DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13B and Vps13b

DIOPT Version :9

Sequence 1:NP_651753.2 Gene:Vps13B / 43550 FlyBaseID:FBgn0039727 Length:3731 Species:Drosophila melanogaster
Sequence 2:NP_001128358.1 Gene:Vps13b / 315036 RGDID:1311183 Length:3995 Species:Rattus norvegicus


Alignment Length:4301 Identity:996/4301 - (23%)
Similarity:1724/4301 - (40%) Gaps:1044/4301 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
            ||||:||||:|||.:|:||.:..|.|:|||.|:|....|:|:|:|||:||.||...:|||||||.
  Rat     2 LESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHIHELR 66

  Fly    69 ILVPWTKLMSEPVKIVINTIEFVAKLPD----------SESKQRRASFQREQRRKSKRESVEQPD 123
            |.||||||.||||.|.|||:|.:.||.|          |.|..|..:...:...|.:|.....|.
  Rat    67 IHVPWTKLGSEPVVITINTMECILKLKDGIQDDHESCGSNSTNRSTAENTKSSTKLRRIQQAAPT 131

  Fly   124 QTKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIVVSMNVQTLNFSSAGEDWKPTMVDIHPV 188
            ....| |....|::.:::||:|:..:|:||||||||||:|:|:.:....:.||.|....:||...
  Rat   132 DPDLP-PGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYTVGELWDRAFMDISAT 195

  Fly   189 SVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTSTTRIGVFTK 253
            .:|:||.:..||.|:||||||.:|:||..|:|:||:|:...|:...|:.......|..:|....:
  Rat   196 DLVLRKAINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHFTYDNLNSKMPSVIKIHTLVE 260

  Fly   254 SLDINVSSLQFPMVMRLVKMLLEL--------KPAEFED---------------------DPQNP 289
            ||.::::..|.||.:|::::.:.|        |..|.||                     |.|.|
  Rat   261 SLKLSITDQQLPMFIRIMQLGIALYYGEIGNFKDGETEDPACLSKDPLGNLTGTEDETRLDMQYP 325

  Fly   290 ---EDQEAVAEGSESQQGTESAGRSVFWWAWSLLP---SFD--------TEAPSSSCDTPTGHAF 340
               :.||...:..|..||..|       ||||.:|   |:|        |: |:|:......|..
  Rat   326 APYKGQELYPQDYEEPQGWVS-------WAWSFVPAIVSYDDGEEDYPGTD-PASTMHQQKAHTL 382

  Fly   341 -----DLGVYAEELNFQLKNSEYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKE----CDWA 396
                 .:|.|..:.....|.:|...:.|....::::...:|.....|...|..::.|    |...
  Rat   383 KDPIVSVGFYCTKATVTFKLTEMQAENSYYSPQKVKSKEVLCWEQEGTTIEALMMGEAFFDCQIG 447

  Fly   397 NVKAGLSSMCMEP-LGAYRSDDLVDRNLVNTQEF-------QQERSFIDKSLFD----ENYMFAE 449
            .|  |..:||::. :|....::.:||:......|       .:..:::..||||    ||.  ..
  Rat   448 FV--GCRAMCLKGIMGVKDFEEHMDRSETEACFFICGENLSTKGLTYLTNSLFDYRSPENN--GT 508

  Fly   450 RSWCSYNYADYVARNTDEYMLFRSPVLAFD---VIEHRVPK-PSSH---PVAESQLRDLGVRIQY 507
            |:..:.:.|.:...:|:...:.|......|   .:||...| |||.   |..:::  |.|: :|.
  Rat   509 RAEFTLDAAHHKEIHTEIAGMQRFGAFYMDYLYTMEHSSGKGPSSQQDFPSGKNE--DFGI-VQE 570

  Fly   508 R----LLSAGITFHFSQSFVQ--VKKVISDLIRPYD-YPGYRSESMKDEDRGVPEPENKNS-EMT 564
            :    |:...:......|.|.  :|.::..:...|: |...:.|| |||...|..||...| |..
  Rat   571 KSTKSLVIGPLDCRLDSSAVHRVLKMIVCAMEHEYEPYSRLKPES-KDEKEVVLNPEEVASLEEY 634

  Fly   565 IPDLEYLMGLVP-TCNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSL--LPYLQLKISL 626
            ||.....:.|:. ||...:...|::.:|.|.....::::   |....|..|||  ||.:|:.:..
  Rat   635 IPTRHTSVTLLKCTCTIFMAEFNLLDRLLPVIMGGKNAS---HFTNATNFQSLRPLPSIQILVDK 696

  Fly   627 VEGTMCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKNLALMIMNTTPDNGRAKLLNIPRV 691
            :......|:...:||.:::.|.:...::::.||  .|..:|........|..:...:..|..|.|
  Rat   697 INLEHSVPMYAEQLVHVVSSLTQPSDNLLHYCY--VHCYLKVFGFQAGLTCLEQSGSHCLPAPIV 759

  Fly   692 -----QVNWNRLLAPHLWRQNEAPLETSEI-KSEIITLEFSKRELIIAKRLVPLISSF-SGQDLC 749
                 .:...||..|.||.:....:.|..| :...:|::.::.:.::.:.:..  |.| ||    
  Rat   760 PSFSTALYGKRLKLPALWTKRSQTVVTEGIFELPNLTIQATRAQTLLLQAVYQ--SWFHSG---- 818

  Fly   750 DLAHIVANVNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKM---------NI 805
            :.:....|..:.::|.:...|.:|..|.        ...||:|.|......|.:         :|
  Rat   819 NASSSTVNEALMNEVFQTTGVKSKNPLP--------TLEGSIQNVELKYCSTSLVKCASGTLGSI 875

  Fly   806 RNVVLSTSKNADNKWLEMQCQFPLE--EVHS----EQEKIPGTVVCLWLEPFRITTDIYLLQFLN 864
            :....:...:...|.:.: .|.|.:  ::||    .:.:.|.::    |.|..|...|.:.|:::
  Rat   876 KICAKAPGDSGKEKLIPL-LQGPSDTRDLHSTKWLNESRKPESL----LAPDLIAFTIQVPQYMD 935

  Fly   865 FSDNSG-------------------------------RQITKDKEVETDL-ESVNQ--------- 888
            :..:||                               |.|.:...|...| .|||:         
  Rat   936 YCHHSGAVFLCSVQGLAVNLDPILYTWVIYQPHKRTSRHIQQQPVVAVPLVTSVNRRREDELSVG 1000

  Fly   889 SEPPITQSVSNYSTISASAIAFNDFQPRRISRNNSRKISVPEETV-HLSSE-RDERHTQAEPLTI 951
            |.|     :....:..||..|.:..:.:.::  .||.:|||.:.| |:..| |.......|.:.|
  Rat  1001 SAP-----LGKQQSYQASEYASSPIKTKTVT--ESRPLSVPVKAVMHIHEECRSPEDKMKEFIAI 1058

  Fly   952 PVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRK----TP---------------- 996
                        ..:.||.||        .|..:..|.|.:..    :|                
  Rat  1059 ------------LWNAVKSLT--------LQLDVQSCCVFIPNDSLPSPSTIVSGDIPGTVRSWY 1103

  Fly   997 -GHTDVEYTSIR-LPHMKVKSG---NCEAIQRGNIRGVI--PVASNTELLNWVFDLNEFNV-CYR 1053
             |.|.:..|.:. ||.:|:.|.   :.|.:|  .|..||  |:....:...|...|:.|:: ...
  Rat  1104 HGQTSIPGTLVLCLPQIKIVSAGHKSMEPLQ--EIPFVIPRPILEEGDAFPWTISLHHFSIYTLL 1166

  Fly  1054 RANVTEMIIAPVRTTITLALSFKTSDKV--DGSKGKEDKCANTCSINVHVDMSAINIFAQ--RVK 1114
            ...||..::.|:..|.|||:   ||.::  .|.:|:     ::..:.:|||:.::.|...  :|:
  Rat  1167 GKQVTLSLVEPMGCTSTLAV---TSQQLLPVGPEGR-----HSFVVCLHVDLESLEIKCSNPQVQ 1223

  Fly  1115 LLHEHCLIISKMY------GSLCPDE----------PAS--KWQTGKMKPRLEVYTGSAQNYPVI 1161
            |::|...|:||::      |.|.|..          |.|  :...|...|.....:.||      
  Rat  1224 LIYELADIMSKVWNKIQKRGHLSPSSVYSDTMAGPVPGSPVRSSVGTAPPDTSTCSPSA------ 1282

  Fly  1162 KEFLELDPNFEAPKVKSAPKS--------------------SVILFCQWTIPRISFEMENSN-DF 1205
                ::....|...:::|..|                    .|.|:.||.:|:::.::...: :.
  Rat  1283 ----DIGTTTEGDSIQAADDSPFSDSVTLEQTTSHIGGSSGRVSLWMQWVLPKVTVKLFAPDLEK 1343

  Fly  1206 KHSKIVM--SLEDLLLNIDKHSDFNKITTKIENFGLNYYEEK-HEEWE--KIDDLHI-------- 1257
            |.:::.|  .||||..:||....:.|:..|||:|.:::|:.: .|.|:  :.:.:.:        
  Rat  1344 KDTEVCMVSELEDLSASIDVQDVYTKVKCKIESFSIDHYQSRPGEGWQSGQFEGVFLQCKEKPVT 1408

  Fly  1258 --KML-GDSTNLPLISVVITTVSLEDLYAKIGARNPHNKQHTISEVLIEVQP---IEMVLNLDQI 1316
              |:| |.......:|:..|....:::..|:.:|:.....|.:||.|::..|   .|::|:..  
  Rat  1409 TTKLLDGAHQQHGFLSLTYTKAVTKNVRHKLTSRSERRSFHKLSEGLMDGSPHFLHEILLSAQ-- 1471

  Fly  1317 TEFMVPIC-EVLEIIGN-------SASAQSANKPSAPVPSKITTVQDLPMVHLNSKGIYVYLPLS 1373
             .|.:.:| .:|..|.:       ....:.......|:.:...|.::||::::|:..|.:::| .
  Rat  1472 -AFDIVLCFPLLNAIASIFYTKLPKTQREKRKSSGQPMRTHTLTSRNLPLIYINTSVIRIFVP-Q 1534

  Fly  1374 TGKKSCSV----------LLLRIESIQLTPSLENPLVRQLVRPDIYQKAAELNMLSTPGALVEDR 1428
            |.:...||          ::|::.|:.:.|..:|||.|.::|.||||:|..|.:|..||:.:|||
  Rat  1535 TEETQSSVTVNQAAKEDTMVLKVGSVSMAPQADNPLGRSVLRKDIYQRALNLGILRDPGSEIEDR 1599

  Fly  1429 QYELSVRRVSLSTGNWKQTQEYR------IEKTLASKHDNPAFEWNNQSQSTELDHME------- 1480
            ||::.::.:|:.|..|.|.:..:      :.........|||.|||..|....  |.|       
  Rat  1600 QYQIDLQSISIGTAQWDQLKPEKGSGTGGVPTESERNSQNPALEWNMASSIQR--HQERRAILTP 1662

  Fly  1481 IFKDFDFIMIYAPAISY-----------DRFLVCGQSVEYNCATDFVASLNTHQISLISCIIVR- 1533
            |..||...:..||||.:           :..||||.|:|.|..|.....|:..|:.|:..::.. 
  Rat  1663 ILTDFSVRITGAPAIIFTKIISPENLHMEEVLVCGHSLEVNITTSLDFFLSVAQVQLLHQLVAAN 1727

  Fly  1534 -------------------------------------AQRLGCIIDQVCVKNAELPK---ARSHK 1558
                                                 ||..|...|.|.::..::.:   |..|:
  Rat  1728 MTGSEPSAKATEISKHEQKKADTFDAGTAETSSGCSGAQDSGIGSDSVRIRIVQIEQHSGASQHR 1792

  Fly  1559 TLGNISKYNSVDNSIYFPADPKVFKKDTWIPKSSKKLVSERLS-YTNASTSFTDAKGSSDYFYGS 1622
            ......:.:.|.|..:.|.|  :|            :.:.|:| .|.:|.:....|...      
  Rat  1793 IARPSHQSSIVKNLNFIPFD--IF------------ITASRISLMTYSSVALPKCKLPE------ 1837

  Fly  1623 CQSDSGIHLGTRMKGYSRSLAAEEINRSGRQP---FV--------LSYPSSVSFVAGIFVLKIYD 1676
             |.:.|       |....||...|::....:|   ::        ||  :|.||.:|    |...
  Rat  1838 -QKEGG-------KTGKSSLNLPEVDSDAAKPNQAYISMATAEDPLS--TSTSFSSG----KKIR 1888

  Fly  1677 VLELEELE---RP----------VMKP-----------LFL-MTVSQPSFMSTQNFKAAVTQASI 1716
            ||.||.|.   ||          |.:|           ||| :.|||||.:.:.:.:....:.||
  Rat  1889 VLSLESLHASTRPSARQALGVTVVRQPGRRGTGDLELDLFLHLIVSQPSLLLSCHHRKQRMEISI 1953

  Fly  1717 FNVNISVAKADV----DGKV--DSERFNESVFATLPGQLGS-SGIPPPLLTIKTQYDRLHQK--- 1771
            |:..:....:|.    .||.  ::..:|.....|:||:..| |||||.|:|       ||.|   
  Rat  1954 FDATLKGVASDYKCADPGKTLPEASDYNIVWLQTVPGETDSKSGIPPSLIT-------LHIKDFL 2011

  Fly  1772 ----EVDVELRKPILLRICENTIKQL---ASDVFRIYTVLHET-------PCFNVRSPRPVPEGS 1822
                ::.:::.||:...:....:.|:   ...:.:.::..|.|       ...| |...||.:  
  Rat  2012 NGPADISLDVSKPLKANLSFTKLDQINHFLKKIKKAHSSAHSTETSASSDSMLN-RDEPPVSK-- 2073

  Fly  1823 QLRQLKMNCYNADRFHLSCDRITAKFYDEERSYKCSF---VWLDVS---------TRIKFS---- 1871
                    ||:.   .||    ..|.|.:| :.|.||   :|..:|         |:|..|    
  Rat  2074 --------CYHG---KLS----KPKVYCDE-AQKTSFQENMWRVISCFQKVSVHTTQIVVSMETV 2122

  Fly  1872 SRPQKAVIRSNI----GSFYVQSGEKM----LLHPLLMRLSVDLVSEPWSEELLVNATLKLNYLH 1928
            ..|.|..:.:::    ||..|::.:|:    |....|:.:|          :.|:..:|| ....
  Rat  2123 PHPHKPCVLASLSNLNGSLSVKAAQKVFGASLGSSFLLNIS----------DALLKTSLK-ERSR 2176

  Fly  1929 IDAGVFSILQLQKA-----------QQGVNRIREYADRE-------W-QQFLRSRPVL-----GT 1969
            |..|.||.....:|           ||.:.:|.  .|..       | |:.|....:|     |.
  Rat  2177 ILIGPFSAAVNLEAKWCKHSGNPGPQQSIPKIS--MDLRGGLLQVFWGQEHLNCLALLHELFDGY 2239

  Fly  1970 PKDVSPCNLIKCTPSHESIERIKRPLKS----NAEFYQDDLRAGAFQFVYLNSESVLPMPYQVQI 2030
            .|:.....:    |..||..:...|::.    ..|...||||.|.||  |:.....|.:|...::
  Rat  2240 LKEEGKSEM----PVPESAPQTPSPMEKAQAFKTEQSSDDLRTGIFQ--YIQDAEPLKLPGMNEV 2298

  Fly  2031 I-----KKNYGIICWRYPQPRQMTSIHIYPVPMPVSRP-----------IHIRCRMEYFSETHET 2079
            :     :::.|::.||||:||.:|.|.|.|||...:..           :.:.|.:||:.|..:.
  Rat  2299 LFYNETEESPGMMLWRYPEPRVLTLIRITPVPFNTTEDPDISTADLGDVLQVPCSLEYWDELQKV 2363

  Fly  2080 FLHYCDFMLSETSTKQLTPPD--------RPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEY 2136
            |:.:.:|.|||:...:|..||        :.:.:.:||:|:..:..:.|.   :.|..|..|   
  Rat  2364 FVAFQEFSLSESKVCELQLPDINLVHDQKKLVSSDLWRIVLNNNQNTTDD---QSSASESGS--- 2422

  Fly  2137 LQSDFKVDENNDFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIELNFVNQTDNTGEL-PKQ 2200
             ||..:.      ::.|..|..|.|:|:.|....||.|.:......:|....:..|..|.. |:.
  Rat  2423 -QSTCEP------LVTPTALAACTRVDSCFTPWFVPSLCVSFQLAHLEFRLCHHLDQLGTASPQH 2480

  Fly  2201 LNKYRLRQTPNITQTFLTVHVEDLQMHSRIYSRNDFSLQTEMRARVKC--LDYGFLNMLDVLEPM 2263
            |..:...:.......::.:...:..::.:.::......:....::|.|  |:...:.|..|::|.
  Rat  2481 LQPFVSDKNVPSELEYMIISFREPNLYLQQWNSAPVCREIRFSSQVDCKLLECRNVTMQSVVKPF 2545

  Fly  2264 KFSSYVRLTDY-PRSLVQANFLVDKLRLNCGPHVIHTLLSSKYHWQEVLQQK--DVRHVLMPKLV 2325
            .....:.|:.. .:.|:....::|.:.:|.|.||:|:|.::...||   |.|  :|..::....|
  Rat  2546 GICGQMALSSSGGQKLLDCTVILDSVLVNFGQHVVHSLSTAIQAWQ---QNKCPEVEELVFSHFV 2607

  Fly  2326 IVNRIQTPISFGQTNTVEKIPVNPGEVQLYHFRSCSHVQELTFFITN------PKTLLVDSSDSV 2384
            |.|..|..:.|||.:|.|.|.:.......|.:||....|.|...|..      .:..:||.:.:.
  Rat  2608 ICNDTQETLRFGQVDTDENILLASLHSHQYSWRSHKSPQLLHICIEGWGNWRWSEPFVVDHTGTF 2672

  Fly  2385 HIALKFEDEEKIHNLRVGEYCITLKLAKLSTTQIYILVKGQIELVSMVPFNLVTEFREEEINYD- 2448
            ...::::....         .:.:|:..||..|..|::.|:..:.|.:..::..:..:..|..| 
  Rat  2673 IRTIQYKGRTA---------SLIIKVRPLSGVQKQIIICGRQIICSYLSQSIELKVVQHYIGQDG 2728

  Fly  2449 ESTPPEHL--LLSKERSSYYQNVKRNADINMRLKLTAGLGRGRTGDIPLKTNNNLPW-------- 2503
            ::...||.  |.:|::...|  :..|:::.               ::.:|...:..|        
  Rat  2729 QAVVREHFDCLTAKQKLPSY--ILENSELT---------------ELCVKAKGDEDWSRDVCLEP 2776

  Fly  2504 -------LVKVPTQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIFEICNMLSCAVKA 2561
                   :::||| |....|.:|..:|..:       .:.|.|:.:|...|:|.:.:.|.     
  Rat  2777 KAPEYSTVIQVPT-SNSSIIYVWCTVLTLE-------PNSQVQQRMIVFSPLFIVRSHLP----- 2828

  Fly  2562 TESTTGESSTIEAMGGRWALNTATTHATEHNIGFTFSGIL--RGSSKDEYSL---MLRTMDWHKF 2621
                                :...||..:.::|...:.|:  ||.....:|:   ::..:.:...
  Rat  2829 --------------------DPIITHLEKRSLGLRETQIIPGRGQENPLHSVEPDLVHHLTFQAR 2873

  Fly  2622 FYYDP-----------------------TVWTIENALHKLGKSSKRKWPLNDPEELRVSRVLDFE 2663
            ..|||                       ||..:.:..:...||.:..||.:..:..|..::..::
  Rat  2874 EEYDPSDCAVPISTALIKQITTKIQPGSTVNEMLDEFYGSEKSHEPTWPYSQKDSDRNEQLSQWD 2938

  Fly  2664 NAFDVKYQTKATREFSCCQGLDVTAWGMFINGTGLYVAIFMIQEQARLDLKANSLQMMPKLKSAF 2728
            :...|:  ....:.:.....:::..|.:.||.:...:.:|. .|:..|.:.|..:.:.|..:.||
  Rat  2939 SPMRVR--LSMWKPYVRTLLIELLPWALLINQSKWDLWLFE-GEKIVLQVPAGKIIIPPNFQEAF 3000

  Fly  2729 TIDVRFDNG---WKSSTPICLEDFTQ---KSSSNAGRSLYLRYNSFVDIVIVERDEVLRL----- 2782
            .|.:.:.|.   .||.....:.:.|.   |...| |..:.|...:|||..|       ||     
  Rat  3001 QIGIYWANTNTVHKSLAIKLVHNLTSPKWKDGGN-GEVVTLDEEAFVDAEI-------RLGAFPG 3057

  Fly  2783 ---ILEY---RQEDDGRRLFKLRSKFVFTNFTDVVL-----NALTLAMDHKENSTREEVEAYSIC 2836
               :.::   .....|.::.::..|....|.|...:     .:::.....||:....:...:|||
  Rat  3058 HQKLCQFCISSMVQHGIQVIQIEDKTTVINNTPYEIFYKPHLSVSNPYSGKEHLHVPDSATFSIC 3122

  Fly  2837 KKARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYFVCFSVGGSREISI---PIPLAVP 2898
            ..........|:..|        :|:.........||..:         .::|.:   |:|.|  
  Rat  3123 PGGEHPDVKSSSLPC--------WDIMPDVGPSVLDTTIL---------QKQILLGFSPVPGA-- 3168

  Fly  2899 FTRRCFSLQA--------GPESIP-------------LMITLIEKDNVHYLNVFRDTAPAIVISN 2942
            .:.:|:||.|        ...::|             :.:|..|...|.||.:..|.:|.:|..|
  Rat  3169 DSSQCWSLPAIIRREFPRQSVAVPFGTLREDGFCTRAIALTYQEHFGVTYLTLSEDPSPRVVFHN 3233

  Fly  2943 NTNVKFIVAQT-SASENSNVSCTNSEFVGRNFEWNQLVLPHSNCYYTPPQMYANFPDVEFTMCNL 3006
            ...|..:|.:. ..|....|.|             :.:.|.|:.::.......::||.:......
  Rat  3234 RCPVTILVKENIRDSPKFEVYC-------------KKIPPESSIHHELYHQIISYPDCKTKDLLP 3285

  Fly  3007 SLAVYKDKLCAKNKIAWSKPIRTDKSWQKFLHVPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFSV 3071
            ||.:..|.: .:....||.|:..:....:.:.:...|.|.|              .||||.....
  Rat  3286 SLFLRVDTM-EEMPAEWSDPVDINSQGTQVVFLTGFGYVYV--------------DIAQQCGTVF 3335

  Fly  3072 KDLRSRLTKPENVLMPSQEQAAPRPDESSEQENDTKRVTLPNMVTCAHFNEECESKTQTRIKIFI 3136
                        :::..:.:|.|....:|.        .|..|||               .::||
  Rat  3336 ------------IILAPEGKAGPIFTSASR--------ALERMVT---------------FRMFI 3365

  Fly  3137 KSFVFSLQTD------------NRENDFVKTEVC---------------NIYADDSMLIYDDDDD 3174
            .....::..|            ..:|.|:....|               .:|..:   :|..|  
  Rat  3366 TQLSLAVSDDLTHQAPSELLRLTLDNVFLHVSPCVPGVLPGEEPPSSFFQLYGVE---VYCGD-- 3425

