DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR99D and npr-33

DIOPT Version :10

Sequence 1:NP_001263092.1 Gene:TkR99D / 43551 FlyBaseID:FBgn0004622 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_510612.1 Gene:npr-33 / 185141 WormBaseID:WBGene00009278 Length:399 Species:Caenorhabditis elegans


Alignment Length:367 Identity:91/367 - (24%)
Similarity:171/367 - (46%) Gaps:58/367 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 LWSILFG--GMVIVATG--GNLIVVWIV-MTTKRMRTVTNYFIVNLSIADAMVSSLNVTF----N 158
            |:.|:||  .|:|:..|  ||:.:|::: |..|.|.:..|.|::||:|||..    |:.|    .
 Worm    57 LYFIVFGLVFMIIICAGVIGNIFIVFVILMDRKLMSSSVNQFLLNLAIADLG----NLIFCSPDA 117

  Fly   159 YYYMLDSDWPFGEFYCKLSQFIAMLSICASVFTLMAISIDRYVAIIRPLQ-PRMSKRCNLAIAAV 222
            ...::|..|....|.|.|.:|:....:.|||...|||.::|::||..|:: .|.|.:..:::.|.
 Worm   118 ILVLIDRGWLLPNFACHLLRFLQEYFLYASVLLQMAIGVERFLAICSPMRMQRFSTKTTISVLAG 182

  Fly   223 IWLASTLISCPM-----MIIYRTEEVPVRGLSNRTVCYPEWPDGPTNHSTMESLYNILIIILTYF 282
            :|..:...:.|.     ::.::......:|:|::|..|                :....:|:.|.
 Worm   183 VWCVAACFASPYFLYQGIVFHKLYFCFWKGISHKTRTY----------------FKYCELIVLYA 231

  Fly   283 LPIVSMTVTYSRVGIELWGSKTIGECT--PRQVENVRSKRRVVKMMIVVVLIFAICWLPFHSYFI 345
            :|:|.:|..||.:...|||::......  .:|...::.:|.||||:|:.:|::.:|:.|....|:
 Worm   232 IPLVFLTTLYSIMCRVLWGNEDNHNIANHSQQEAILKLRRSVVKMLIISMLLYFLCYTPIQVLFM 296

  Fly   346 ITSCYPAITEAPFIQELYLAIYWLAMSNSMYNPIIY--CWMNSRFRY-----GFKMVFRWCLFVR 403
            :........:.|  |.|.|.:..|::.:|..|||:|  |..:.|.|.     |......|.|   
 Worm   297 LEKILDHSVQLP--QWLRLLLNVLSVMSSSTNPIVYIICCRHFRLRLRDVAAGISSFCCWLL--- 356

  Fly   404 VGTEPFSRR------ENLTSRYSCSGSPDHNRIKRNDTQKSI 439
               ..||:.      |::|::.|.|........:|.:::.::
 Worm   357 ---PSFSKSEYECVDESMTAKLSRSPYVSFRSSRRQNSRANL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR99DNP_001263092.1 7tmA_TACR 102..392 CDD:320512 81/312 (26%)
TM helix 1 103..129 CDD:320512 11/30 (37%)
TM helix 2 136..162 CDD:320512 9/29 (31%)
TM helix 3 174..204 CDD:320512 11/29 (38%)
TM helix 4 215..236 CDD:320512 3/25 (12%)
TM helix 5 269..298 CDD:320512 7/28 (25%)
TM helix 6 317..347 CDD:320512 10/29 (34%)
TM helix 7 360..385 CDD:320512 10/26 (38%)
npr-33NP_510612.1 7tm_classA_rhodopsin-like 62..334 CDD:410626 76/293 (26%)
TM helix 1 62..87 CDD:410626 8/24 (33%)
TM helix 2 94..121 CDD:410626 9/30 (30%)
TM helix 3 133..163 CDD:410626 11/29 (38%)
TM helix 4 175..194 CDD:410626 2/18 (11%)
TM helix 5 218..243 CDD:410626 7/40 (18%)
TM helix 6 268..298 CDD:410626 10/29 (34%)
TM helix 7 309..334 CDD:410626 9/24 (38%)

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