DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13B and Vps13a

DIOPT Version :9

Sequence 1:NP_651753.2 Gene:Vps13B / 43550 FlyBaseID:FBgn0039727 Length:3731 Species:Drosophila melanogaster
Sequence 2:NP_766616.2 Gene:Vps13a / 271564 MGIID:2444304 Length:3166 Species:Mus musculus


Alignment Length:4045 Identity:710/4045 - (17%)
Similarity:1320/4045 - (32%) Gaps:1396/4045 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELSI 69
            ||.:..:|..::..||.|..:....:.:|:|.|..:||.::...| .||::|.::..|||..|.:
Mouse     4 ESVVVEVLNRFLGDYVVNLDESQLSLGIWKGAVALKNLVIKENAL-HELDVPFKVKVGHIGSLKL 67

  Fly    70 LVPWTKLMSEPVKIVINTIEFVAKLPDS--------ESKQRRASFQREQRR----KSKRESVEQP 122
            .:||..|.::||:.|:..| |:..:|.|        |.||...:.|:|.:|    |.|....|:|
Mouse    68 KIPWKNLYTQPVEAVLEEI-FLLIVPSSRIQYDPIKEEKQLMETKQQELKRIEKAKQKVFDKEKP 131

  Fly   123 DQTKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIV-------VSMNVQTLNFSSAGEDWKP 180
            .:.|.  ...:..:|.:||.|:.:|..:|.::| ||||.       ..:::|.::..:..:.|.|
Mouse   132 REEKQ--DTFTEKLVTQIIQNLQVQISSIHIRY-EDDITNGDKPLSFGISLQNISLQTTDQYWIP 193

  Fly   181 TMVDIHPVSVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTST 245
            .:.|  ....::|||:::.:|.                  ..:....|...|..|:    .:...
Mouse   194 CLHD--NTEKLVRKLIRLDNLF------------------AYWNVNSEMFYLNDYD----ESLKA 234

  Fly   246 TRIGVFTKSLDINVSSLQFPMVMRLVKMLLELKPAEFED-DPQNPEDQEAVAEGSESQQGTESAG 309
            .:.|:..:    |:....:..|.|.:....:|:.....| |..:|:...||              
Mouse   235 LKNGIVNE----NIVPEGYDFVFRPISASAKLQMNRRSDFDFSDPKINLAV-------------- 281

  Fly   310 RSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGVYAEELNFQLKNSEYFTDQSMGGIKRIRYTP 374
                          |....:...:.|  ..|.|....|.::...:|..|           .::.|
Mouse   282 --------------DLHTIAIEFNKP--QYFSLMELLESIDMMTQNQPY-----------RKFKP 319

  Fly   375 ILRISLGG----LYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDRNLVNTQEFQQERSF 435
            .:.:.|..    .|...:||:    .||...|.....|.:..:|            .:.::.|.|
Mouse   320 SVPLHLHAKEWWAYAIHSILE----VNVCPSLRMWSWEHIRNHR------------YKMKRYREF 368

  Fly   436 IDKSLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRD 500
            ..|.|..:                                           |||  |.....|.:
Mouse   369 YKKKLTSK-------------------------------------------KPS--PEILMSLEE 388

  Fly   501 LGVRIQYRLLSAGITFHFSQSFVQVKKVISDLIRPYDYPGYRSESMKDEDRGVPEPENKNSEMTI 565
            |    :..|....||....|:.|:.||.           ||     |....||.:||        
Mouse   389 L----EKTLDVFNITIARQQAEVEAKKA-----------GY-----KIYKEGVKDPE-------- 425

  Fly   566 PDLEYLMGLVPTCNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSLLPYLQLKISLVEGT 630
             |.....|.:.|.:          :....||||....|.:..||...:..|...:....:.|:.|
Mouse   426 -DNAGWFGWLWTWS----------ESNANQQQDVKPGILEEMLTPEEKSLLYEAIGYSETAVDPT 479

  Fly   631 MCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKNLALMIMNTTPDNGRAKLLNIPRVQVNW 695
            :......::                      |..::|::::::                      
Mouse   480 LPKTFEALK----------------------FFVHLKSMSIVL---------------------- 500

