Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001919988.5 | Gene: | vps13d / 567879 | ZFINID: | ZDB-GENE-050912-1 | Length: | 4386 | Species: | Danio rerio |
Alignment Length: | 4970 | Identity: | 856/4970 - (17%) |
---|---|---|---|
Similarity: | 1536/4970 - (30%) | Gaps: | 1953/4970 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIEFV--AKLPDSESKQRRASFQREQRR------KSKRESVEQPDQT 125
Fly 126 KSPGPASSSSVVNKIINNINLQCHNIILKYVEDDI----------VVSMNVQTLNFSSAGEDWKP 180
Fly 181 TMVDIHPVSVVMRKLLQVSDLTICLDKRNT----------AGRIEVCQ---------EPVLYRCT 226
Fly 227 LECRVLRKYNAN--TVSTTSTTRI--GVFTKSLDINVSSLQFPMVMRLVKML------------- 274
Fly 275 --------------------------------------------------------LELKPAEFE 283
Fly 284 DDPQNPEDQEAVAE------------------------------------GSESQQGTESAG--- 309
Fly 310 --RSVF--WWAW---------------SLLPS-------------FDTEAPSSSCDTPT--GHAF 340
Fly 341 ----------DLGVYAEELNFQLKNSEYFTDQSMGGIK-RIRYTP-----ILRISLGGLYYERTI 389
Fly 390 LKECDWANVKAGLSSMCMEPLGAYRSDDLV-----DRNLVNTQEFQQERSFIDKSLFDENYMFAE 449
Fly 450 RSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEH----RVPKPSSHPVAESQLRDL-GVRIQYRL 509
Fly 510 LSAGITFHFSQSFVQVKKVISDLIRPYDYPGYRSESMKDEDRGVPE---PENKNSE---MTIPDL 568
Fly 569 EYLMGLVPTCNYKIELRNIVVQ-----------------LYPRQQQD--------ESSAINQHQL 608
Fly 609 TTTVRQSL-----LPYLQLKISL---------VEGTMCGPVNPVRLVQLITHLEEK--------- 650
Fly 651 PRDVVNACYNCF--HFNVKNLALM------IMNTTPDNGRAKLLNIPRVQVNWNRLLAP------ 701
Fly 702 --HLWRQNEA--PLETSE--IKSEIITLEFSKRELIIAKRLVPLISSFSGQDLCDLAHIVANVNV 760
Fly 761 NSDVIKLQS----------VGTKLNLVYHKYHTHLAAVGSLQGVH-TDAVHTKMNIRNVVLSTSK 814
Fly 815 NAD-----NKWLEMQCQFPLEEVHSEQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGR-QI 873
Fly 874 TKDKEVETDLESVNQSEPPITQSVSNYSTISASAIAFN---DFQPRRISRNNSRKISVPEETVHL 935
Fly 936 ------SSERDERHTQAEPLTIPVANKPQPSNFDTTDFV--KRLTKMVVLVEIAQAKIDVCEVMM 992
Fly 993 RKTPGHTDVEYTSIRLPHMKVKSGNCEA--IQRGNIRGV-IPVASNTELLNWVFDLNEFNVCYRR 1054
Fly 1055 ANVTE----------------------MIIAPVR-TTITLALSFKTSDKVDGSKGKEDKCANTCS 1096
Fly 1097 INVHVDMSAINIFAQRVKLLHEHCLIISKMYGSLCPDEPASKW----QTGKMKPRLEVYTGSAQN 1157
Fly 1158 YPVIKEFLELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDF----KHSKIVMSLEDLL 1218
Fly 1219 LNIDKHSDFNKITTK---------------IENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLPL 1268
Fly 1269 ISVVITTVSLEDLYAKIGAR--------------------NPHNKQHTISEVL------------ 1301
Fly 1302 -----IEVQPIE-----MVLNLD---QITEFM---------VPIC-------EVLEIIGNSASAQ 1337
Fly 1338 S-----ANKPSAPVPSKITT-------------VQDLPMVHLN----SKGIYVYLPL-------- 1372
Fly 1373 ----------------------STGKKSCSVLLLRIE------------SIQLTPSLENPLVRQL 1403
Fly 1404 VRPDIYQKAAEL--------------------------NMLST--PGAL---VEDRQ--YELSVR 1435
Fly 1436 RVSLSTGNWKQTQEYRIEKTLASKHDN--PAFEWNNQSQSTELDHMEIFKDFDFIMIYAPAISYD 1498
Fly 1499 --------RFLVCGQS--VEYNCATDFVASLNTHQISLISCIIVRAQRLGCIIDQVCVK--NAEL 1551
Fly 1552 PKARSH----KTLGNISK-YNSVDNSIYFPADPKVFKKDTWIPKSSKKLVSERLSYTNASTSFTD 1611
Fly 1612 AKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLAAEEINRSG---RQPFVLSYPSSVSFVAGIFVLK 1673
Fly 1674 IYDVLELEE----LERPV-MKPLFLMTVSQPSFMSTQNFKAAVTQ-----ASIFNVNISVAKADV 1728
Fly 1729 DGKVDSERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLHQKEVDVELRKPILLRIC------- 1786
Fly 1787 -------ENTIKQL--ASDVFRIY----TVLHETPCFNVRSPRP----VPEGS------------ 1822
Fly 1823 --QLRQLKMNCYNADRF----------HLSCDRITAKF-----------------------YDEE 1852
Fly 1853 RSYKCSFVWLDVSTRIKFSS--------RPQ--KAVIRSNIG----------------SFYVQSG 1891
Fly 1892 EKMLLHPLLMRL----------------------------------------SVDLVSEPWSEEL 1916
