DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7896 and lrrc32

DIOPT Version :10

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:XP_004912272.1 Gene:lrrc32 / 100489763 XenbaseID:XB-GENE-994459 Length:666 Species:Xenopus tropicalis


Alignment Length:624 Identity:174/624 - (27%)
Similarity:279/624 - (44%) Gaps:136/624 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 ITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQN------- 485
            |.||.||.|.:..:.......:|.|.:||||.|.|:.|...:|..:.. |..:.||.|       
 Frog    52 IQTLDLSHNDLENITEDHLMKYSFLESLDLSSNQLSFIQPHSFRKMHK-LKEINLSGNDLDSFVH 115

  Fly   486 -RLTGLGGAPWVLPELRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQ 549
             |::|:|    |||.:::||||.|:|                       ...:.|...:...|||
 Frog   116 HRVSGIG----VLPYVQTLDLSRNSL-----------------------YNDMIGYFLQEAPRLQ 153

  Fly   550 VIDLSGCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAF 614
            .:.|...:|..||.||..|...|..:.|::|.:.::::|||..|.::|.||||.|.|..|..   
 Frog   154 YLSLHENSITTISSDLFQGSPLLAEVDLHNNIIMDIEEGSFEYLKHLSMIDLSMNSITCISD--- 215

  Fly   615 VNVMKLQKLDLHGNQLSAF-----KGEYFNTGTGIEELDISDNQLSYLFPSSFRIHPRLRE---I 671
            .|:.:|:.|:|..|.:..|     :.||.     :|::|:|.|:|     |||...||:..   |
 Frog   216 FNLRQLKVLNLSKNSIKTFHTPDSEDEYL-----LEKVDLSHNKL-----SSFPQLPRVNNVIFI 270

  Fly   672 RAANN----------------KFSF---FPAE---LIST--LQYLEHIDLSHNQLKTIEELDFAR 712
            ..:.|                .:||   |..:   .|||  |..|.|:|||:|.:|:|.:..|..
 Frog   271 DLSKNYIHLGTETPGEDPDWMNYSFQLEFEEQNPKNISTVPLPKLNHLDLSYNSIKSIPDDFFLT 335

  Fly   713 LPRLRVLLVANNQLDMVSEMAFHNSTQLQILDLAHNNLDRIGERTFEGLVRLEQLNLEGNRLSEL 777
            :|.|..|.::.|.:.::|...|...:.|..|||:.|::..:.... ..|..|::|.|:.|:|..|
 Frog   336 MPSLTFLNLSKNCIQVLSLGHFSGLSSLATLDLSANSIQNLSLGA-NSLPSLQRLYLQHNQLRLL 399

  Fly   778 SDGVFERTKLQMLENINLAHNRFEY-----APLNALQR----------QFFFVSS---VDLSHNK 824
            ...:|:|     ||:|.|.|.:..:     |.|...:|          :||.:.:   ::|..|.
 Frog   400 EPRIFQR-----LESIVLLHLQGNHVGPCMAGLGKAKRRTHAEEYRCVEFFNIPTLQHLNLRENM 459

  Fly   825 IKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVL-NEPKTVRELSLAGTGIENLELLETPF---LQ 885
            |:.:|.......::|.:|||.| |..|...|.| ...||:..|.:.|.|:.:|. ::.|.   |:
 Frog   460 IQRIPASAFWGTSLKVLDLSMN-LGIKVKPNALFGLEKTLEVLFMEGNGLPSLN-VDLPLFTHLK 522

  Fly   886 FLNLSHNKLKNVKPEVFQRVTLLETLDLSSNQLESLEDLSMAWPQLQVLQSLDVSNNSFEIVSQS 950
            :||||.|:|..: || :.....|||||||.|....||           :.::.|..|:.:.:|. 
 Frog   523 YLNLSGNQLSEL-PE-WNSDCRLETLDLSLNSFTGLE-----------VSNIPVLENTLKTLSL- 573

  Fly   951 NFGK-LEMLRSLRLSHLPQCTRIEKNAFKQLPNLVSLEA 988
             :|. |....:..:||:.:.|.:         .:|:|.|
 Frog   574 -YGNPLSCCANTWISHMIRRTAV---------TIVALNA 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 105/361 (29%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380
leucine-rich repeat 330..353 CDD:275380
leucine-rich repeat 354..377 CDD:275380
leucine-rich repeat 378..401 CDD:275380
leucine-rich repeat 402..425 CDD:275380
leucine-rich repeat 428..451 CDD:275380 6/22 (27%)
leucine-rich repeat 452..473 CDD:275380 9/20 (45%)
leucine-rich repeat 477..497 CDD:275378 7/27 (26%)
leucine-rich repeat 500..523 CDD:275380 6/22 (27%)
leucine-rich repeat 524..547 CDD:275380 1/22 (5%)
leucine-rich repeat 548..571 CDD:275380 9/22 (41%)
leucine-rich repeat 572..595 CDD:275380 7/22 (32%)
leucine-rich repeat 596..619 CDD:275380 9/22 (41%)
leucine-rich repeat 620..643 CDD:275380 7/27 (26%)
leucine-rich repeat 644..667 CDD:275380 8/22 (36%)
leucine-rich repeat 668..691 CDD:275380 9/49 (18%)
LRR <684..1020 CDD:443914 93/333 (28%)
leucine-rich repeat 692..715 CDD:275380 9/22 (41%)
leucine-rich repeat 716..739 CDD:275380 5/22 (23%)
leucine-rich repeat 740..761 CDD:275380 5/20 (25%)
leucine-rich repeat 764..789 CDD:275380 8/24 (33%)
leucine-rich repeat 790..810 CDD:275380 7/24 (29%)
leucine-rich repeat 818..850 CDD:275380 10/31 (32%)
leucine-rich repeat 863..883 CDD:275378 4/19 (21%)
leucine-rich repeat 884..907 CDD:275380 9/22 (41%)
leucine-rich repeat 908..933 CDD:275380 10/24 (42%)
leucine-rich repeat 934..955 CDD:275380 4/21 (19%)
leucine-rich repeat 958..982 CDD:275380 3/23 (13%)
leucine-rich repeat 983..1055 CDD:275380 3/6 (50%)
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
LRRCT 1121..1168 CDD:214507
lrrc32XP_004912272.1 LRR <52..354 CDD:443914 98/342 (29%)
leucine-rich repeat 52..75 CDD:275380 6/22 (27%)
leucine-rich repeat 76..99 CDD:275380 9/22 (41%)
leucine-rich repeat 100..151 CDD:275380 17/77 (22%)
leucine-rich repeat 152..175 CDD:275380 9/22 (41%)
leucine-rich repeat 176..199 CDD:275380 7/22 (32%)
leucine-rich repeat 200..220 CDD:275380 9/22 (41%)
leucine-rich repeat 245..314 CDD:275380 19/73 (26%)
LRR 300..>573 CDD:443914 84/293 (29%)
leucine-rich repeat 315..338 CDD:275380 9/22 (41%)
leucine-rich repeat 339..362 CDD:275380 5/22 (23%)
leucine-rich repeat 363..385 CDD:275380 6/22 (27%)
leucine-rich repeat 386..409 CDD:275380 9/27 (33%)
leucine-rich repeat 410..449 CDD:275380 8/38 (21%)
leucine-rich repeat 450..472 CDD:275380 4/21 (19%)
leucine-rich repeat 473..520 CDD:275380 16/48 (33%)
leucine-rich repeat 498..512 CDD:275378 3/13 (23%)
leucine-rich repeat 521..542 CDD:275380 9/22 (41%)
leucine-rich repeat 543..566 CDD:275380 11/33 (33%)
Blue background indicates that the domain is not in the aligned region.

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