Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_065872.1 | Gene: | VPS13C / 54832 | HGNCID: | 23594 | Length: | 3753 | Species: | Homo sapiens |
Alignment Length: | 4555 | Identity: | 797/4555 - (17%) |
---|---|---|---|
Similarity: | 1465/4555 - (32%) | Gaps: | 1704/4555 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIE--FVAKLPDS--------------ESKQRRASFQRE-------- 109
Fly 110 ----------------------QRRKSKRESVEQP----DQTK-SPGPASSSSVVNK----IINN 143
Fly 144 INLQCHNIILKYVEDDIV-------VSMNVQTLNFSSAGEDWKPTMVDIHPVSVVMRKLLQVSDL 201
Fly 202 TI-----C-----------LDK-RN---TAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTSTT 246
Fly 247 RIGVFTKS------LDINVS------SLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQEAVAEGS 299
Fly 300 ESQQGTESAGRSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGVYAEELNFQLKNSEYFTDQSM 364
Fly 365 GGIKRIRYTPILRISLGGL------------YYERTILKECDWANVKAGLSSMCMEPLGAYRSDD 417
Fly 418 LVDRNLVN----TQEFQQERSFIDKSLFDENYMFAER-------------------------SWC 453
Fly 454 SYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRDLGVRIQYRLLSAGITFHF 518
Fly 519 SQSFVQVKKVISDLIRPYDYPGYRSESMKDEDRGVPEPENKNSEMTIPDLEYLMGLVPTCNYKIE 583
Fly 584 LRNIVVQL--YPRQQQDESSAINQHQLTTTVR-QSLLPYL----------QLKISLVEGTMCGPV 635
Fly 636 NPVRLVQLITHLEEKPRDV------VNACYNCFHFN-------VKNLALMIMNTTPDNGRAKLLN 687
Fly 688 I--------PRVQVNWNRLLAPHLWRQNEAPLETSEIKSEIITLEFSKRELIIAKRLVPLISSFS 744
Fly 745 GQDLCDLAHIVANVNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNIRNVV 809
Fly 810 LSTSKNADNKWLEMQCQFPLE-------EVHSEQEKIPGTVVCLWLEPFRITTDIYLLQF----- 862
Fly 863 -----LNFSDNSGRQITKDKEVETDLESVNQSEPPITQSVSNYSTISASAIAFNDFQPRRISRNN 922
Fly 923 SRKISVPEETVHLSSERDERHTQAEPLTIPVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKIDV 987
Fly 988 CEVMMRKTPGHTDVEYTSIRLPHMKVKSG---NCEAIQRGNIRGVIPVASNTELLNWV--FDLNE 1047
Fly 1048 FNVCYRRA----------NVTEM-IIAPVRTTITLALSF--KTS---DKVDGSKGKEDKCANTCS 1096
Fly 1097 INVHVDMSAINIFAQRVKLLHEHCLIISKMYGSLCPDEPASKWQT--GKMKPRLEVYTGSAQNYP 1159
Fly 1160 VIKEFLELDPNFEAPKVKSAPKS-SVILFCQWTIPRISFEMENSNDFKHSKIVMSLEDLLLNIDK 1223
Fly 1224 HSDFNKITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLP---------LISVVITTVSLE 1279
Fly 1280 -------------------DLYAKIGARNPHNKQHTISEVLIEVQPIEMVLNLD----QITEFMV 1321
Fly 1322 PICEVLEIIGN---------SASAQSANKPSAPVPSKITTVQDLPM------VHLNSKGIYVYLP 1371
Fly 1372 ---LSTGKKSCSVLLLRIES--------------------IQLTPSLENPLVRQLVRPDIYQKAA 1413
Fly 1414 ELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASK--HDNPAFEWNNQSQSTEL 1476
Fly 1477 DHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCATDFVASLNTHQISLISCIIV--------- 1532
Fly 1533 ------RAQRLGCIIDQVCVK-NAELPKARSHKTLGNISKYNSVD--NSIY-FPADPKVFKKDTW 1587
Fly 1588 IPKSSKK-----------LVSERLSYTNASTS-------------FTDAKGSSDYFYGSCQ-SDS 1627
Fly 1628 GIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSFVAGIFVLKIYDVLELEEL--------- 1683
Fly 1684 -----------ERPVMKPLFLMTVSQPSFMSTQNFKAAVTQASIFNVNISVAK------------ 1725
Fly 1726 --ADV-----DGKVDSERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLHQKEVDVELRKPILL 1783
Fly 1784 RICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQL---------KMNCYN---ADR 1836
Fly 1837 FHLS----------------------CDRITAKFYD-EERSYKCSFVWLDVSTRIKFSSRPQKAV 1878
Fly 1879 ----IRSNIGSFYVQSG------EKMLLHPLLMRLSVDLVSEPWSEELLVNATLKLNYLHIDAGV 1933
Fly 1934 FSILQLQKAQQGVNRIREYADREWQQFLRSRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLK-S 1997
Fly 1998 NAEFYQDDLRAGAFQFVYLNSESVLPMPYQVQIIKKNYGIICWRYPQPRQ--MTSIHIYPVPMPV 2060