Fly 1917 LVNAT---------------------------------LKLNYLHI-DAGVFSILQLQKAQQGVN 1947
Fly 1948 RIREYADREW----QQFLRSRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRA 2008
Fly 2009 GAFQFVYLNSESVLPMPYQVQIIKKNYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRM--- 2070
Fly 2071 EYFSETHETFLHYCDFMLSETSTKQLTPP--DRPICATIWRVVILQSLISVDGTCFEGSEDED-L 2132
Fly 2133 SI--------------EYLQSDFKVDENN--DFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQ 2181
Fly 2182 DIELNF-----------VNQTDNTGELPKQLNKYRLRQTPNITQTFLTVHVEDLQMHSRIYSRND 2235
Fly 2236 FSLQTEMRAR---VKCLDYGFLNMLDVLEPMKFSSYVRLTDYPRSLVQANFLVDKLRLNCGPHVI 2297
Fly 2298 HTLLSSKYHWQEVLQQKDVRHVLMPKLVIVNRIQTPISFGQTNTVEKIPVNPGEVQLYHFRSCSH 2362
Fly 2363 VQELTFFITNPKTLLVDSSDSVHIALKFEDEEKIHNLRVGEYCI--TLKLAKLSTTQIYILVK-G 2424
Fly 2425 QIELVSMVPFNLVTEFREEEIN-YDESTPPEHLLLSKERSSYYQ----------NVKRNADINMR 2478
Fly 2479 LKL-------------------------TAGLG-RGRTGDIPLKTNNNLPWLVKVPTQSAQQFIS 2517
Fly 2518 IWVRI-LREDIKMDKPAEDFQPQKILICIWPIFEICNMLSCAV-KATESTT------GESSTIEA 2574
Fly 2575 MGGRWALNTATTHATE--------HNIGFTFSG--ILRGSSKDE---YSLMLRTMDWHK------ 2620
Fly 2621 -----FFYY----------------------DPTVW-------------TIENALHKLGKSSKRK 2645
Fly 2646 WPLNDPEELRVSRVLDFENAFDVKYQTKATREF---------------SCCQGLDVTAWGMFING 2695
Fly 2696 TGLYVAIFMIQEQARLDLKANSLQMMPKLKSA----FTIDVRFDNGWKSSTPICL----EDFTQ- 2751
Fly 2752 ---KSSSNAGRSLYLRYNSFVDIVIVERDEVLRLILEYRQEDDGRRLFKLRSKFVFTNFTDVVLN 2813
Fly 2814 -----------------ALTLAMDHKENSTREEV----EAYSICKKARSLVSSESTKNCSGNAMD 2857
Fly 2858 VFYDLNAHKAKHNCDTAFVYFVCFSV------GGSREISIPIP------LAVPFTRR-------- 2902
Fly 2903 ------------------CF---------SLQAG----PESIP--------------LMITLIEK 2922
Fly 2923 DN----VHYLNV--------FRDT-----APAIVISNNTNVKFIVAQ--------TSASENSNVS 2962
Fly 2963 CTNSEFVGRNFEW-----NQL----VLPHSNCYYT-------PPQMYANFPDV----EFTMCNLS 3007
Fly 3008 LAVYKDKLCAKNKIAWS------KPIRTD-------KSWQKFLHVPHHG--DVKV---------- 3047
Fly 3048 -VVCDK-----------------------------HRAIRLNIYYIAQQLEFS------------ 3070
Fly 3071 -------VKDLRSRLTKPENVLM---------------------------PSQEQAAPRP----- 3096
Fly 3097 -----------DESSE----QENDTKRVTLPNMVTCAHFNEECESKTQTRIKIFIKSFVFSLQTD 3146
Fly 3147 --------------NRENDFVKTEV--------CNIYADDSMLIYD----------------DDD 3173
Fly 3174 DQRE-----------------------------------------------------LRLQLPNL 3185
Fly 3186 QVDNQLYSSGKYDFPVLLCAEKLYRRNCSLPQVYDLDHVYKQQAQRTPVSL-FTFIFYQDEMQLQ 3249
Fly 3250 NVRCQIPPFRVYIEDAYLNQLL--------EALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQV 3306
Fly 3307 VAQSLYISEP-LRLNSFTVEPL-------------------NLLLSVHTSSRLYIALDHSPLSFS 3351
Fly 3352 RYERQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGL 3416
Fly 3417 FRGPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGF 3481
Fly 3482 ADG--LTQGLTGLGISLLGAVGGLAHHTLEARSSVGVI----AGLTKGIVGALTKPISGAAEMLA 3540
Fly 3541 LTGQGVLHTVGFNAM--------------PQQVEPSFIRNVALHGSSNRIWSYLPEELSRDQMLF 3591
Fly 3592 FSEIMLQISTQLRPALLFLTSSV-----LAIMQSDSEDLAFASPI---SKVDVLADRE------- 3641
Fly 3642 -----------DPSKLYLSLKSERRDDFEG 3660 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 30/119 (25%) |
VPS13_C | 3319..3468 | CDD:293514 | 35/167 (21%) | ||
ATG_C | 3473..3546 | CDD:286423 | 25/78 (32%) | ||
vps13d | XP_001919988.5 | Chorein_N | 3..112 | CDD:315323 | 29/109 (27%) |
VPS13 | 139..358 | CDD:318996 | 42/236 (18%) | ||
VPS13_mid_rpt | 615..889 | CDD:318998 | 47/281 (17%) | ||
UBA_VP13D | 2650..2685 | CDD:270491 | 9/64 (14%) | ||
SHR-BD | 3285..3568 | CDD:310922 | 47/298 (16%) | ||
VPS13 | <3762..4287 | CDD:330393 | 122/619 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |