Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001331612.1 | Gene: | AT5G24740 / 832543 | AraportID: | AT5G24740 | Length: | 3521 | Species: | Arabidopsis thaliana |
Alignment Length: | 4361 | Identity: | 791/4361 - (18%) |
---|---|---|---|
Similarity: | 1364/4361 - (31%) | Gaps: | 1706/4361 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYI---TPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIH 65
Fly 66 ELSILVPWTKLMSEPVKIVINTIEFVAKLPDSESKQRRASFQREQRRKS----KRESVEQPDQTK 126
Fly 127 SPGPASSSSVVNKIINNINLQCHNIILKYVEDDIVVSMNVQTLNFSSAGEDWKPTMVDIHPVSVV 191
Fly 192 MRKLLQVSDLTICLDKRN----TAGRIEVCQEPVLYR---CTLECRVLRKYNANTVSTTSTTRIG 249
Fly 250 VFTKSLDINVSSLQFPMVMRLVKM---LLELKPAEFEDD-PQ---NPEDQEAVAEGSESQ----- 302
Fly 303 ---------QGTESAGR---------------SVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLG 343
Fly 344 VYAEELNFQLKNSEYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKECDWANVKAGLSSM--- 405
Fly 406 -CMEPLGAYR-----------SDDLVDRNLVNTQEFQQERSFIDKSLFDENYMFAERSWCSYNYA 458
Fly 459 DYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRDLGVRIQYRLLSAGITFHFSQSFV 523
Fly 524 QVKKVISDLIRPYDYPGYRSESMKDEDRGV------PEPENKNSEMTIPDLEYLMGLVPTCNYKI 582
Fly 583 ELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSLLPYLQLKISLVEGTMCGPVNPVRLVQLITHL 647
Fly 648 EEKPRDVVNACYNCFHFNVKNLALMIMNTT------PDNGRAKLLNIPRVQVNWNRLLAPHLWRQ 706
Fly 707 NEAPLETSEIKSEIITLEFSKRE---LIIAKRLVPLISSFSGQDLCDLAHIVANVNVNSDVIKLQ 768
Fly 769 SVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNIRNVVLSTSKNADNKW----LEMQCQFPL 829
Fly 830 EEVHSEQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGRQITKDKEVETDLESVNQSEPPIT 894
Fly 895 QSVSNYS-------------TISASAIAFNDFQPRRISRNNSRKIS-----VPEETVHLSSERDE 941
Fly 942 RHTQAEPLTIPVANKPQPSNFDTTDFVKRLTKMVV-LVEIAQAKIDVCEVMMRKTPG-------- 997
Fly 998 --HTDVEYTSIRLPHMKVKSGNCEAIQRGNIRGVIPVASNTELLNWVFDLNEFNVCYRRANVTEM 1060
Fly 1061 IIAPVRTTITLALSFKTSDK------------------VDGSKGKEDKCAN-------TCSINVH 1100
Fly 1101 VDMSAINIFAQRVKLLHEHCLIISKMYGSLCPDEPASKWQTGKMKPRLEVYTGSAQNYP----VI 1161
Fly 1162 KEFLELDPNFEAPKVKSAPKS-SVILFCQWTIPRISFEMENSNDFKHSKIVMSLEDLLLNIDKHS 1225
Fly 1226 DFNKITTKIENFGLNYYEEKH-----EEWEKIDDLHIKMLGDSTNL---------------PLIS 1270
Fly 1271 VVITTVSLEDLYAKIGARNP--------------HNKQHTISEVLIEVQPIEMVLNLDQITEFMV 1321
Fly 1322 PICEVLEIIGNSASAQSANKPSAPVPSKITTVQDLPMV---HLNSKGIYVYLPLSTGKKSCSVLL 1383
Fly 1384 LRIESIQLTPSLENPLVRQLVRPDIYQKAAELNM---LSTPGALVEDRQYELSVRRVSLSTGNWK 1445
Fly 1446 QTQEYRIEKTLASKHDNPAFEWNNQS------QSTELD--HMEIFKDFDFIMIYAPAISY----- 1497
Fly 1498 DRFLVCGQSVEYNCATDFVASLNTHQISLI--------------SCIIVRAQRLG---CIIDQVC 1545
Fly 1546 VKNAELPKARSHKTLGNISKYNSVDNSIYFPADPKVFKKDTWI-------PKSSKKLVSERLSYT 1603
Fly 1604 NASTSFTDAKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSFVAG 1668
Fly 1669 IFVLKIYDVLELEELERPVMKPLFLMTVSQPSFMSTQNFKAAVTQASIFNVNISVAKADVDGKVD 1733
Fly 1734 SERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLH--QKEVDVELRKPILLR----ICENTIKQ 1792
Fly 1793 ---LASDV--FRI--YTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNADRFHLSCDRITAKFYD 1850
Fly 1851 E-ERSYKCSF------VW-------------------LDVSTRIKFSSRPQKAVIRSNIG--SFY 1887
Fly 1888 VQSGEKML--LHPLLMRLSVDLVS-EPWSEELLVNATLKLNYLHIDAGVFSILQLQKAQQGVNRI 1949
Fly 1950 REYADREWQQFLRSRPVLGTPKDVSPCNLIKCTPSHES--IERIKRPLKSNAEFYQ--------- 2003
Fly 2004 -DDLRA----GAFQFVYLNSESVLPMPYQVQIIKKNYGIICWRYPQPRQMTSIHIYPVPMPVSRP 2063
Fly 2064 IHIRCRMEYFSETHETFLHYCDFMLSETSTKQLTPPDRPICATIWRVVILQSLISVDGT--CFEG 2126
Fly 2127 SEDEDLSIEYLQSDFKVDENNDFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIELNFVNQT 2191
Fly 2192 DNTGE-----------LPKQLNKYRLRQTPNITQTFLTVHVEDLQMHSRIYSRNDFSLQ-TEMRA 2244
Fly 2245 RVKCLDYGFLNMLDVLEPMKFSSYVRLTD-YPRSLVQANFLVDKLRL-NCGPHVIHTLLSSKYHW 2307
Fly 2308 QEVLQ--QKDVRHVLMPKLVIVNRIQTPISFGQTNTVEKIPVNPGEVQLYHFRSCSHVQELTFFI 2370
Fly 2371 TNPKTLLV-------------DSSDSVHIALKFEDEEKIHNLRVGEYCITLKLAKLSTTQIYILV 2422
Fly 2423 KGQIELVSMVPFNLVTEFREEEINYDESTPPEHLLLSKER--SSYYQ---NVKRNADINMRLKLT 2482
Fly 2483 AGLGRGRTGDIPLKTNNNLPWLVKVPTQSAQQFISIW--VRILRE-----DIKMDKPAEDFQPQK 2540
Fly 2541 ILICIWPIFEICNMLSCAVKATESTTGESSTIEAMGGRWALNTATTHATEHNIGFTFSGILRGSS 2605
Fly 2606 KDEYSLMLRTMDWHKFFYYDPTVWTIENALHKLGKSSKRKW-PLND----PEELRVSRVLDFENA 2665
Fly 2666 FDVK-----YQTKATRE-FSCCQGLDVTAWGMFINGTGLYVAIFMIQEQARLDLKANS----LQM 2720
Fly 2721 MPKLKSAFTIDVRFDNGWKSSTPI----CLED----------FTQKSSSNAGRSLYLRYNSFVDI 2771
Fly 2772 VIVERDEVLRLILEYRQEDDGRR----------LFKLRSKFVFTNFTDVVLNALTLAMDHK---- 2822
Fly 2823 -------------------------------------ENSTREEVEAYSICKKARSLVS------ 2844
Fly 2845 -------------------------SESTKNCSGNAMDV--FYDLNAHK-------AKHNCDTAF 2875
Fly 2876 VYFVCFSVGGSREISIPIPLAVPFTRRCFSLQAGPES----------IPL------MITLIEKDN 2924
Fly 2925 VHYLN------VFRDTAPAIVISNNTNVKFIVAQTSASENSNVSCTNSEFVGRNFEWNQLVLPHS 2983
Fly 2984 NCYYTPPQMYANFPDVEFTMCNLSLAVYKDK---------LCAKNKIAWSKPIR--------TDK 3031
Fly 3032 SWQ---KFLHVPHH------------------------------GDVKVV--------------- 3048
Fly 3049 ---------VCDKHRAIRLNIYYIAQQLE------------------------------------ 3068
Fly 3069 ---FSVK------DLRSRLTKPENVLMPS-QEQAAPR----PDESSEQENDTKRVTLPNMVTCAH 3119
Fly 3120 FNEECESKTQT-RIKIFIKSFVFSLQT------DNRENDFVKTEVCNIYADDSMLIYDDDDDQRE 3177
Fly 3178 LRLQLPNLQVDNQLYSSGKYDFPVLL-------------------------CAEKLYRRNCSLPQ 3217
Fly 3218 VYDLDHVYKQQAQRTPVSLFTFIFYQDEMQLQNVRCQIPPFRVYIEDAYLNQLLEALVECEPSN- 3281
Fly 3282 -------------CVYS-----------------PPVEQDQ-------ILLPAGMTLLPDQVVA- 3308
Fly 3309 --QSLYISEPLRLNSFTVEPLNLLLS-------------------VH---------TSSRLY--- 3340
Fly 3341 IALDHSPLSFSRYER-------QQIL--TVPLRFGQSLGLH--------------YLSGAIFGA- 3381
Fly 3382 -GWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRGPWGFLVGVTQGSASLLRNVTAGTVNS 3445
Fly 3446 VTKLAGSVARNLDRLTL---DAEHIELTEARRRARPQGFADGLTQGLTGLGISLLGAVGGLAHHT 3507
Fly 3508 LEARSSVGVIAGLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAMPQQVEPSFIRNVALHGS 3572
Fly 3573 SNRIWSYLPEELSRDQML--------FFSEIMLQISTQLR---------------PALLFLTSSV 3614
Fly 3615 LAIMQS 3620 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 39/118 (33%) |
VPS13_C | 3319..3468 | CDD:293514 | 38/207 (18%) | ||
ATG_C | 3473..3546 | CDD:286423 | 22/72 (31%) | ||
AT5G24740 | NP_001331612.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 49 | 1.000 | Domainoid score | I4477 |
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.000 |