  Fly   696 NRLLAPHLWRQNEAPLETSEIKSEIITLEFSKRELIIAKRLVPLISSFSGQDLCD---LAHIVAN 757
                     |:|....|...:..|.::....:|....|.:....|.||....|.|   ..|::::
Mouse   501 ---------RENHQKPELLNVVVEGLSTSVVQRPGAQAIKFETKIDSFHITGLPDDFKKPHLLSS 556

  Fly   758 VNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNIRNVVLSTSKNADNKWLE 822
            ::   |...||                                         ::...|..|:.:.
Mouse   557 LD---DTSLLQ-----------------------------------------ITFEINPLNETVA 577

  Fly   823 MQCQF---PLEEVHSEQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGRQITKDKE----VE 880
            .:|..   |||.::..:     ||..: :|.||...|::|.|..:.:      :||.:|    ..
Mouse   578 QRCTIEAEPLEIIYDAR-----TVNSI-VEFFRPPKDVHLAQLTSVT------LTKLEEFRAKTA 630

  Fly   881 TDLESVNQSEPPITQSVSNYSTISASAIAFNDFQPRRISRNNSRKISVPEETVHLSSERDERHTQ 945
            |.|..|.:::..:...::    :.||.:..                                   
Mouse   631 TGLLYVIETQKVLDLRIN----VKASYVIV----------------------------------- 656

  Fly   946 AEPLTIPVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKI---------DV------CEVMMRKT 995
                       ||..||..       |..::|:::...|:         ||      .|.:|.:.
Mouse   657 -----------PQYGNFSP-------TSNLLLLDLGHLKVSSKRRSLLPDVRPSEASLEDIMHRA 703

  Fly   996 PGHTDVEYTSIRLPHMKVKSGNCEAIQRGNIRGVIPVASNTELLNWVFDLNEFNVCYRRANV-TE 1059
            ....|::.|||:|.:.:|.....||                                |:.|| |:
Mouse   704 YDSFDIQLTSIQLLYSRVGDNWKEA--------------------------------RKLNVSTQ 736

  Fly  1060 MIIAPVRTTITLALSFKTSD------KVDGSKGKEDKCANTCSINVHVDMSAINIFAQRVKLLHE 1118
            .|:.|:...:.|:.:....|      |:.|.                :.:.::.|..::::.:.|
Mouse   737 HILIPMHVNVELSKAMVFMDIKMPKFKISGK----------------LPLVSLRISDKKLQGIME 785

  Fly  1119 HCLIISKMYGSLCPDE-------PASKWQ-----------TGKMKPRLEVYTGSAQNYPVIKEFL 1165
                   :.||:...|       ||..:|           :.|:.|.||        .||.::..
Mouse   786 -------LLGSIPKPEPVTDVSAPARSFQIQASALPVSHISQKLIPLLE--------QPVTEDDS 835

  Fly  1166 ELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSK--IVMSLEDLLLNIDKHSDFN 1228
            | :..|:||       .|.:..|    |::|...:.:...|..|  .||:|..|.:..:      
Mouse   836 E-EEFFDAP-------CSPLEEC----PQVSCRDKCTRQKKLQKKDCVMNLIQLRMRFE------ 882

  Fly  1229 KITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLPLISV---------------VITTVSL 1278
                 :....:.:|.               ::|| ..||::.:               :..:..|
Mouse   883 -----VAEVSIQFYH---------------LVGD-CELPVLEMGALGLGTEAEFRTFDLKGSAFL 926

  Fly  1279 EDLYAKIGARNPHNKQHTISEVLIEVQPIEMVLNLDQITEFMVPICEVLEIIGNSASAQSANKPS 1343
            ::|:.|.......||           :|:.::..||...|.::    .||.:....:|.:.|   
Mouse   927 KELWLKCPEYLDENK-----------KPVYLITTLDNTMEDLL----TLEFMKVEKNAPNLN--- 973

  Fly  1344 APVPSKITTVQDLPMVHLNSKGIYVYLPLSTGKKSCSVLLLRIESIQLTPSLENPLVRQLVRPDI 1408
                |....|..|..|:.:|..|:                |..|::..|.:..|.::     |::
Mouse   974 ----STYNNVLQLIKVNFSSLDIH----------------LHTEALLNTMNYLNNIL-----PEL 1013

  Fly  1409 YQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASKHDNPAFEWNNQSQS 1473
            .:|:|     |...|..||:             |:        |.|.||.|  .|..|       
Mouse  1014 REKSA-----SVSAAEPEDK-------------GD--------IIKKLALK--LPTNE------- 1043

  Fly  1474 TELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCATDFVASLNTHQISLISCIIVRAQRLG 1538
             ::..:::..:...:.|:.            |..:.|.:...:..|::..|            :.
Mouse  1044 -DIITLQLLAELSCLQIFI------------QDQKQNISEIKIEGLDSEMI------------MK 1083

  Fly  1539 CIIDQVCVKNAELPKARSHKTLGNISKYNSVDNSIYFPADPKVFKKDTWIPKSSKKLVS-ERLSY 1602
            .::.::..|            |.||...:|...:||        ||..:|  :.|::.| :.:||
Mouse  1084 PLVTEINAK------------LRNIIVLDSDKMAIY--------KKALYI--TGKEVFSFKMISY 1126

  Fly  1603 TNAST--SFTDAKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSF 1665
            .:|:.  ::||..          ..|..:||                              :|..
Mouse  1127 MDATAGYAYTDMS----------VVDIRVHL------------------------------TVGC 1151

  Fly  1666 VAGIFVLK-IYDVLELEELERPVMKPLFLMTVSQPSFMSTQNFKAAVTQASIFNVNISVAKADV- 1728
            :..:|:.| :|.:|...:..:.|...|...|| |.:.|:....|....::|.|.::::: ||.| 
Mouse  1152 IEVVFITKFLYSILAFIDNFQAVKDALAEATV-QAAEMAADGVKELARKSSRFALDVNI-KAPVV 1214

  Fly  1729 ---DGKVDSERF--------NESVFATLPGQLGSSGIPP--PLLTIKTQYDRLHQ--------KE 1772
               ...|....|        .:::|.|:...  .|.|||  .|:|||....||::        :|
Mouse  1215 LIPQSPVSQNVFVADFGLITMKNIFVTVTET--QSNIPPVIDLITIKLSKMRLYRSQFRNDTYQE 1277

  Fly  1773 VDVELRKPILLRICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNADRF 1837
            | ::|..|:.|.:...  :.|:.:.::      |.||||::        :||:.::        |
Mouse  1278 V-LDLLLPLNLEVIVE--RNLSWEWYK------EVPCFNIK--------AQLKPME--------F 1317

  Fly  1838 HLSCDRITAKFYDEERSYKCSFVWLDVSTRIKFSSRPQKAVIRSNIGS------FYVQSGEKMLL 1896
            .||.:.:|..|.....:     :|.........|:......:.|.:.|      ..|.:...:.:
Mouse  1318 ILSQEDLTTVFQTLHGN-----IWYGQDLSAPSSANKDPETMTSGVTSPPDHSPATVVTAAVVEV 1377

  Fly  1897 HPLLMRLSVDLVSEPWSEELLVNATLKLNYLHIDAGVFSILQLQKAQQGVNRIREYADREWQQFL 1961
            ||           :......::|.:.:.:||     ..::......:.....:|:          
Mouse  1378 HP-----------QASQAHTMLNVSFQTDYL-----TMALYSPGPDEASFTDVRD---------- 1416

  Fly  1962 RSRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLN-------SE 2019
                                 ||.|..|.....:.|:.:.|.||  :..|.|...|       |.
Mouse  1417 ---------------------PSLELAEFKLENIISSLKIYTDD--STVFSFSVKNCILDDKRSH 1458

  Fly  2020 SVLPMPYQVQII----KKNYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEY-FSETHET 2079
            .:...|..:.:.    ||:...|.:|        .|..:.|...|.:.:::...:|: .:..|..
Mouse  1459 VMKATPRMIGLTVGFDKKDMVDIKYR--------KIKTFVVTDAVVQEMYVCASVEFLMTVAHIF 1515

