Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021327607.1 | Gene: | vps13c / 798746 | ZFINID: | ZDB-GENE-070426-4 | Length: | 3755 | Species: | Danio rerio |
Alignment Length: | 4461 | Identity: | 798/4461 - (17%) |
---|---|---|---|
Similarity: | 1443/4461 - (32%) | Gaps: | 1513/4461 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELSI 69
Fly 70 LVPWTKLMSEPV----------------------------------------------------- 81
Fly 82 -KIVINTIEFVAKLPDSESKQRRASFQREQRRKSKR--ESVEQPDQTKSPGPASSSSVVNKIINN 143
Fly 144 INLQCHNIILKYVEDDI-------VVSMNVQTLNFSSAGEDWKPTMVDIHPVSVVMRKLLQVSDL 201
Fly 202 TICLDKRNTAGRIE-VC-----QEPVLYRCTLECRVLRKYNANTVSTTSTTRIGVFTKSLDINVS 260
Fly 261 SLQFPMVMRLVKMLLELKPAEFE-DDPQ---NPEDQEAVAEGSESQQGTESAGRSVFWWAWSLLP 321
Fly 322 SFDTEAPSSSCDTPTG--HAF--DLGVYAEELNFQLKNSEYFTDQSMGGIKRIRYTPILRISLGG 382
Fly 383 LYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDRNLVNTQEFQQERSFIDKSLFDENYMF 447
Fly 448 AERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRDLGVRIQYRLLSA 512
Fly 513 GITFHFSQSFVQVKKVISDLIRPYDYPGYRSESMKDEDRGVPEPENKNSEMTIPDLEYLMGLVPT 577
Fly 578 CNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSLLPYLQLKISLVEGTMCGPVNPVRLVQ 642
Fly 643 LITHLEEKP-RDVVNACYNCFHFNVKNLALM-----IMNTTPDNGRAKLLNIPRVQVNWNRLLAP 701
Fly 702 HLWRQNEAPLETSEIKSEIITL-EFSKR------ELIIAKRLVPLISSFSGQDLCDLAHIV---- 755
Fly 756 ---ANVNVNSDVIKLQSVG---------------TKLNLVYHKYHTHL-AAVGSLQGVHTDAVHT 801
Fly 802 -KMNIRNVVLSTSKNADNKWLEMQCQFPLEEVH----------------SEQEKIPGTVVCLWLE 849
Fly 850 PFRITTDIYLLQFLNFSDN-------------------------SGRQI-------TKDK----- 877
Fly 878 -----------------EVETDLESVNQSEPPITQ------------SVSNYSTISASAIAFNDF 913
Fly 914 QPRRISRNNSRKISVPEETVHLSSER-DERHTQAEPLTIPVANKPQPSNFDTTDFVK-------- 969
Fly 970 ----RLTKMVVLVEIAQAKIDVCEVMMRKTPGHTDVEYTSIRLPHMKVKSGNCEAIQRGNI---- 1026
Fly 1027 RGVIPVASNTELLNWVFD--LNEFN--VCYRRANVTEM-----------------IIAPVRTTIT 1070
Fly 1071 LALSFKTSDKVDGS-KGKE---------------DKCANTCSINVHVDMSAINIFAQRVKLLHEH 1119
Fly 1120 CLIISKMYGSLCP--DEP-ASKWQTGKMKPRLEVYTGSAQNYPV--IKEF------LELDPNFEA 1173
Fly 1174 PKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSKIVMSLEDLLLNIDKHSDFNKITTKIENFG 1238
Fly 1239 LNYYEEKHEEWEKIDDLHIKMLGDSTNLPLISVVITTVSLEDLYAKIGARNPHNKQHTISEVL-- 1301
Fly 1302 ---------------------IEVQPIEMVLNLDQITEFMVPICEVL-EII--GNSASAQSANKP 1342
Fly 1343 SAPVPSKIT--TVQDLPM-------------------VHLNSKGIYVYLPLSTGKKSCSVLLLRI 1386
Fly 1387 ESIQLTPSLENPLVRQLVRPDIYQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYR 1451
Fly 1452 IEKTLASKHDNPAFEWNNQSQSTELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCATDFV 1516
Fly 1517 -ASLNTHQISLISCIIVRAQRLGCIIDQVCVKNAELPK-ARSHKTLGNISKYNSVDNSIYFPADP 1579
Fly 1580 KVFKKDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSDYFYGSCQ-SDSGIHLGTRMKGY----- 1638
Fly 1639 -SRSLAAEEINRSGRQPFVLSYPSSVSFVAGIFVLKIYDVLELEELERPVMKPLFLMTVSQPSFM 1702
Fly 1703 STQNFKAAVTQASIFNVNISVAKADVDGKVDSERFNESVFATLPGQLGSSGIPPPLLTIKTQYDR 1767
Fly 1768 LHQKEVDVELRKPILLRICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPE-----GSQLRQL 1827
Fly 1828 KMNCYNADRFHLSCDRITAKFYDEERSYKCSFVWLDVSTRIKFSSRPQKAVIRSNIGSFYVQSGE 1892
Fly 1893 KMLLHPLLMRLSV--DLVSEPWSEELL---VNATLKLNYLHIDAGVFSILQLQKAQQGVNRIREY 1952
Fly 1953 ADREWQQFLRSRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLN 2017
