Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_056193.2 | Gene: | VPS13D / 55187 | HGNCID: | 23595 | Length: | 4388 | Species: | Homo sapiens |
Alignment Length: | 4757 | Identity: | 842/4757 - (17%) |
---|---|---|---|
Similarity: | 1472/4757 - (30%) | Gaps: | 1733/4757 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIEFVA---KLPDSESKQRRASFQREQRRKSKRESVEQ------PDQ 124
Fly 125 TKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDI-------VVSMNVQTLNFSSAGEDWKPTM 182
Fly 183 VDIHPVSVVMR-KLLQVSDLTICLD------------------KRNTAGRI-EVCQEPVLYRCTL 227
Fly 228 ECRVLRKYNANTVSTTSTTRI--GVFTKSLDINVSSLQFPMVMRLVKMLLELKPAEFE------- 283
Fly 284 ----------------------------------------------------------------- 283
Fly 284 ---DDPQNPED--------------QEAVAEGSESQQ--------GTESAG---------RSVF- 313
Fly 314 -WWAW--------------------SLLPS--------FDTEAPSSSCDTPT--GHAFDLGVYAE 347
Fly 348 ELNFQLK----------------NSEYFTDQSMGGIKRI------RYTPILRISLGGLYY----- 385
Fly 386 ERTIL---------KECDWANVKAGLSSMCMEPLGAYRSDD--------LVDRN----------- 422
Fly 423 --------LVNTQEFQQERSFIDKSLF---------DENYMFAERSWCSYNYADYVARNTDEYML 470
Fly 471 FRSPVLAFDVIEHRVPKPSSHPVAESQLRDLGVRIQYRL-LSA-GITFHFSQSFVQVKKVISDL- 532
Fly 533 ----------IRPYDYPGYRSESMKDED----------RGVPEPE--NKNSEMTIP------DLE 569
Fly 570 YLMG-LVPTCNY-KIELRNIVVQLYPRQQQDESSAINQHQL-TTTVRQSLLPYLQLKISLV---E 628
Fly 629 GTMCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKNLALMIMNTTPDNGRAKLLNIPRVQV 693
Fly 694 NWNRLLAPHLWRQNEAPLETSEIKSEIITLEFSKRELIIAKRLVPLISSFSGQDLCDLAHIVAN- 757
Fly 758 ----VNVNSDVIKLQSV-GTKLNLVYHKYHTHLAAVGSLQGVH----TDAVHTKMNIRNVVLSTS 813
Fly 814 KNADNKWLEMQCQFPLEEVHSE--QEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGRQITKD 876
Fly 877 KEVETDLESVNQSEPPITQSVSNYSTISASAIAFN---DFQPRRISRNNSRKISVPEETVHL--- 935
Fly 936 -----SSERDERHTQAEPLTIPVANKPQPSNFDTTDFVKRLTKM-----------VVLVEIAQAK 984
Fly 985 IDVCEVMMRKTPGHTDVEYTSIRLPHMKV--------------KSGNCEAIQ-----RGNIRG-- 1028
Fly 1029 VIPVASNTELLNWVFDLNEFNVCYRRANVTEMIIAPVRTTITLALSFKTSDKVDGSKGKEDKCAN 1093
Fly 1094 TCSINVHVDMSAINIFAQRVKLLHEHCLIISKM----YGSLCPDEPASKWQTGKMKPRLEVYTGS 1154
Fly 1155 AQNYPVIKEFLELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSN--DFKHSKIVMSLEDL 1217
Fly 1218 LLNIDKHSDFNKITTK---------------IENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLP 1267
Fly 1268 LISVVITTVSLEDLYAKIGAR---------------NPHNKQHTISEVL---------------- 1301
Fly 1302 -IEVQPIE------MVLNLDQI---------TEFMVPIC---------EVLEIIGN--------- 1332
Fly 1333 -SASAQSANKPSAPVPSKITTVQDLPMVHLNSKGIYVYLPLS-TGKKSCSV-------------- 1381
Fly 1382 -------------------LLLRIESIQLTPSLENP-------LVRQLVRPDIYQKAAE---LNM 1417
Fly 1418 LSTPGA-----------------LVEDRQY------------------ELSVRRVSLSTGNWKQT 1447
Fly 1448 Q--EYRIEKTLASKHDNPAFEWNNQSQSTELDHMEIF----KDFDFIMIYAPAISYDRFLVCGQS 1506
Fly 1507 --VEYNCATDFVASLNTHQISLISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNISKYNSV 1569
Fly 1570 DNSIYFPA----DPKVFKKDTWIPKSSKKLVSERLSYTNA----------------STSFTDAKG 1614
Fly 1615 SSDYF------------------YGS----CQSDSGIHLGTRMKG----YSRSLAAEEI------ 1647
Fly 1648 ----NRSGRQ---------------------------PFVLSYPSSVS---FVAGIFVLKI---- 1674
Fly 1675 ---------------------------YDVLELEELERP-------------------VMKPLFL 1693
Fly 1694 MTVS------QPSFMSTQNFKAAVTQASIFNVNISVAKADVD-----------GKVDSERFNESV 1741
Fly 1742 FAT-LPGQLGSSGIPPPLLTIKTQYDRLHQKEV------------------DVELRKPILLR-IC 1786
Fly 1787 ENTIKQLASDVFRIYTVLHETPCFNVRSPR--PVPEGSQLRQLKMNCYNADRFHLSCDRITAKFY 1849
Fly 1850 DEERS-----------YKCSFVWLDVSTRIKFSSRPQKAVIRSNIGSFYVQ-SGEKMLLHPLLMR 1902
Fly 1903 LSVDLVSEPWSEELLVNATLKLNYLHI----DAGVFSILQLQKAQQGVNRIREYADREWQQFLRS 1963
Fly 1964 RPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLNSESVLPMPYQV 2028
Fly 2029 QIIKKNYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEYFSETHETFLHYCDFMLSETS- 2092
Fly 2093 -----TKQLT-PP---DRPICATIWRVVILQSLISVDGTCFEGSE-DEDLSI-EYLQSDFKVDEN 2146
Fly 2147 NDFILHPKVLVGCMRIDTVFRAEKVPK-LQLLLCCQDIELNFVNQTDNTGEL--------PKQLN 2202
Fly 2203 KYRLRQTPNITQ-------TFL-------------TVHVED--LQMHSRIYSRNDFSLQTEMRAR 2245
Fly 2246 VKC-------LDYGFLNMLDVLEPMKFSSYVRLT-DYPRSLV----------------------- 2279
Fly 2280 ------------QANFLVDKLRLNCGPH-VIHTLLSSKYH------WQEVL---------QQKDV 2316
Fly 2317 RHVLMPKLVIVNRIQTPISFGQTNTVEKIPVNPGEVQLYHFRSCSHVQELTFFITNPKTLLVD-- 2379
Fly 2380 -SSDSVHIALKFEDEEKIHNLRVGE------------------YCITLKLAKLSTTQIYILVKGQ 2425
Fly 2426 IELVS----MVPFNLVTEFREEEINYDE--------STPPEHLLLSKERS--------------- 2463
Fly 2464 ---SYYQNVKRNADINMRLKLTAGLGRGRTGDIPLKTNNNLPWLVKVPTQSAQQFISIWVRILRE 2525
Fly 2526 DIKMDKPAEDFQ------------------------PQKILICIWPIFEICNMLSCAVKATESTT 2566
Fly 2567 GESSTIEAMGGRWALNTATTHATEHNIGF----------TFSGILRGSSKDEYSLMLRTMDWH-- 2619
Fly 2620 -------KFFYYDPTVWTIENALHKLG-KSSKRKWPLNDPEELRVSR---VLDFENAFDVK---- 2669
Fly 2670 YQTKATREFS--------------C----CQGLDVTAWGMFINGT---GLYVAIFMIQEQARLDL 2713
Fly 2714 KANSLQMMPKLKSAFTIDVRFDNGWKSSTPICLEDFTQKSSSNAGRSLYLRYNSFVDIVIVERDE 2778
Fly 2779 VLRLILEYRQEDDGRRLFKLRSKFVFTNFTDVVLNALTLAMDHKENSTREEVEAYSICKKARSLV 2843
Fly 2844 SSESTKN---------------------CSGNAMDVFYDLNAHKA-KHNCDTAFVYFVCFSV--G 2884
Fly 2885 GSREISIPIPLAVP-------------FTRRCFSL---QAGPE----SIP--------------- 2914
Fly 2915 -LMITL-------------IEKDNVHYLNV------------------------FRDT---APAI 2938
Fly 2939 VISNNTNVKFIVAQTSASENSNVSCTNSEFVGRNFEWNQLVLP-------------HSNCYYTPP 2990
Fly 2991 Q-----MYANFPDVEFTMCNLSLAVYKDKLCAKNK-------------------IAWSKPIRTDK 3031
Fly 3032 SWQ-----KFLH----VPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFSVKDLRSR---LTKP--- 3081
Fly 3082 ------------------------------------ENVLMP--SQEQAAPRPDESSEQENDTK- 3107
Fly 3108 ---------RVTLPNMVTCAHFNEECESK------------------------TQTRIKIFIK-S 3138
Fly 3139 FVFSLQTDNR---ENDFVKTEVCNIYADDSMLIYDDDDDQRELRLQLPNLQVDNQLYSSGKYDFP 3200
Fly 3201 VLLCAEKLYRRN-------------CSLPQVYDLDHVYKQ---QAQRTPVSLFTFIFYQDEMQLQ 3249
Fly 3250 NVRCQIPPFRVYIEDAYLNQLL--------EALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQV 3306
Fly 3307 VAQSLYISEP-LRLNSFTVEPLNLLLSVHTSSRLY---------IALDHSPLSFSR---YERQQI 3358
Fly 3359 LTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRGPWGF 3423
Fly 3424 LVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAEH-IELTEARRRARPQGFADGLTQ 3487
Fly 3488 GLTGLGISLLGAVGGLAHHTLEARSS----VGVIAGLTKGIVGALTKPISGAAEMLALTGQGVLH 3548
Fly 3549 TVGFNAMPQQVE 3560 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 32/114 (28%) |
VPS13_C | 3319..3468 | CDD:293514 | 45/161 (28%) | ||
ATG_C | 3473..3546 | CDD:286423 | 25/76 (33%) | ||
VPS13D | NP_056193.2 | Chorein_N | 3..112 | CDD:289396 | 31/111 (28%) |
VPS13 | 139..356 | CDD:293513 | 37/231 (16%) | ||
VPS13_mid_rpt | 614..894 | CDD:293515 | 61/302 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 745..796 | 12/50 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1563..1582 | 8/18 (44%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1741..1771 | 7/29 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2070..2108 | 2/37 (5%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2122..2145 | 5/22 (23%) | |||
UBA_VP13D | 2642..2677 | CDD:270491 | 6/38 (16%) | ||
SHR-BD | 3276..3559 | CDD:284143 | 41/287 (14%) | ||
VPS13_C | 3984..4129 | CDD:293514 | 48/172 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |