Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005167391.1 | Gene: | vps13a / 378837 | ZFINID: | ZDB-GENE-030926-1 | Length: | 3236 | Species: | Danio rerio |
Alignment Length: | 3967 | Identity: | 719/3967 - (18%) |
---|---|---|---|
Similarity: | 1341/3967 - (33%) | Gaps: | 1226/3967 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELSI 69
Fly 70 LVPWTKLMSEPVKIVINTIEFVAKLP--------DSESKQRRASFQREQRR--KSKRESVEQPDQ 124
Fly 125 TKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIV-------VSMNVQTLNFSSAGEDWKPTM 182
Fly 183 VDIHPVSVVMRKLLQVSDLTICLDKRNTAGRIEVCQEP------VLYRCTLECRVLRKYNANTVS 241
Fly 242 TTSTTRIGVFTKSLDINVSSLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQEAVAEGSESQQGTE 306
Fly 307 SAGRSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGVYAEELNFQLKNSEYFTDQSMGGIKRIR 371
Fly 372 YTPILRISLGGLYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDRNLVNTQEFQQERSFI 436
Fly 437 DKSLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRDL 501
Fly 502 GVRIQYRLLSA--GITFHFS--QSFVQVKKV----ISDLIRP------YDYPGYRSESMKDEDRG 552
Fly 553 VPE-PEN-KNSEMTIPDLEYLMGLVPTCNYK-------IELRNIVVQLYPRQQQDESSAINQHQL 608
Fly 609 TTTVRQSLLPYLQLKISLVEG-------TMCGPVNPV--RLVQLITHLEEKPRDVVNACYNCFHF 664
Fly 665 N----------------VKNLALMIMNTTPDNGRAKLLNIPRVQVNWNRLLAPHLWRQNEAPLET 713
Fly 714 SEIKSEIITLEFSKRELIIAKRLVPLISSFSGQD---LCDLAHIVANVNVNSDVIKLQSVGTKL- 774
Fly 775 NLVYHKYHTHLAAVGSLQGVHTDA--------------------VHTKMNIRNVVLSTSKNADNK 819
Fly 820 WLEMQCQFPLEEVHSEQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGRQITKDKEVETDLE 884
Fly 885 SVNQSEPPITQSVSNYSTISASAIAFNDFQPRRISRNNSRKI----SVP-EETVHLSSERDERHT 944
Fly 945 QAEPLTIPVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRKTPGHTDVEYTSIRLP 1009
Fly 1010 HMKVKSGNCEAIQRGNIRGVIPVASNTELLNWVFDLNEF----NVCYRRANVTEMIIAPVRTTIT 1070
Fly 1071 L---ALSFKTSDKVDGSKGKEDKCA---NTCSINVHVDMSAINIFAQRVKLLHEHCLIISKMY-G 1128
Fly 1129 SLCPDEPASKWQTGKMKPRLEVYTGSAQNYPVI----KEFLELDPNFEAPKVKS---APKSS--- 1183
Fly 1184 -----VI-------LFC--------QWTIPRISFE---MENSNDFKHSKIVMSLED-LLLNIDKH 1224
Fly 1225 SDFNKITTKIENFGLNYYEEKH---EEWEKIDDLHIKMLGDSTNLPLISVVITTVSLEDLYAKIG 1286
Fly 1287 ARNPHNKQHTISEV-----------LIEVQPIEMVLNLDQITEFMVPICEVLE-------IIGNS 1333
Fly 1334 ASAQSANK---PSAPVPSKITTVQDLPMVHLNSKGIYVYLPLSTGKKSCSVLLLRIESIQLTPSL 1395
Fly 1396 ENPLVRQLVR--PDIYQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLAS 1458
Fly 1459 KHDNPAFEWNNQSQSTELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCATDFVASLNTHQ 1523
Fly 1524 ISLISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNISKYNSVDNSIYFPADPKVFKKDTWI 1588
Fly 1589 PKSSKKLVSERLSYTNAST-SFTDAKGSSDYFYGSCQSD---SGIHLGTRMKGYSRSLAAEEINR 1649
Fly 1650 SGRQPFVL---SYPSSVSFVAGIFVLKIYDVLELEELERPVMKPLFLMTVSQPSFMSTQNFKAAV 1711
Fly 1712 TQASIFNVNISVAKADVDGKVDSERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLHQKEVDVE 1776
Fly 1777 LRKPILLRICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNADRFHLSC 1841
Fly 1842 DRITAKFYDEERSYKCSFVWLDVST-----RIKFSSRPQKAVIRSNIGSFYVQSGEKMLLHPLLM 1901
Fly 1902 RLSVDLVSEPWSEELLVNA-TLKLNYLHIDAGVFSILQLQKAQQGVNRIREYADREWQQFLRSRP 1965
Fly 1966 VLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLNSE----SVLPMPY 2026
Fly 2027 QVQIIKKNYGIICWRYPQPRQMTSIHIYPVPMPVSRP------------IHIRCRM----EYFSE 2075
Fly 2076 THETFLHYCDFMLSETSTKQLTPPD----RPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEY 2136
Fly 2137 LQSDFKVDENNDFILHPKVLVGCMRIDTVFRAEKVPKLQLLLC-CQDIELNFVNQTDNTG----E 2196
Fly 2197 LPKQLNK-YRLRQTPNITQTFLTVHVEDLQMHSRIYSRNDFSLQTEMRARVKCLDYGFLNMLDVL 2260
Fly 2261 EPMKFSSYVRLTDYPRSLVQANFLVDKLRLNCGPHVIHTLLSSKYHWQEVLQQKDVRHVLMPKLV 2325
Fly 2326 IVNRIQTPISFGQTNTVEKIPVNPGEVQLYHFRSCSHVQELTFFITNPKTLLVDSSDSVHIALKF 2390
Fly 2391 EDEEKIHN-----LRVGEYCITLKLAKLSTTQIYILVKGQIELVSMVPFNLVTEFREEEINYDES 2450
Fly 2451 TPPEHLLLSKERSSYYQNVKRNA---DINMRLKLTAGLGRGRTGDIPLKTNNNLPWLVKVPTQSA 2512
Fly 2513 QQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIFEICNMLSCAVKATESTTGESSTIEAMGG 2577
Fly 2578 RWALNTATTHATE-HNIGFTFS-------GILRGSSKDEYSLMLRTMDWHKFFYYDPTVWTIENA 2634
Fly 2635 LHKLGKSSKRKWPLNDPEELRVSRVLDFENAFDVKYQTKATREFSCCQGLDVTAWGMFINGTGLY 2699
Fly 2700 VAIFMIQEQARLDLKANSLQMMPKLKSAFTIDVRFDNGWKSSTPICLEDFTQKSSSNAGRSLYLR 2764
Fly 2765 YNSFVDIVIVERDEVLRLILEYRQEDDGRR---------LFKLRSKFVFTNFTDVVLNALTLAMD 2820
Fly 2821 HKENSTREEVEAYSICKKARSLVSSESTKNCSGNAMDV---------------------FYDLNA 2864
Fly 2865 HKAKHNCDTAFVYFVCFSVGGSREISIPIPLAVPF-----TRRCFSLQAGPESIPLMITLIEKDN 2924
Fly 2925 VHYLNVFRDTAPAIVISNNTNVKFIVAQTSASENSNVSCTNSEFVGRNFEWNQLVLPHSNCYYTP 2989
Fly 2990 PQMYANFPDVEFTMCNLSLAVYKDKLCAKNKI-----------AWSKPIRTD-KSWQ--KFLHVP 3040
Fly 3041 HHGDVK-----VVVCDKHRAIRLNIYYIAQQ---LEFSVKDLRSRLTKPENVLMPSQE------- 3090
Fly 3091 QAAPRPDESSEQENDTKRVTLPNMVTCAHFNEECESKTQTRIKIF-IKSFVFSLQ--TDNRENDF 3152
Fly 3153 VKTEVCNIYADDSMLIYDDDDDQRELRLQLPNLQVDNQLYSSGKYDFPVLLCAEKLYRRNCSLPQ 3217
Fly 3218 V---YDL---DHVYKQQAQRTPV------SLFTFIFY-----------QDEMQLQNVR------- 3252
Fly 3253 ----CQIPPFRVYIED-------AYLNQLLEALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQV 3306
Fly 3307 VAQSLYISEPLRL-NSFTVEPLNLLLSVHTSS------------------RLYIAL--------D 3344
Fly 3345 HSPLSFS------RYE---RQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARS 3400
Fly 3401 FSTGLRDFVSMPVQGLFRGPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAE 3465
Fly 3466 HIELTEARRRARPQGFADGLTQGLTGLGISLLGAVGGLAHHTL---EARSSVGVIAGLTKGIVGA 3527
Fly 3528 LTKPISGAAEMLALTGQGVLHTVGFNAMPQQVE----PSFIRNVALHGSSNRIWSYLPEELSRDQ 3588
Fly 3589 ML 3590 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 30/121 (25%) |
VPS13_C | 3319..3468 | CDD:293514 | 47/184 (26%) | ||
ATG_C | 3473..3546 | CDD:286423 | 23/75 (31%) | ||
vps13a | XP_005167391.1 | MRS6 | 4..>2027 | CDD:227376 | 449/2606 (17%) |
Chorein_N | 4..113 | CDD:289396 | 25/110 (23%) | ||
VPS13 | 142..370 | CDD:293513 | 46/302 (15%) | ||
VPS13_mid_rpt | 575..798 | CDD:293515 | 41/257 (16%) | ||
VPS13_mid_rpt | 1174..>1351 | CDD:293515 | 33/188 (18%) | ||
SHR-BD | 2242..2514 | CDD:284143 | 59/360 (16%) | ||
VPS13_C | 2828..3005 | CDD:293514 | 46/183 (25%) | ||
ATG_C | 3008..3087 | CDD:286423 | 24/78 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |