DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TkR99D and Pgr15l

DIOPT Version :10

Sequence 1:NP_001263092.1 Gene:TkR99D / 43551 FlyBaseID:FBgn0004622 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001100053.1 Gene:Pgr15l / 296867 RGDID:1562685 Length:456 Species:Rattus norvegicus


Alignment Length:473 Identity:118/473 - (24%)
Similarity:211/473 - (44%) Gaps:70/473 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ALSTSSFNHSQTLSTDLPAVGDVEDAAEDAAASMETGSFAFVVPWW--------RQVLWSILFGG 110
            ::...|.||:....|::              :|.|.|.....|..|        .:::.:..:..
  Rat    31 SIEDQSCNHTTQNGTNI--------------SSAEWGGPRGTVTKWLGGNPHIMAKIVLTFAYAV 81

  Fly   111 MVIVATGGNLIVVWIVMTTKRMRTVTNYFIVNLSIADAMVSSLNVTFNYYYMLDSDWPFGEFYCK 175
            :::::..||.:|..:.:..|..:..|...|.||:|:|.::..||..|.....|...|.||...|.
  Rat    82 IIVISLFGNSLVCQVFVKHKETKKSTGLLIFNLAISDILIILLNSPFALARFLSGQWVFGRIMCH 146

  Fly   176 LSQFIAMLSICASVFTLMAISIDRYVAIIRPLQPRMSKRCNLAIAAVIWLASTLISCPMMIIYRT 240
            :|:|....|:..|..||||:::||:..|:.|::||::...:|.:..|||..:..::.|..|....
  Rat   147 VSRFAQYCSLHVSTLTLMAVAMDRHRVILHPMKPRLTHSQSLFVVGVIWSIAVFLALPHAIYQNL 211

  Fly   241 EEVPVRGLSNRTVCYPEWPDGPTNHSTMESLY-NILIIILTYFLPIVSMTVTYSRVGIELWGSKT 304
            ..:.......|:.|.|.:| ||   ||:.|.| ::...||.|.||::.:..|||.:|..||....
  Rat   212 FTLVNMDGDVRSYCLPSFP-GP---STLVSKYVDLGTFILLYILPLLVIVGTYSHLGKRLWIQNA 272

  Fly   305 IGECTPRQ-VENVRSKRRVVKMMIVVVLIFAICWLPFHSYFIITSCYPAITEAPFIQELYLAIYW 368
            ||:.:.|| :.:.:.:::.::|:|::||:||:||.|.:.|.::.|......::    .::.|.:|
  Rat   273 IGDASARQLMAHYQKRKKSIRMLILIVLVFAVCWFPLNFYVVLISSAGVENDS----VIFYAFHW 333

  Fly   369 LAMSNSMYNPIIYCWMNSRFRYGFKMV--FRWCLFVRVGTEPFSRRENLTSRYSCSGSPDHNRIK 431
            .|||::.|||.||||:|..||...:.:  ||                 :.|.:.||.|.......
  Rat   334 FAMSSTCYNPFIYCWLNRSFRAKLRSISSFR-----------------MQSLFVCSSSQVQQIQP 381

  Fly   432 RNDTQKSILYTCPSSPKSHRISHSGTGRSATLRNSLPAESLSSGGSGGGGHRKRLSYQQEMQQRW 496
            |               :||.:....|.....:..::|...:....|...|...::|.|.|    |
  Rat   382 R---------------ESHELRELRTSSLLRVPLAVPEPQVFEDPSLATGDNSQVSVQGE----W 427

  Fly   497 SGPNSATAVTNSSSTANT 514
            ..|:.:.......||.::
  Rat   428 EDPDPSLDEEPGPSTRDS 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR99DNP_001263092.1 7tmA_TACR 102..392 CDD:320512 89/291 (31%)
TM helix 1 103..129 CDD:320512 3/25 (12%)
TM helix 2 136..162 CDD:320512 9/25 (36%)
TM helix 3 174..204 CDD:320512 11/29 (38%)
TM helix 4 215..236 CDD:320512 5/20 (25%)
TM helix 5 269..298 CDD:320512 11/29 (38%)
TM helix 6 317..347 CDD:320512 10/29 (34%)
TM helix 7 360..385 CDD:320512 12/24 (50%)
Pgr15lNP_001100053.1 7tmA_GPR83 73..357 CDD:320511 89/291 (31%)
TM helix 1 74..100 CDD:320511 3/25 (12%)
TM helix 2 107..132 CDD:320511 9/24 (38%)
TM helix 3 145..175 CDD:320511 11/29 (38%)
TM helix 4 186..207 CDD:320511 5/20 (25%)
TM helix 5 237..266 CDD:320511 11/28 (39%)
TM helix 6 286..316 CDD:320511 10/29 (34%)
TM helix 7 325..350 CDD:320511 12/28 (43%)

Return to query results.
Submit another query.