Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001320409.1 | Gene: | AT1G48090 / 841226 | AraportID: | AT1G48090 | Length: | 4173 | Species: | Arabidopsis thaliana |
Alignment Length: | 4774 | Identity: | 841/4774 - (17%) |
---|---|---|---|
Similarity: | 1507/4774 - (31%) | Gaps: | 1768/4774 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFKLESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIH 65
Fly 66 ELSILVPWTKLMSEPVKIVINTIEFVAKLPDSESKQRRASFQREQRRKSKRESVEQPD------- 123
Fly 124 ---QTKSPGPASS--SSVVNKIINNINLQCHNIILKYVEDDIVVSMNVQTLNFSSAGEDWKPTMV 183
Fly 184 DIHP--VSVVMRKLLQVSDLTICLDKR-----NTAGRIEVCQEPVLYRCTLECRVLRKYNANTVS 241
Fly 242 TTSTTRIGVFTKSLD--INVSSLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQEAVAEGSESQQG 304
Fly 305 TESAGRSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGVYAEELNFQLK-----NSEYFTDQSM 364
Fly 365 GGIKRIRYTPILRISLGG-------LYYER----------TILKE--CDWANVKAGLSSMCMEPL 410
Fly 411 GAYRSDDLVD--RNLVNTQE-------FQQERSFIDKSLFDENYMFAERSWCSYN---------- 456
Fly 457 --YADYVARNTD---------EYMLFRSPVLAFDVIEH-RVPKPSSHPVAESQLRDLGVRIQYRL 509
Fly 510 LSAGITFHFSQSFVQVKKVISDLIRPYDYPGYRSESMKDEDRGVPEPENKNSEMTIPDLEYLMGL 574
Fly 575 VPTCNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSLLPYLQLKISLVEGTMCGPVNPVR 639
Fly 640 LVQLITHLEEKPRDVVNACYNCFHFNVKNLALMIMNTTPDNGRAKLLNIPRVQV---NWNRLLAP 701
Fly 702 HLWRQNEAPLETSEIKSEIITLEFSKRELIIAKRLV-PLISSFSGQDLCDLAHIVANVNVNSD-- 763
Fly 764 ----------VIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNIRNVVLSTSKNADN 818
Fly 819 KW---LEMQCQFPLE-EVHSEQEKIP----GTVVCLWLEPFRITTDIYLLQFLNFS--------- 866
Fly 867 ---DN-------SGRQITKDKEVETDLESVNQ----------SEP---PITQSVSN-YSTISASA 907
Fly 908 IA---------FNDFQPRRISRNNSRKISVPEETVHLSSERDER--------------HTQAEPL 949
Fly 950 TIPVANKP---QPSNFDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRKTPGHTDVEYTSIRLPHM 1011
Fly 1012 KVKSG-------------------------------------NCEAIQRGNIRGVIPVASNTELL 1039
Fly 1040 NWVFDL-NEFNVCYRRANV--TEMIIAPVRTTITLALS-------------FKTSDKVDGSKGKE 1088
Fly 1089 ------DKCANTCSINVHVDMSAINIFAQRVKLLHEHCLIISKMYGSLCPDEPASKWQTGKMKPR 1147
Fly 1148 L-EVYTGSAQ--NYPVIKE---------------------------FLELDPNFEAPKVKSAPKS 1182
Fly 1183 SVILFCQWTIPRISFE---MENSNDFKHSKIVMSLEDL---------------------LLNIDK 1223
Fly 1224 HSDFNKITT-------KIE------------NFGL-----NYYE-----------------EKHE 1247
Fly 1248 EWEKIDDL----------HIKMLGDSTNLPL-------------------ISVVITTVSLEDLYA 1283
Fly 1284 KI-----------------GARNP--------------------HNKQHTISEVLIEVQPIEMVL 1311
Fly 1312 NLDQITEFMVPIC-----EVLEIIGNSASAQ---SANKPSAPVPSKITTVQDLPMVHLNSKGIYV 1368
Fly 1369 -YLPLSTGKKSCS------------VLLLRIE-----------SIQLTPSLENPLVRQ------L 1403
Fly 1404 VR---PDIYQKAAELNM---LSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASKHDN 1462
Fly 1463 PAFEWNNQSQSTELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCATDFVA---------- 1517
Fly 1518 -SLNTHQISL----ISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNISKYNSVDNSIYFPA 1577
Fly 1578 DPKVFKKDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSDY-FYGSCQSDSGIHLGTRMKGYSRS 1641
Fly 1642 LAAEEINRSGRQPFVLSYPSSVSFVAGIFVLKIYDVLELEELERPVMKPLFL---MTVSQPSFMS 1703
Fly 1704 TQNFKAAVTQASIFNVNISVAKADVD--GKVDSERFNESVFATLPGQLGSSGIPPPLLTIKTQYD 1766
Fly 1767 RLHQKEVDVELRKPIL-------LRICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQL 1824
Fly 1825 RQLKMNCYNA-DRFHLSCDRITAKFYDEERSYKCSFVWLDVSTRIKF----------SSRPQKAV 1878
Fly 1879 -IRSNIGSFYVQSGEKMLLHPLLMRLSVD-----LVSEP---------WSEELLVNATLKLNYLH 1928
Fly 1929 IDAGVFSIL-----QLQKAQQGVNRIREYA----DREWQQFLRSRP----------------VLG 1968
Fly 1969 ---TPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVY----------LNSES 2020
Fly 2021 ------VLPMPYQVQIIKKNYG--------IICWRYPQPRQMT-SIHIYPVPMP----------- 2059
Fly 2060 ---VSRPIHIRCRMEYFSETHETFLHYC------------------------------------- 2084
Fly 2085 DFM--LSETSTKQLTPPD-------------RPICATIWRVVILQSLISVDGTCFEGSEDEDLSI 2134
Fly 2135 EYLQSDFKV------------------DENNDFILHP-----KVLVGCMRIDTVFRAEKVPKLQL 2176
Fly 2177 LLCCQDIELNFVNQ--------TDNTGELPKQLNKYRLRQTPNITQTFLTVHVEDLQMHSRIYSR 2233
Fly 2234 NDFSL--------QTEMRARVK--CLDYGFLNMLDVLEPMKFSSY------VRLTDYPRSLVQAN 2282
Fly 2283 FLVDKLRLNCGPHVIHTLLSSKYHWQEVLQQKDVRHVLMPKLVIVNRIQT-PISFGQTNTVEKIP 2346
Fly 2347 VNPGEVQLYHFR-SCSHVQELTFFITNPKTLLVDSSDSVHIALKFEDEEKIHNLRVGEYCITLKL 2410
Fly 2411 AKLSTTQIYILVKGQIELVSMVPFNLVTEFREEEINYDESTPPEHLLLSKERSSYYQNVKRNADI 2475
Fly 2476 NMRLKLTAGLGRGRTGDIPLKTNNNLPWL----------VKVPTQSAQQFISIWVRILR------ 2524
Fly 2525 -ED---------IKMDKPAEDFQPQKIL------ICIWPIFEICN-MLSCAVK------------ 2560
Fly 2561 ------------ATESTTGE------------SSTIEAMGGRWALNTATTHATEHNIGFTFSGIL 2601
Fly 2602 RGSSKDEYS---LMLRTMDWHKFFYYDPTVWTIENALHKLGKSSKRKWPLNDPEELRVSRVLDFE 2663
Fly 2664 NAFDVKYQTKATREFSCCQGLDVTAWGMFING-TGLYVAIFMIQEQARLDLKANSLQMM------ 2721
Fly 2722 PK-LKSAF-TIDVRFDNGWKSSTPICLEDFTQKSSSNAGRSLYLRYN-----SFVDIVIVERDEV 2779
Fly 2780 LRLILEYR-QEDDGRRLFKLRSKFVFTNFTDVVLNALTLAMDHKENSTREEVEAYSI-----CKK 2838
Fly 2839 -----ARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYFVCFSVGGSR----------- 2887
Fly 2888 ---------------EISIP------IPLAVPFT--------------------RRCFSLQAGPE 2911
Fly 2912 SIPLMITL-------IEKDNVHYLNVFRDTAPAIVISNNTNVK---FIVAQTSASENSNVSCTNS 2966
Fly 2967 EFVGRNFEWNQLVLPH--SNCYYTPPQMYANFPDVEFTMCNLSLAVYKDKLCAKNKIAWSKPI-R 3028
Fly 3029 TDKSWQKFLHVPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFSVKD---LRSRLTKPEN------V 3084
Fly 3085 LMPSQEQA----------APRPDES----------------------------------SEQEND 3105
Fly 3106 TKRVTLP------NMVTCAHFNEECESKTQTRIKIFIKSFVFSLQTDNRENDFVKTEV------- 3157
Fly 3158 -CNIYADDSMLI---YDDDDDQRELRLQLPNLQVDNQLYSSGKYDFPVLLCAEKLYRRNCSLPQV 3218
Fly 3219 YDLDHVYKQQAQRTPVSLFTFIFYQDEMQLQNVRCQ---IPP---FRVYIEDAYLNQLLEALVE- 3276
Fly 3277 CEPSNCV---------YSPPVEQDQILLPAGMTLL------------------PDQVVAQSLYIS 3314
Fly 3315 EPLRLNSFTVEPLNLLLSVHTSSRLYIAL--------DHSP--------------------LSFS 3351
Fly 3352 RYE-RQQ--------------ILTVPLRFGQSLG--LHYLSGAIFGAG----------------- 3382
Fly 3383 -----------WVV------GSLEILGSPSGLARS----FSTGLRDF------VSMPVQGLFR-- 3418
Fly 3419 ---GPWGFL---VGVTQGSA--------------------SLLRNVT-------------AGTVN 3444
Fly 3445 SVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGFADGLTQGLTGLGISLLGAVGGLAHHTLE 3509
Fly 3510 ARSSVGV---IAGLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAMPQQVEPSFIRNVALHG 3571
Fly 3572 SSNRIWSYLPEELSRDQML-------FFSEIMLQISTQ---LRPALLFLTSSVLAIMQSDSEDLA 3626
Fly 3627 FASPISKVDVLADR-----EDPSKLYLSLKSERRDDFEGQLNYTNERIMKFLNASRLQSIANDSL 3686
Fly 3687 -NDL--LQLHELDVDDRIQRQSQCIFYIK 3712 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 33/111 (30%) |
VPS13_C | 3319..3468 | CDD:293514 | 42/278 (15%) | ||
ATG_C | 3473..3546 | CDD:286423 | 23/75 (31%) | ||
AT1G48090 | NP_001320409.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |