Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_796125.2 | Gene: | Vps13b / 666173 | MGIID: | 1916380 | Length: | 3993 | Species: | Mus musculus |
Alignment Length: | 4299 | Identity: | 990/4299 - (23%) |
---|---|---|---|
Similarity: | 1738/4299 - (40%) | Gaps: | 1013/4299 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIEFVAKLPD----------SESKQRRASFQREQRRKSKRESVEQPD 123
Fly 124 QTKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIVVSMNVQTLNFSSAGEDWKPTMVDIHPV 188
Fly 189 SVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTSTTRIGVFTK 253
Fly 254 SLDINVSSLQFPMVMRLVKMLLEL--------KPAEFEDDPQNPEDQEAVAEGSESQQGTES--- 307
Fly 308 ---AGRSVF---------W--WAWSLLP---SFD--------TEAPS----SSCDTPTGHAFDLG 343
Fly 344 VYAEELNFQLKNSEYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKE----CDWANVKAGLSS 404
Fly 405 MCMEP-LGAYRSDDLVDRNLVNTQEF-------QQERSFIDKSLFDENYMFAERSWCSYNY---- 457
Fly 458 ADYVARNTDEYMLFRSPVLAFD---VIEHRVPK-PSSH---PVAESQLRDLGVRIQYR----LLS 511
Fly 512 AGITFHFSQSFVQ--VKKVISDLIRPYD-YPGYRSESMKDEDRGVPEPENKNS-EMTIPDLEYLM 572
Fly 573 GLVP-TCNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSL--LPYLQLKISLVEGTMCGP 634
Fly 635 VNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKNLALMIMNTTPDNGRAKLLNIPRV----QVNW 695
Fly 696 NRLL-APHLWRQNEAPLETSEI-KSEIITLEFSKRELIIAKRLVPLISSFSGQDLCDLAHI--VA 756
Fly 757 NVNVN----SDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKM---------NIRNV 808
Fly 809 VLSTSKNADNKWLEMQCQFPLE--EVHS----EQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSD 867
Fly 868 NSGRQ-ITKDKEVETDLESV----------------NQSEP----PITQSVS------------- 898
Fly 899 --NYSTISASAIAFNDFQPRRISRNNSRKISVPEETV-----HLSSERDERH-------TQAEPL 949
Fly 950 T-----------IPVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRKTPGHTDVEY 1003
Fly 1004 TSIR-LPHMKVKSGN---CEAIQRGNIRGVI--PVASNTELLNWVFDLNEFNV-CYRRANVTEMI 1061
Fly 1062 IAPVRTTITLALSFKTSDKV--DGSKGKEDKCANTCSINVHVDMSAINIFAQ--RVKLLHEHCLI 1122
Fly 1123 ISKMY------GSLCPDE----------PASK-WQT-GKMKPRLEVYTGSAQNYPVIKEFLELDP 1169
Fly 1170 NFEAPKVKSAPKS--------------------SVILFCQWTIPRISFEMENSN-DFKHSKIVM- 1212
Fly 1213 -SLEDLLLNIDKHSDFNKITTKIENFGLNYYEEK-HEEWEK--IDDLHI----------KML-GD 1262
Fly 1263 STNLPLISVVITTVSLEDLYAKIGARNPHNKQHTISEVLIEVQP---IEMVLNLDQITEFMVPIC 1324
Fly 1325 -EVLEIIGN-------SASAQSANKPSAPVPSKITTVQDLPMVHLNSKGIYVYLPLSTGKKSC-- 1379
Fly 1380 -------SVLLLRIESIQLTPSLENPLVRQLVRPDIYQKAAELNMLSTPGALVEDRQYELSVRRV 1437
Fly 1438 SLSTGNWKQTQEYRIEKTLAS---------KHDNPAFEWNNQSQSTELDHME-------IFKDFD 1486
Fly 1487 FIMIYAPAISY-----------DRFLVCGQSVEYNCATDFVASLNTHQISLISCIIVRAQRLGCI 1540
Fly 1541 IDQVCVKNAELPKARSHK-------TLGNISKYNSVDNSIYFPADPKVFKKDTWIPKSSKKLVSE 1598
Fly 1599 RLSYTNASTSFTDAKGSS-------------DYFYGSCQSDSGIHLGTRMKGYSRSLA------- 1643
Fly 1644 -AEEINRSGRQPFVLS----------------------YPSSVSFVAGIFVLKIYDVLELEELER 1685
Fly 1686 P-------------VMKP-----------LFL-MTVSQPSFMSTQNFKAAVTQASIFNVNISVAK 1725
Fly 1726 ADV----DGKV--DSERFNESVFATLPGQLGS-SGIPPPLLTIKTQYDRLHQK-------EVDVE 1776
Fly 1777 LRKPILLRICENTIKQL---ASDVFRIYTVLH----ETP---CFNVRSPRPVPEGSQLRQLKMNC 1831
Fly 1832 YNA--DRFHLSCDRITAKFYDEE--RSYKCSFVWLDV-STRIKFS----SRPQKAVIRSNI---- 1883
Fly 1884 GSFYVQSGEK-----------MLLHPLLMRLSVD----LVSEPWSEELLVNATLKLN-------- 1925
Fly 1926 -----------YLHIDAGVFSILQLQKAQQGVNRIREYADREWQQFLRSRPVLGTPKDVSPCNLI 1979
Fly 1980 KCTPSHESIERIKRPLKSNAEF----YQDDLRAGAFQFVYLNSESV-LPMPYQVQI---IKKNYG 2036
Fly 2037 IICWRYPQPRQMTSIHIYPVPMPVSRP-----------IHIRCRMEYFSETHETFLHYCDFMLSE 2090
Fly 2091 TSTKQLTPPD--------RPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEYLQSDFKVDENN 2147
Fly 2148 DFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIELNFVNQTDNTGEL-PKQLNKYRLRQTPN 2211
Fly 2212 ITQTFLTVHVEDLQMHSRIYSRNDFSLQTEMRARVKC--LDYGFLNMLDVLEPMKFSSYVRL-TD 2273
Fly 2274 YPRSLVQANFLVDKLRLNCGPHVIHTLLSSKYHWQEVLQQK--DVRHVLMPKLVIVNRIQTPISF 2336
Fly 2337 GQTNTVEKIPVNPGEVQLYHFRSCSHVQELTFFI--------TNPKTLLVDSSDSVHIALKFEDE 2393
Fly 2394 EKIHNLRVGEYCITLKLAKLSTTQIYILVKGQIELVSMVPFNLVTEFREEEINYD-ESTPPEHL- 2456
Fly 2457 -LLSKERSSYYQNVKRNADINMRLKLTAGLGRGRTGDIPLKTNNNLPW---------------LV 2505
Fly 2506 KVPTQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIFEICNMLSCAVKATESTTGESS 2570
Fly 2571 TIEAMGGRWALNTATTHATEHNIGFTFSGILRGSSKDEYSLMLRTMD----WHKFFY----YDPT 2627
Fly 2628 --VWTIENALHKL---------------------GKSSKRKWPLNDPEELRVSRVLDFENAFDVK 2669
Fly 2670 YQTKATREFSCCQGLDVTAWGMFINGTGLYVAIFMIQEQARLDLKANSLQMMPKLKSAFTIDVRF 2734
Fly 2735 DNG---WKSSTPICLEDFTQ---KSSSNAGRSLYLRYNSFVDIVIVERDEVLRL--------ILE 2785
Fly 2786 Y---RQEDDGRRLFKLRSKFVFTNFT--DVVLN---ALTLAMDHKENSTREEVEAYSICKKARSL 2842
Fly 2843 VSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYFVCFSVGGSREISI---PIPLAVPFTRRCF 2904
Fly 2905 SLQA--GPE------SIP-------------LMITLIEKDNVHYLNVFRDTAPAIVISNNTNVKF 2948
Fly 2949 IVAQTSAS-ENSNVSCTNSEFVGRNFEWNQLVLPHSNCYYTPPQMYANFPDVEFTMCNLSLAVYK 3012
Fly 3013 DKLCAKNKIAWSKPIRTDKSWQKFLHVPHHGDVKVVVCDK---------------------HRAI 3056
Fly 3057 RLNIYY--IAQQLEFSVKDLRSRLTKPENVLMPSQEQAAPRPDESSEQENDTKRVTLPNMVTCAH 3119
Fly 3120 FNEECESKTQTRIKIFIKSFVFSLQTDNRENDFVKTEVCNIYADDSMLIYDDDDDQRELRLQLPN 3184
Fly 3185 LQVDNQLYSSGKYDFPVLLC---------------------AEKLYRRNCSLPQVYDLDHVYKQQ 3228
Fly 3229 AQRTPVSLFTFIFYQDEMQLQNVRCQIPPFRVYIEDA---YLNQLLEALVECEPSNCVYSPP--V 3288
Fly 3289 EQDQILLPAGMTLLPDQVVAQSLYISEPLRLNSFTVEPLNLLLSVHTSSRLYIALDHSPLSFSRY 3353
Fly 3354 ERQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFR 3418
Fly 3419 GPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGFAD 3483
Fly 3484 GLTQGLTGLGISLLGAVGGLA-------HHTLEARSSV-----GVIAGLTKGIVGALTKPISGAA 3536
Fly 3537 EMLALTGQGVLHTVGFNAMP-QQVEPSFI-RNVALHGSSNRIWSYLPEELSRDQM-LFFSEIMLQ 3598
Fly 3599 ISTQLRPALLFLTSSVLAI--MQSDSEDLAFASPISKVDVLADREDPSKLYLSLKSER-RDDFEG 3660
Fly 3661 QLNYTNERI 3669 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 60/121 (50%) |
VPS13_C | 3319..3468 | CDD:293514 | 74/148 (50%) | ||
ATG_C | 3473..3546 | CDD:286423 | 38/84 (45%) | ||
Vps13b | NP_796125.2 | Chorein_N | 3..102 | CDD:315323 | 56/98 (57%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 100..133 | 6/32 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1262..1303 | 9/50 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1616..1637 | 4/23 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1735..1770 | 8/48 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2048..2067 | 4/18 (22%) | |||
SHR-BD | <2605..>2685 | CDD:310922 | 20/90 (22%) | ||
VPS13_C | 3557..3703 | CDD:318997 | 72/145 (50%) | ||
ATG_C | 3705..3809 | CDD:312735 | 44/103 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 386 | 1.000 | Domainoid score | I801 |
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 761 | 1.000 | Inparanoid score | I546 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46865 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0008361 | |
OrthoInspector | 1 | 1.000 | - | - | oto95368 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106252 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X10428 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.850 |