  Fly  3175 QRELRLQLPNLQVDNQLYSSGKYDFPVLLC-AEKL--------------------YRRNC----- 3213
                      ||:||||||...:.|.||:| .||.                    |:.||     
  Rat  3426 ----------LQLDNQLYSKSSFHFAVLVCRGEKTEPAQYSKVHSLLVSSKDLEDYKENCFIKLC 3480

  Fly  3214 ---SLPQVYDLDHVYKQQAQRTPVSLFTFIFYQDEMQLQNVRCQIPPFRVYIEDA---YLNQLLE 3272
               |..:.:.||           ||.|||              ::.|.|:|:||.   |:..|.:
  Rat  3481 LTVSEGKDFLLD-----------VSEFTF--------------ELKPARLYVEDTFVYYIKTLFD 3520

  Fly  3273 ALVECEPSNCVYSP--PVEQDQILLPAGMTLLPDQVVAQSLYISEPLRLNSFTVEPLNLLLSVHT 3335
                      .|.|  .:......|..|..|||.||...:..:..|::|....::|::||:|:|.
  Rat  3521 ----------TYLPHSRLAGHHAQLRTGKQLLPMQVTQHAKALVNPVKLRKLVIQPVSLLVSIHA 3575

  Fly  3336 SSRLYIALDHSPLSFSRYERQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARS 3400
            |.:||||.||:|||||.:||..:.|...:...:|.:||.:||:|.||||||||||||||:.|.||
  Rat  3576 SLKLYIASDHTPLSFSVFERGPLFTTARQLVHALAMHYAAGALFRAGWVVGSLEILGSPASLVRS 3640

  Fly  3401 FSTGLRDFVSMPVQGLFRGPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAE 3465
            ...|:.||..:|.:||.|||..|:.||::|:.|.:|:::.||:.|:|.||.|:|||:|||:||.|
  Rat  3641 IGNGISDFFRLPYEGLTRGPGAFVSGVSRGTTSFVRHISKGTLTSITNLATSLARNMDRLSLDEE 3705

  Fly  3466 HIELTEARRRARPQGFADGLTQGLTGLGISLLGAVGGLA-------HHTLEARSSV-----GVIA 3518
            |....|..||..|:..::||.|||:.|||||||||.|:.       ..|.|.::|.     |||:
  Rat  3706 HYTRQEEWRRQLPESLSEGLRQGLSRLGISLLGAVAGIVDQPMQNFQKTSETQASAGHKAKGVIS 3770

  Fly  3519 GLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAMP-QQVEPSFI-RNVALHGSSNRIWSYLP 3581
            |:.|||:|..||||.||||:::.||.|:||..|.:.:| |:.:|:.: .:.|.:.....:|..| 
  Rat  3771 GVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRCQPTHLYADQAPNSHVKYVWKML- 3834

  Fly  3582 EELSRDQM-LFFSEIMLQISTQLRPALLFLTSSVLAI--MQSDSEDLAFASPISKVDVLADREDP 3643
            :.|.|.:: :....::::.|.|.....|.|||.||.:  :..|::..||  ||:::|...|.:..
  Rat  3835 QSLGRPEVHMALDVVLVRGSGQEHEGCLLLTSEVLFVVSISEDTQQQAF--PITEIDCAQDTKQK 3897

  Fly  3644 SKLYLSLKSER 3654
            :.|.:.||..|
  Rat  3898 NLLTVQLKQPR 3908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13BNP_651753.2 Chorein_N 5..117 CDD:289396 60/121 (50%)
VPS13_C 3319..3468 CDD:293514 76/148 (51%)
ATG_C 3473..3546 CDD:286423 39/84 (46%)
Vps13bNP_001128358.1 Chorein_N 3..94 CDD:289396 55/90 (61%)
SHR-BD <2606..>2686 CDD:284143 18/88 (20%)
VPS13_C 3559..3705 CDD:293514 74/145 (51%)
ATG_C 3707..3811 CDD:286423 45/103 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D51820at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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