Fly 2018 SESVLPMPYQVQIIKKNYGIICWRYPQPRQMTSIHIY---PVPMPVSRPIHIRCRMEYFSETHET 2079
Fly 2080 FLHYCDFML--SETSTKQLTPPDRPICATIWRVVIL---QSLISVDGTCFEGSEDEDLS-----I 2134
Fly 2135 EYLQSDFKVDENNDFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIEL------NFV----- 2188
Fly 2189 ---NQTDNTGELP-KQLNKYRLRQTPNIT--------QTFLTVHVEDLQMHSRIYSRN------- 2234
Fly 2235 --------DFSLQTE-----MRARVKCLDY---------GFLNMLDVLEPMKFSSYVRL-TDYPR 2276
Fly 2277 SL-VQANFLVDKLRLNCGPHVIHTLLS-----SKYHWQEVLQQKDVRHVLMPKLVIVNRIQTPIS 2335
Fly 2336 FGQTNTVEKIPVNPGEVQLYHFRSCSHVQELTFFITNPKTLLVDSS-DSVHIALKFEDEEKIHNL 2399
Fly 2400 RVGEYCITLKLAKLSTTQIYILVKGQIELVSMVPFNLVTEFREEEINYDESTPP--EHLLLSKER 2462
Fly 2463 SSYYQNVKRNADINMRLKLTAGLGRGRTGDIPLKTNNNLPWLVKVPTQSAQQFISIWVRILREDI 2527
Fly 2528 KMDKPAEDF----QPQ-KILICIWPIFEI-----C-NMLSCAVKA-TESTTGESSTIEAMGGRWA 2580
Fly 2581 LNTATTHATEHNIGFTFSGILRGSSKDEYSLMLRTMDWHKFFYYDPTVWTIENALHKLGKSSKRK 2645
Fly 2646 WPLNDPEELRVSRVLDFE-NAFD-VKYQTKATREFSCCQGLDVTAWG--------MFINGTGLYV 2700
Fly 2701 AIFMIQEQA---RLDLKANSLQMMPKLKSAFTIDVRFDNGWKSSTPICLEDFTQKSSSNAGRSLY 2762
Fly 2763 LRYNSFVDIVIVERDEVLRLILE-YRQE------DDGRRLFK---------------------LR 2799
Fly 2800 SKFVFTNFTDVVLNALTLAMDHKENSTREEVE-------------------AYSICKKARSLVSS 2845
Fly 2846 ES--------------TKNCSGNAMDVFYDLNAHKAKH-------------------NCDT--AF 2875
Fly 2876 VYFVCF---SVGGSREISIPIPL-AVPFTRRCFSLQAGPESIPLMITLIEKDNVHYLNVFRDTAP 2936
Fly 2937 AIVIS-------NNTNVKFIVAQTSASENSN---------VSCTNSE---FVGRNFEWNQLVLPH 2982
Fly 2983 ---SNCYYTPPQMYANFPDVEFTMCNLSLAVYKDKLCAKNKIAW-------SKPIRTDKSWQK-- 3035
Fly 3036 ----------------------FLHVPHHGD--VKVVVCDKHRAIRLNIYY-------IAQQLEF 3069
Fly 3070 SVKDLRSRLTKPENVLMPSQEQ-------AAPR------PDESSEQE------------------ 3103
Fly 3104 -----NDTKRVTL----PNMVTCAHFNEECESKTQTRIKIFIKSFVFSLQTDNRENDFVKTEVCN 3159
Fly 3160 IYADDSMLIYD------------------------------------------------------ 3170
Fly 3171 ------------------DDDDQRELRLQLPNLQVDNQLYSSGKYDFPVLLCAEKLYRRNCSLPQ 3217
Fly 3218 VYDLDHVYKQQAQRTP---VSLFT-FIFYQDEMQLQNVRCQIPPFRVYIEDAYLNQLLEALVECE 3278
Fly 3279 PSNCVYSPPVE-----QDQILLPAGMTLLPDQVVAQSLYISEPLR-LNSFTVEPLNLLLSVHTSS 3337
Fly 3338 R-------------------------------LYIALDHSPLSFSRYERQQILTVPLRFGQSLGL 3371
Fly 3372 HYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRGPWGFLVGVTQGSASLLR 3436
Fly 3437 NVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRA---RP-QGFADGLTQGLTGLGISLL 3497
Fly 3498 GAVGGLAHHTLEA---RSSVGVIAGLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAMPQQV 3559
Fly 3560 EPSFIRNVALHGSSNRIWSYLPEELSRDQMLFFSEIMLQISTQLRPALLFLTSSVLAIMQ---SD 3621
Fly 3622 SEDLAFASPISKVDVLADREDPSKLYLSLKSERRDDFEGQLNYTNERIMKFLNASRLQSIANDSL 3686
Fly 3687 NDLLQLHELDVDDRIQRQSQCIF--YIKPNI---GEHLIHY 3722 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 33/167 (20%) |
VPS13_C | 3319..3468 | CDD:293514 | 44/179 (25%) | ||
ATG_C | 3473..3546 | CDD:286423 | 23/79 (29%) | ||
vps13c | XP_021327607.1 | Chorein_N | 4..113 | CDD:315323 | 23/109 (21%) |
VPS13 | 186..414 | CDD:318996 | 55/308 (18%) | ||
VPS13_mid_rpt | 614..838 | CDD:318998 | 42/236 (18%) | ||
VPS13 | <1245..>2613 | CDD:330393 | 331/1811 (18%) | ||
SHR-BD | 2766..3018 | CDD:310922 | 45/277 (16%) | ||
VPS13 | <3186..3635 | CDD:330393 | 119/525 (23%) | ||
VPS13_C | 3323..3498 | CDD:318997 | 44/185 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |