DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7896 and islr2

DIOPT Version :9

Sequence 1:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster
Sequence 2:NP_001120371.1 Gene:islr2 / 100145445 XenbaseID:XB-GENE-5920691 Length:691 Species:Xenopus tropicalis


Alignment Length:281 Identity:70/281 - (24%)
Similarity:115/281 - (40%) Gaps:64/281 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 GLLKGCMD-------LKEFYID--RNSLTSVPTNSLNGPSALRHLSLRQNQIGSLLADSFNAQRQ 233
            ||..||.:       ..:.:.|  ...|..:|:..   ||.:..|||..|:|.||....      
 Frog    15 GLTLGCPEPCSCVDKYNQQFADCTYKKLQKIPSGF---PSNVTTLSLSANKITSLKKSD------ 70

  Fly   234 LEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDVFEKLQSLQKLDLSENFFGQFPTV 298
                              |.|:.::..:.||.|.||.:.......:.:|:.||:|.|...:||..
 Frog    71 ------------------FIGVPQVTSLWLAHNEISEIEEGALATMVNLKNLDVSHNLLVEFPWR 117

  Fly   299 ALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREMGALKYLDLSLN- 362
            .||::..|:.:.:::|.:..|.....|.:..|:||.|:.|..:.|..|||:.:.:|.::.:..| 
 Frog   118 DLASLSALQLIKMNNNRMVNLPRDAFQNLNELKSLRINNNQFSVIQEGTFKPLISLSHIQIYNNP 182

  Fly   363 -----SLRTIEDDALEGLDSLQTLIIKDNNILLVP----GSALGRLPQL----TSLQLDY--NRV 412
                 ||..::..|.|...|:..   |||.....|    |:.:.::|.|    .::||.|  |  
 Frog   183 FHCSCSLMWLKKWAEEAQFSVPE---KDNIACSSPEELKGTPISKIPDLPCEAPTVQLSYYPN-- 242

  Fly   413 AALSAEILGSLQAGDITTLSL 433
                   |.|.:..|..||||
 Frog   243 -------LDSTELYDGFTLSL 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7896NP_651754.1 LRR_8 109..172 CDD:290566
leucine-rich repeat 109..132 CDD:275380
LRR_RI <132..338 CDD:238064 40/168 (24%)
leucine-rich repeat 133..161 CDD:275380
LRR_8 160..220 CDD:290566 13/50 (26%)
leucine-rich repeat 162..185 CDD:275380 4/6 (67%)
leucine-rich repeat 186..209 CDD:275380 4/24 (17%)
leucine-rich repeat 210..233 CDD:275380 7/22 (32%)
LRR_8 232..290 CDD:290566 11/57 (19%)
leucine-rich repeat 234..257 CDD:275380 2/22 (9%)
leucine-rich repeat 258..281 CDD:275380 5/22 (23%)
LRR_RI 273..535 CDD:238064 47/177 (27%)
LRR_8 281..338 CDD:290566 17/56 (30%)
leucine-rich repeat 282..329 CDD:275380 13/46 (28%)
LRR_8 328..388 CDD:290566 19/65 (29%)
leucine-rich repeat 330..353 CDD:275380 9/22 (41%)
leucine-rich repeat 354..377 CDD:275380 6/28 (21%)
leucine-rich repeat 378..401 CDD:275380 5/26 (19%)
leucine-rich repeat 402..425 CDD:275380 7/28 (25%)
leucine-rich repeat 428..451 CDD:275380 4/6 (67%)
LRR_8 429..487 CDD:290566 4/5 (80%)
leucine-rich repeat 452..473 CDD:275380
leucine-rich repeat 477..497 CDD:275378
LRR_8 498..558 CDD:290566
leucine-rich repeat 500..523 CDD:275380
LRR_RI 502..769 CDD:238064
leucine-rich repeat 524..547 CDD:275380
leucine-rich repeat 548..571 CDD:275380
LRR_8 572..630 CDD:290566
leucine-rich repeat 572..595 CDD:275380
leucine-rich repeat 596..619 CDD:275380
LRR_8 619..678 CDD:290566
leucine-rich repeat 620..643 CDD:275380
leucine-rich repeat 644..667 CDD:275380
LRR_8 666..726 CDD:290566
leucine-rich repeat 668..691 CDD:275380
leucine-rich repeat 692..715 CDD:275380
LRR_8 714..774 CDD:290566
leucine-rich repeat 716..739 CDD:275380
leucine-rich repeat 740..761 CDD:275380
leucine-rich repeat 764..789 CDD:275380
leucine-rich repeat 790..810 CDD:275380
leucine-rich repeat 818..850 CDD:275380
leucine-rich repeat 863..883 CDD:275378
LRR_RI <878..1070 CDD:238064
LRR_8 884..944 CDD:290566
LRR_4 884..925 CDD:289563
leucine-rich repeat 884..907 CDD:275380
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
TPKR_C2 1121..1168 CDD:301599
islr2NP_001120371.1 leucine-rich repeat 36..52 CDD:275380 4/18 (22%)
LRR_8 51..111 CDD:290566 20/83 (24%)
LRR_4 52..92 CDD:289563 14/63 (22%)
leucine-rich repeat 53..76 CDD:275380 9/46 (20%)
LRR_4 75..115 CDD:289563 10/39 (26%)
leucine-rich repeat 77..100 CDD:275380 5/22 (23%)
LRR_8 100..159 CDD:290566 18/58 (31%)
leucine-rich repeat 101..124 CDD:275380 9/22 (41%)
leucine-rich repeat 125..148 CDD:275380 4/22 (18%)
leucine-rich repeat 149..172 CDD:275380 9/22 (41%)
LRRCT 181..>219 CDD:214507 10/40 (25%)
IG_like 251..341 CDD:214653 4/6 (67%)
Ig 254..338 CDD:143165 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24366
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.