Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013060.1 | Gene: | VPS13 / 850619 | SGDID: | S000003963 | Length: | 3144 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 4144 | Identity: | 738/4144 - (17%) |
---|---|---|---|
Similarity: | 1340/4144 - (32%) | Gaps: | 1530/4144 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIEFVAKLPDSESKQR-----RASFQREQRRKSKRESVEQPD--QTK 126
Fly 127 SPGPASSS-----------SVVNKIINNINLQCHNIILKYVEDDIV-------VSMNVQTLNFSS 173
Fly 174 AGEDWKPTMVDIHPVSVVMRKLLQVSDLTICL-------------------------------DK 207
Fly 208 RNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTST----------TRIGVFTKSLDIN---- 258
Fly 259 -VSSLQFPMVMRLVKMLLELKPA-EFEDDPQNPEDQEAVAEGSESQQGTESAGRSVFWWAWSLLP 321
Fly 322 SFDTEAPSSSCDTPTGHAFDLGVYAEELNFQLKNSEYFTDQSMGGIKRIRYTPILRISLGGLY-- 384
Fly 385 --YERTIL----KECDWANVKAGL--------SSMCMEPLGAYRS-----------------DDL 418
Fly 419 VDRNLVNTQEFQQERSFIDKSLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEH 483
Fly 484 RVPKPSSHPVAESQLRDLGVRIQYR---LLSAGITFHFSQSFVQVKKVISDLIRPYDYPGYRSES 545
Fly 546 MKDEDRGVPEPENKNSEMTIPDLEYLMGLVPTCNYKIELRNIVVQLYPRQQQDESSAINQHQLTT 610
Fly 611 TVRQSLLPYLQLKISLVEGTMCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKNLALMIMN 675
Fly 676 TTPDNGRAKLLNIPRVQVNWNRLLAPHLWRQNEAPLETSEIKSEIITLEFSKRELIIAKRLVPLI 740
Fly 741 SSFSGQDLCDLAHIVANVNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNI 805
Fly 806 RNVVLSTSKNADNKWLEMQCQFPLEEVHSEQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSG 870
Fly 871 RQITKDKEVETDLESVNQSEPPITQSVSNYSTISASAIAFNDFQPRRISRNNSRKISVPEETVHL 935
Fly 936 SSERDERHTQAEPLTIPVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRKTPGHTD 1000
Fly 1001 VEYTSIRLPHMKVKSGNCEAIQRGNIRGVIPVASNTELLNWVFDLNEFN-VCYRRANV----TEM 1060
Fly 1061 IIAP-VRTTITLALSFKTSDKVDGSKGKED-KCANTCSINVHVDMS---------AINIFAQRVK 1114
Fly 1115 L-------LHEHCL-IISKMYGSLCPDEPAS----KWQTG---KMKPRLEVYTGSA-------QN 1157
Fly 1158 YPVIKEFLELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSKIVMSL--EDLLLN 1220
Fly 1221 IDKHSDFNKITTKIENFGLNYYEEKHEEW-EKIDDLHIKMLGDSTNLPLISVVITTVSLEDL--- 1281
Fly 1282 -YAKIGARNPHNKQHTISEVLIEVQPIEMVLNLDQITEFMVPICEVLEIIGNS-ASAQSANKPSA 1344
Fly 1345 P-------------VPSKITTVQDLPMVHL--NSKGI-YVYLPLSTGKKSCSVLL-------LRI 1386
Fly 1387 ESIQLTPSLENPLVRQLV-RPDIYQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEY 1450
Fly 1451 R--IEKTLASKHDNPAFEWNNQSQSTELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCAT 1513
Fly 1514 DFVASLNTHQISLISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNISKYNSVDNSIYFPAD 1578
Fly 1579 PKVFKKDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLA 1643
Fly 1644 AEEINRSGRQPFVLSYPSSVSFVAGIFVLKIYDVLELEELERPVMKPLFLMTVSQPSFMSTQNFK 1708
Fly 1709 AAVTQASIFNVNISVAK----ADVDGKVDSERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLH 1769
Fly 1770 QKEVDVELRKPILLRICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNA 1834
Fly 1835 DR----FHLSCDRITAKFYDEERSY----KCSFVWLDVSTRIKFSSRPQKAVIRSNIGSFYVQSG 1891
Fly 1892 EKMLLHPLLMRLSVDLVSEPWSEELLVNATLKLNYLHIDAGVFSILQLQKAQQGVNRIREYADRE 1956
Fly 1957 WQQFLRSRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLNSES- 2020
Fly 2021 --VLPMPYQVQIIKKNYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEYF----SETHET 2079
Fly 2080 FLHYCDFMLSETSTKQLTPPDRPICATI----------WRVVILQ-SLISVDGTCFEGSEDEDLS 2133
Fly 2134 IEYLQSDFKVDENNDFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIELNFVNQTDNTGELP 2198
Fly 2199 KQLNKYRLRQTPNITQTFLTVHVEDLQMHSRIYSRNDFSLQTEMRARVKCLDYGFLNML------ 2257
Fly 2258 ----DVLEPMKFSSYVRLTDYPRSL--VQANFLVDKLRLNCGPHVIHTLLSSKYHWQEVLQQKDV 2316
Fly 2317 RHVLMPKLVIVNRIQTP----ISFGQTNTVEKIPVNPGEVQLYHFRSCSHVQELTFFITNPKTLL 2377
Fly 2378 VDSSDSVHIALKFEDEEKIHNLRVGEYCITLKLAKLSTTQIYILVKGQIELVSMVPFNLVTEFRE 2442
Fly 2443 EEI-----------NYDESTPPEHLLLSKERSSYYQ---NVKRNADINMRLKLTAGLGRGRTGDI 2493
Fly 2494 PLKTNNNLPWLVKVPTQSAQQFISIWVRILREDIKMDKPAEDFQPQKIL-ICIW----------- 2546
Fly 2547 -------------PIFEICNMLSCAVK---------------ATESTTGESSTIEAM-------- 2575
Fly 2576 -GGRWALNTATTHATEHNIGFTFSGILRGSSKDEYSLMLRTMDWHKFFYYDPTVW--TIENALHK 2637
Fly 2638 LGKSSKRKWPLNDP-------EELRVSRVLDFENAF--DVKYQTKATREFSCCQGLDVTAWGMFI 2693
Fly 2694 NGTGLYVAIFMIQEQARLD-LK-ANSLQMMP-KLKSAFTIDVRFDNGWKSSTPICLEDFTQKSSS 2755
Fly 2756 NAGRSLYLRYNSFVDIVIVERDEVLRLILEYRQEDDGR-RLFKLRSKFVFTNFTD----VVLNAL 2815
Fly 2816 TLAMDH--KENSTREEVEAYSICKKARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYF 2878
Fly 2879 VCFSVGGSREISIPIPLAVPFTRRCFSLQAGPESIPLMITLIEKDNVHYLNVFRDTAPAIVISNN 2943
Fly 2944 TNVKFIVAQTSASE----NSNVS-----CTN-------SEFVGRNFEWNQ--------------- 2977
Fly 2978 -----------LVLPHSNCYYTP-------PQMYANFPDVEFTMCNLS----LAVYKD------- 3013
Fly 3014 ---------KLCAKN--KIAWS----------------------------KPIRTDK-SWQK--- 3035
Fly 3036 --FLHVPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFSVKDLRSRLTKPENVLMPSQEQAAPRPDE 3098
Fly 3099 SSEQENDTKRVTLPNMVTCAHFNEECESKTQTRIKIFIKSFVFSLQTDNRENDFVKTEVCNIYAD 3163
Fly 3164 DSMLIYDDDDDQRELRLQLPNLQVDNQLYSSGKY-----------------DFPVLLCAEKLYRR 3211
Fly 3212 NCSLPQVYDLDHV------YKQQAQRTPV-SLFTFI--------------FYQDEMQLQNVRCQI 3255
Fly 3256 PPFRVYIEDAYLNQLLEALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQVVAQSLY-------- 3312
Fly 3313 ---ISE-PLRLNSFTVEPLNLLLSVHTSSRLYIALDHSPLSFSRYERQQILTVPLRFGQSLGLHY 3373
Fly 3374 LSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRG--PWGFLVGVTQGSASLLR 3436
Fly 3437 NVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRAR----------PQGFADGLTQGLTG 3491
Fly 3492 LGISLLGAVGGLAHHTLEARSSVGVIAGLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAM- 3555
Fly 3556 -------PQQVE-PSFIRNVALHGSSNRIW-------SYLPEELSRDQMLFFSEIMLQISTQLRP 3605
Fly 3606 ALLFLTSSVLAIMQSDSEDLAFASPISKVD-VLADREDPSKLYLSLKSE 3653 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 38/116 (33%) |
VPS13_C | 3319..3468 | CDD:293514 | 35/150 (23%) | ||
ATG_C | 3473..3546 | CDD:286423 | 20/82 (24%) | ||
VPS13 | NP_013060.1 | MRS6 | 1..2294 | CDD:227376 | 567/3215 (18%) |
MRS6 | <2356..3144 | CDD:227376 | 158/866 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157344433 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.960 |