTLRKWMSFDTEMGHASWKVVCASPPHHAGKDLLYLNDSELTCPTYEHRT 284

  Fly   587 DGSFVNL------------------------WNISSIDLSN------NRIGSIRSGAFVNVMKLQ 621
            .|.:.|:                        |.....:..|      ..|....:|.::.:..:|
Zfish   285 SGHYHNMIVKEGMQISIPCRNHSQGIMQVRWWTPQGQEKDNQPELLIKDITEQHAGLYICITGVQ 349

  Fly   622 KLDLHGNQLSAFKGEYFNTGTGI----EELDISDNQLSYLFPSSFRIHPRLREIRAANNKF---- 678
                 |..:|.|....:..|.|.    |...|.|.:.:.:.|.    :|.:|......::|    
Zfish   350 -----GEHISVFDLHVYKKGGGSRLRREAGVILDEKGNVILPK----NPAVRVGSRTESEFILAV 405

  Fly   679 ------SFFPAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQLDMVSEMAFHNS 737
                  :|..|.::..:            |:.:.:..:.|:...|  ...::.........:.|.
Zfish   406 CLSVIITFILAFILGVV------------LRPLLDKLWRRIRSKR--QSTSSPTSSTEPQPYVNE 456

  Fly   738 TQLQILDLAHNNLDRIGERTFEG-----------LVRLEQLNLEGNRLSEL-SDGVFERT----- 785
            ....:.|  |:...|:|.|...|           .|.:::...:|:..|.. |.|::|..     
Zfish   457 GYCDVED--HDREVRVGSRVTFGEVTEVQDQMPYYVTVDEDQADGSSESNTESGGLYEDVENNRS 519

  Fly   786 -----KLQMLENINLAHNRFEYAPLNALQR---QFFFVSSVDLSHNKIKELP----GDDSIMVNI 838
                 |.|.|| :.....|.:.:..::||.   ....|:...|..:.::::.    .|::.:..|
Zfish   520 SVTDEKQQTLE-MERHRGRADSSGSSSLQEGEVNALVVNGQKLPPSSMEDMEFEPIPDETEITRI 583

  Fly   839 KRIDLSFN--------PLSSKAVHNVLN--EPKTVRELSLAGTGIENLELLETPFLQF-LNLSHN 892
            ||.|.|..        .|||:..|:...  :|..|.:..:.|       .::.||.:: :.|...
Zfish   584 KRRDSSSASSHSSQEVTLSSEIKHSTEQSVDPSPVAKSEIPG-------FIKEPFSEWPVRLKEQ 641

  Fly   893 KLKNVKPEVFQRVTLLETLDLS-SNQLESLEDLSM-----------AWPQLQVLQ-----SLDVS 940
            .:..:.||::....  |:...: .::..|:.|||.           .|.|::|..     ::| |
Zfish   642 NVDELDPEMWNDSG--ESFSFNEDSERSSIHDLSSPALGHPLKDDDKWRQIKVASPSNKINID-S 703

  Fly   941 NNSFEIVSQSNFGKLEML----RSLRLS-HLPQCTRIEK-------NAFKQLPNLVSL------- 986
            ::.||    ..||| |:|    :....| :...|...:.       |.:...|.|..:       
Zfish   704 DDDFE----KPFGK-EVLVDGGKQFEFSDNGSSCNSSQSGESVGGPNNYTVNPELEEIVDESDTG 763

  Fly   987 ---EAYDLPLLGYLDLQGILELLPG-----------LEVLDIEV--------------KDSSIGS 1023
               ...:|...|.|:.....|.:|.           ||..||.:              .|||:.|
Zfish   764 NGANVVNLNRFGTLEDPTFRETMPSAGILIRQETIILEPSDIHLTFTHGNSVDEGMLTDDSSMSS 828

  Fly  1024 EQIQPLKHPRLKSLGI----RGDRLKSISSGTLAGLKSNDLSVQLRNTSLNALPPALLFPVPRSS 1084
            ....|.:..:...:||    :..|.....|.     ||:..|           ||          
Zfish   829 LMNIPHQSGQFADIGIDTVPKDKRYVEFKSS-----KSHSGS-----------PP---------- 867

  Fly  1085 HLSLNVEGSKITVLVPQFL-------NALEDRRASLQLQGLASNPIVCDCNARALRRWL---PSS 1139
               |:....|..:|..:.|       .:.||..:.:|.|       |...|.:.::|::   ||.
Zfish   868 ---LSPSSQKNNILSKEHLISEAHTGASFEDNSSLMQRQ-------VSPDNIQKVKRYIGFNPSD 922

  Fly  1140 GMPDV-TCASPAYLLNRKLIEV--------GDDELTC--DARRMTSSTSRPTASVPHLLK----- 1188
              |.. |..||:......|:|.        .|.:||.  |...:|:|.....:.|...:.     
Zfish   923 --PHTQTLPSPSLTKKDALLETKRYSLSSDDDAQLTTKDDKSFLTTSIPSDVSKVKRYISFKQFD 985

  Fly  1189 TSSQLVTRSSSTTEEPLIIWSLEPTQPPSLKK 1220
            |||..:..|.|.|.....|.:|:|:...::|:
Zfish   986 TSSPTLPLSKSETTTEATIQNLQPSSSQNVKE 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 28/118 (24%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 108/531 (20%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380 10/37 (27%)
leucine-rich repeat 330..353 CDD:275380 7/22 (32%)
leucine-rich repeat 354..377 CDD:275380 5/22 (23%)
leucine-rich repeat 378..401 CDD:275380 4/22 (18%)
leucine-rich repeat 402..425 CDD:275380 4/22 (18%)
leucine-rich repeat 428..451 CDD:275380 7/22 (32%)
leucine-rich repeat 452..473 CDD:275380 7/20 (35%)
leucine-rich repeat 477..497 CDD:275378 5/20 (25%)
leucine-rich repeat 500..523 CDD:275380 9/22 (41%)
leucine-rich repeat 524..547 CDD:275380 1/22 (5%)
leucine-rich repeat 548..571 CDD:275380 7/32 (22%)
leucine-rich repeat 572..595 CDD:275380 9/64 (14%)
leucine-rich repeat 596..619 CDD:275380 3/28 (11%)
leucine-rich repeat 620..643 CDD:275380 5/22 (23%)
leucine-rich repeat 644..667 CDD:275380 4/26 (15%)
leucine-rich repeat 668..691 CDD:275380 4/32 (13%)
LRR <684..1020 CDD:443914 75/439 (17%)
leucine-rich repeat 692..715 CDD:275380 2/22 (9%)
leucine-rich repeat 716..739 CDD:275380 2/22 (9%)
leucine-rich repeat 740..761 CDD:275380 6/31 (19%)
leucine-rich repeat 764..789 CDD:275380 6/35 (17%)
leucine-rich repeat 790..810 CDD:275380 4/19 (21%)
leucine-rich repeat 818..850 CDD:275380 8/43 (19%)
leucine-rich repeat 863..883 CDD:275378 2/19 (11%)
leucine-rich repeat 884..907 CDD:275380 3/23 (13%)
leucine-rich repeat 908..933 CDD:275380 7/36 (19%)
leucine-rich repeat 934..955 CDD:275380 6/25 (24%)
leucine-rich repeat 958..982 CDD:275380 4/35 (11%)
leucine-rich repeat 983..1055 CDD:275380 19/110 (17%)
leucine-rich repeat 1009..1033 CDD:275380 9/37 (24%)
leucine-rich repeat 1058..1085 CDD:275380 3/26 (12%)
LRRCT 1121..1168 CDD:214507 14/60 (23%)
lrrc66NP_001429408.1 None
Blue background indicates that the domain is not in the aligned region.

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