DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and lrrn1

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:XP_002938357.1 Gene:lrrn1 / 100492182 XenbaseID:XB-GENE-18030784 Length:718 Species:Xenopus tropicalis


Alignment Length:31 Identity:11/31 - (35%)
Similarity:15/31 - (48%) Gaps:1/31 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 WFRGPHGQFYSLSESLTHGDGAPYWYSGIAL 402
            |.:.|.|.|.....|...|| .||:|:.:.|
 Frog   445 WNKHPGGLFVLPQYSSYLGD-FPYYYANLGL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 11/31 (35%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 11/31 (35%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380
leucine-rich repeat 330..353 CDD:275380
leucine-rich repeat 354..377 CDD:275380 1/4 (25%)
leucine-rich repeat 378..401 CDD:275380 8/22 (36%)
leucine-rich repeat 402..425 CDD:275380 1/1 (100%)
leucine-rich repeat 428..451 CDD:275380
leucine-rich repeat 452..473 CDD:275380
leucine-rich repeat 477..497 CDD:275378
leucine-rich repeat 500..523 CDD:275380
leucine-rich repeat 524..547 CDD:275380
leucine-rich repeat 548..571 CDD:275380
leucine-rich repeat 572..595 CDD:275380
leucine-rich repeat 596..619 CDD:275380
leucine-rich repeat 620..643 CDD:275380
leucine-rich repeat 644..667 CDD:275380
leucine-rich repeat 668..691 CDD:275380
LRR <684..1020 CDD:443914
leucine-rich repeat 692..715 CDD:275380
leucine-rich repeat 716..739 CDD:275380
leucine-rich repeat 740..761 CDD:275380
leucine-rich repeat 764..789 CDD:275380
leucine-rich repeat 790..810 CDD:275380
leucine-rich repeat 818..850 CDD:275380
leucine-rich repeat 863..883 CDD:275378
leucine-rich repeat 884..907 CDD:275380
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
LRRCT 1121..1168 CDD:214507
lrrn1XP_002938357.1 LRRNT 33..76 CDD:214470
leucine-rich repeat 75..97 CDD:275378
LRR <76..>323 CDD:443914
leucine-rich repeat 98..121 CDD:275380
leucine-rich repeat 122..145 CDD:275380
leucine-rich repeat 146..169 CDD:275380
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..217 CDD:275380
leucine-rich repeat 218..241 CDD:275380
leucine-rich repeat 242..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 313..374 CDD:404697
leucine-rich repeat 315..336 CDD:275380
leucine-rich repeat 340..363 CDD:275378
leucine-rich repeat 364..376 CDD:275378
LRRCT 372..418 CDD:214507
I-set 431..518 CDD:400151 11/31 (35%)
Ig strand B 445..449 CDD:409353 1/3 (33%)
Ig strand C 458..467 CDD:409353 3/9 (33%)
Ig strand E 484..488 CDD:409353
Ig strand F 498..503 CDD:409353
FN3 538..602 CDD:473895
Blue background indicates that the domain is not in the aligned region.

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