Fly 2061 SRPIHIR-----------------CRMEYFSETHETFL-------------HYCDFMLSETSTKQ 2095
Fly 2096 LTPPDRPICATIWRVVILQSLISVDGTCFEGSE-----------DEDLSIEYLQSDFKVDENNDF 2149
Fly 2150 ILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIELNFV--------------NQTDNTGELPKQ 2200
Fly 2201 --LNKYRLRQ----TPNITQTFLTVHVEDLQMHSRI--------------YSRNDFSLQTEMRAR 2245
Fly 2246 V---KCLDYGFL------NMLDVLEPMKFSSYVRLTDYPRSLVQANFLVDKLRLNCGPHVIHTLL 2301
Fly 2302 S------------------------------SKYH-W-------QEVLQQ-KDVRHVLMPKL--V 2325
Fly 2326 IVNRIQTPISFGQTNTVEKIPVNPGE---------------------VQLYHFRSCSHVQE---- 2365
Fly 2366 ---------LTFFI-TNP---KTLLVDSSDSVHIALKFEDEEKIH-------NLRVGEYCITL-- 2408
Fly 2409 KLAK-----LSTTQIYIL-------VKGQIELVSMVPFNL---VTEFREE------------EIN 2446
Fly 2447 YDESTPPEH---LLLSKERSSYY-----------------------------QNVKRNADINMRL 2479
Fly 2480 KLTAGLGRGRTGDIPLKTNN--NLPWLVKVPTQSAQQFISIWVRILREDIKMDKPAEDF------ 2536
Fly 2537 -------QPQKIL---------ICIWP-----IFEICNMLSC---------AVKATESTTGESST 2571
Fly 2572 IEAMGGRWALNTATTHATEHNIGF--------TFSGILRGSSKDEYSLMLRTMDWHKFFYYDPTV 2628
Fly 2629 WTIENALHKLGKSSKRKWPLNDPEELRVSRVLDFENAFDVKYQTKATREFSCCQGLDVTAWGMFI 2693
Fly 2694 NGTGLYVAIFMIQEQARLDLKANSLQMMPKLKSAFTIDVRFDNGWKSSTPICLEDFTQKSSSNAG 2758
Fly 2759 RSLYLRYNSFVDIVIVERDEVLRLILEYRQED-------DGRR--LFKLRSKFVFTNFTDVVLNA 2814
Fly 2815 LTLAMDHKENSTREEVEAYSICKKARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYFV 2879
Fly 2880 CFSVGGSREISIPIPLAVPFTRRCFSLQAG-------------------------PESI--PLMI 2917
Fly 2918 TLI------------EKDNVHYLNVFRDTAPAIVISNNTNVKFIVAQTSASENSNVSCTNSEF-- 2968
Fly 2969 ------VGRNFEWNQLVLPHSNCYYTPPQMYANFPDVEFTMCNLSLAVYKDKLCAKNKIAWSKPI 3027
Fly 3028 RTDK-SWQKFLHVPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFSVKDLRSR-LTKPENVLMPSQE 3090
Fly 3091 QAAPRPDESSEQ-------------ENDTKR------VTLPNMVTCAHFNEECESKTQTRIKIFI 3136
Fly 3137 KSFVFSLQTDNR-------------ENDF--------------VKTEVCNIYADDSMLIYDDDDD 3174
Fly 3175 QRELRLQLPNLQVDNQLYSSGKYDFPVLLCAEKLYRRNCSLPQVYDLDHVYKQQAQRTP---VSL 3236
Fly 3237 FT-FIFYQDEMQLQNVRCQIPPFRVYIEDAYLNQLLEALVECEPSNCVYSPP------------V 3288
Fly 3289 EQDQILLPAGM--TLLPDQVVA---QSLYISEPLRLN------------------SFTVEPLNLL 3330
Fly 3331 L-----SVHTSSRLYIALDHSPLSFSRYERQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEI 3390
Fly 3391 LGSPSGLARSFSTGLRDFVSMPVQGLFRGPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVAR 3455
Fly 3456 NLDRLTLDAEHIELTEARRRARPQGFADGLTQGLTGLGISLLGAVGGLAHHTLEA---RSSVGVI 3517
Fly 3518 AGLTKGIVGALTKPISGAAEMLALTGQGV------------------LHTVGFNAMP---QQVEP 3561
Fly 3562 S-FIRN--VALHGSSNRIWSYLPEELSRDQMLFFSEIMLQISTQLRPALLFLTSSVLAIM----Q 3619
Fly 3620 SDSEDLAFASPIS----KVDV----LADREDPS------KLYL--SLKSERRDDF--EGQLNYTN 3666
Fly 3667 ERIMK 3671 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 32/157 (20%) |
VPS13_C | 3319..3468 | CDD:293514 | 44/171 (26%) | ||
ATG_C | 3473..3546 | CDD:286423 | 22/75 (29%) | ||
VPS13C | NP_065872.1 | Chorein_N | 4..113 | CDD:289396 | 27/112 (24%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 150..176 | 6/25 (24%) | |||
VPS13 | 185..413 | CDD:293513 | 48/336 (14%) | ||
VPS13_mid_rpt | 613..833 | CDD:293515 | 48/302 (16%) | ||
MRS6 | 1046..>2612 | CDD:227376 | 309/1826 (17%) | ||
VPS13_mid_rpt | <1238..1368 | CDD:293515 | 30/200 (15%) | ||
VPS13_mid_rpt | 1690..1882 | CDD:293515 | 40/248 (16%) | ||
SHR-BD | 2764..3016 | CDD:284143 | 56/326 (17%) | ||
WWE | 3116..3181 | CDD:295449 | 8/72 (11%) | ||
VPS13_C | 3323..3500 | CDD:293514 | 47/184 (26%) | ||
ATG_C | 3507..3582 | CDD:286423 | 23/74 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |