DRSC/TRiP Functional Genomics Resources

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Protein Alignment TkR99D and npr-16

DIOPT Version :10

Sequence 1:NP_001263092.1 Gene:TkR99D / 43551 FlyBaseID:FBgn0004622 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001355490.1 Gene:npr-16 / 180643 WormBaseID:WBGene00006864 Length:436 Species:Caenorhabditis elegans


Alignment Length:320 Identity:74/320 - (23%)
Similarity:140/320 - (43%) Gaps:59/320 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 MVIVATGG-NLIVVWIVMTTKRMRTVTNYFIVNLSIADAMVSSLNVTFNYYYMLD---------- 164
            :::||.|. |||::.:::|...:|::||.:::.|.:||           :.|:.|          
 Worm    27 LLLVALGSVNLIIILLIITRPYLRSITNVYMIGLCLAD-----------FIYLADLILVAATSLN 80

  Fly   165 -SDWPFGEFYCKLSQFIAMLSICASVFTLMAISIDRYVAIIRPLQPRMSKRCN--------LAIA 220
             ..||||...|.|..........|||..::.::.|||:|:.:      |..|.        :.::
 Worm    81 GKSWPFGPTICHLFHGTEATGKYASVLFVVLLAADRYIAMCK------SDLCGRYRTYRTAIFLS 139

  Fly   221 AVIWLASTLISCPMMIIYRTEEVPVR-----GL----SNRTVCYPEWPDGPTNHSTMESLYNILI 276
            .:.|:|:.:.|.|:.:.  .:|:.||     |.    :|.|:|...||..|  |:   ..|..:.
 Worm   140 GLAWIAAFICSLPLYVY--ADEIKVRMRPKNGTDSIENNHTLCIAHWPSPP--HA---QWYISVC 197

  Fly   277 IILTYFLPIVSMTVTYSRVGIELWGSKTIGECTPRQVENVRSK---RRVVKMMIVVVLIFAICWL 338
            .::.:.||.:.:...|..|..:|   :...:.:.|...|.||:   :||.:.:..|||...:||.
 Worm   198 SVMIFILPGLVIFYCYYHVFCKL---REAAKGSRRLHRNKRSRSSYQRVTRSVQRVVLFHLLCWS 259

  Fly   339 PFHSYFIITSCYPAITEAPFIQELYLAIYWLAMSNSMYNPIIYCWMNSRFRYGFKMVFRW 398
            ||..:.:.::.:........::.:...|:.....|...||::|.:....||..||.:..|
 Worm   260 PFWLFNLFSAIFRVRITTQLMRIIVNIIHLFPYVNCALNPVLYAYRAENFRTAFKSLLFW 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TkR99DNP_001263092.1 7tmA_TACR 102..392 CDD:320512 71/312 (23%)
TM helix 1 103..129 CDD:320512 6/18 (33%)
TM helix 2 136..162 CDD:320512 5/25 (20%)
TM helix 3 174..204 CDD:320512 9/29 (31%)
TM helix 4 215..236 CDD:320512 5/28 (18%)
TM helix 5 269..298 CDD:320512 5/28 (18%)
TM helix 6 317..347 CDD:320512 11/32 (34%)
TM helix 7 360..385 CDD:320512 5/24 (21%)
npr-16NP_001355490.1 7tm_classA_rhodopsin-like 45..305 CDD:410626 63/286 (22%)
TM helix 2 53..79 CDD:410626 7/36 (19%)
TM helix 3 91..121 CDD:410626 9/29 (31%)
TM helix 4 134..153 CDD:410626 3/18 (17%)
TM helix 5 190..215 CDD:410626 4/27 (15%)
TM helix 6 238..268 CDD:410626 9/29 (31%)
TM helix 7 281..305 CDD:410626 5/23 (22%)

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