  Fly  2080 FLHYCDFMLSETSTKQLTPPDRPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEYLQSDFKVD 2144
            |..|......|||.:..|..:.|                                   ..:....
Mouse  1516 FDAYMTSTALETSVQTRTTREAP-----------------------------------AQELGKW 1545

  Fly  2145 ENNDFILHPKVLVGCMRIDTVFRAE----KVPKL----QLLLCCQDIELNFVNQTDNTGELPKQL 2201
            |.|..|.:|::         ||.|:    ..|.|    |..:||:.      ..|.||       
Mouse  1546 EMNILIKNPEI---------VFVADMTRNDAPALVITTQCEICCKG------EPTSNT------- 1588

  Fly  2202 NKYRLRQTPNITQTFLTVHVEDLQMHSRIYSRNDFSLQTEMRARVKCLDYGFLNMLDVLEPMKFS 2266
                           :|..::|||:.:..:      |..:.:.:|          ..||:|... 
Mouse  1589 ---------------VTAAIKDLQVRACPF------LPVKRKGKV----------TTVLQPCDL- 1621

  Fly  2267 SYVRLTDYPRSLVQANFLVDKLRLNCGPHVIHTLL---SSKYHWQEVL------------QQKDV 2316
             :.:.|...|.....:..|..|.|...|.:|:|::   |:.|..:|.:            .:||.
Mouse  1622 -FYQATQLGRDPQMIDISVKSLTLKVSPVIINTIITITSALYTTKETVPEENTSNIAHLWDKKDT 1685

  Fly  2317 RHVLM---------PKLVIVNRIQTPISFGQT------------------NTVEKIPVN---PGE 2351
            :::.|         .|:|..|.:   :..|:|                  .||..:...   .||
Mouse  1686 KNLKMWFLEESNESEKVVPTNEV---MPGGETLNLRIDSIFIVLEAGIGHRTVPMLLAKACFSGE 1747

  Fly  2352 -------VQLY-HFRSCSHVQELTFFITNP--KTLLVDSSD-----SVHIALK-------FEDEE 2394
                   :.|: |.....|.....|.:..|  :.|.:|.:|     ::.|.:|       .|.:.
Mouse  1748 SKNWLSLINLHCHLELEVHYYNEMFGVWEPLLEPLEIDQTDDFRPWNLGIKMKKKAKEAIVESDS 1812

  Fly  2395 KIHNLRVGEY----------CITLKLAKLSTTQIYILVKGQIE---------LVSMVPFNLVTEF 2440
            :..|.:|.||          .:.:.|:|.....:..||:...|         |..:.||.:....
Mouse  1813 EAENYKVPEYKTAISFYSRDQLNITLSKCGLVMLNNLVEAFTEAATGSSSVFLRDLAPFMIFNSL 1877

  Fly  2441 --------------------REEEINYDESTPPEHLLLSKERSSYYQNVKRNADINMRLKLTAGL 2485
                                :..|:..|||       ||.:    |...|.|...|....|::.|
Mouse  1878 GLTVSVSPSDSFSVLNVPLAKSYELKNDES-------LSMD----YVRTKDNDHFNAMTSLSSKL 1931

  Fly  2486 GRGRTGDIPLKTNNNLPWLVKVP-TQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIF 2549
                  ...|.|..|.....|:| |:..::..::..|....:..:....:..:..|.:....|: 
Mouse  1932 ------FFILLTPANHSVADKIPLTKVGRRLYTVRHRESGVERSIICQIDTVEGSKKVTIRSPV- 1989

  Fly  2550 EICNMLSCAVKATESTTGESSTIEAMGGRWALNTATTHATEHNIGF-TFSGILRGSSKDEYSLML 2613
            :|.|..|..:...|..|             .|..|:.. .|.||.. ::...|....:|:...:.
Mouse  1990 QIKNHFSIPISVFEGDT-------------LLGIASPE-NEFNIPLASYRSSLSLVPEDQDYQLC 2040

  Fly  2614 RTMDWHKFFYYDPTVWTIENALHKLGKS---SKRKWPLN-DPEELRVSRVLDF-ENAFDVKYQTK 2673
            ..:|:.:...||..:      |.|..:|   ||:.:.:| .||:..::.:..: |:.:|:.|.  
Mouse  2041 EGIDFEEIIKYDGQL------LKKKCRSTNPSKKSFVINIVPEKDNLASLSVYSEDGWDLPYV-- 2097

  Fly  2674 ATREFSCCQGLDVTAW-------------GMFING---------TGLYVAIFMIQ-EQARLDLKA 2715
                        :..|             ..:|.|         .|....|:.:: :||:|.|| 
Mouse  2098 ------------LHLWPPILIRNLLPYKVAYYIEGIENTVVTLSEGHSSQIYNVEMDQAKLHLK- 2149

  Fly  2716 NSLQMMPKL----KSAFTI-----DVRFDNGWKSSTPICLEDFTQKSSSNAGRSLYLRYNSFVDI 2771
                ::..|    ||.|.|     |:.|.|.      .||   |:...|:...::::.||:...:
Mouse  2150 ----LLDYLNHDWKSEFYIRSSQQDINFINF------TCL---TEMEKSDLDIAIHMTYNTGQTV 2201

  Fly  2772 V-------IVERDEVLRLILEYRQEDDGRR---------LFKLRSKFVFTNFTDVVLNALTLAMD 2820
            |       :|.:   ...:|:|:.:...|:         ||..:....|.|      |.:.|.:.
Mouse  2202 VAFHSPYWMVNK---TNRMLQYKADGIHRKHPPNYTKPVLFSFQPNHFFNN------NKVQLMVT 2257

  Fly  2821 HKENSTREEVEAYSICKKARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYFVCFSV-- 2883
            ..|.|.:..::.          |.|.....|.|..|:....:..:.:..|. |..|.|:.|.:  
Mouse  2258 DSELSDQFSIDT----------VGSHGAIRCKGLKMEYQVGVTINLSSFNI-TRIVTFIPFYMIK 2311

  Fly  2884 ------------GGSREISIPIPLAVPFTRRCFSLQAGPESIPLMITLIEKDNVHYLNVFRDTAP 2936
                        |..:.:|:.:..::||         .||:         ..|:..:.|.|...|
Mouse  2312 NKSKYHISVAEEGSDKWLSLDLEQSIPF---------WPEN---------ASNILLIQVERSEDP 2358

  Fly  2937 -----------AIVISNNTNVKFIVAQTSASENSNVSCTNSEFVGRNFEWNQLVLPHSNCYYTPP 2990
                       .|::..|..:..|:|:.:.:|:|.| .|.|::  .:.....|::.|:.   :.|
Mouse  2359 PKRIYFNKQDNCILLRLNNELGGIIAEVNLAEHSTV-ITFSDY--HDGAATFLLINHTK---SDP 2417

  Fly  2991 QMYANFPDVEFTMCNLSLAVYKDKLCAKNKI--AWSKPIRTDK-SW---QKFLHVPHHGDVKVVV 3049
            ..|.          ..||...:|.|.....:  .|:.|:.:.| .|   |.:..|.|..|:...:
Mouse  2418 VQYN----------QSSLGEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSYGEVTHKDDMMTPI 2472

  Fly  3050 CDKHRAIRLNIYYIAQQ-----------LEFSVKDLRSRLTKPENVLMPSQEQAAPRPDESSEQE 3103
            ....:.|.|..::...|           .:.:.:..::.|.:.| |::..|:......:..::||
Mouse  2473 SVGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAELE-VVLALQDVGISLVNNYTKQE 2536

  Fly  3104 NDTKRVTLPNMVTCAHFNEECESKTQTRIKIFIKSFVFSLQTDNRE-------NDFVKTEVCNI- 3160
            .....:|..::|.      |.:.|.:.|.|.........|:.:.||       .|.| .|:.|| 
Mouse  2537 VAYIGITSSDVVW------EAKPKKKARWKPMSVKHTEKLEKEFREYTEASPLEDKV-VELDNIP 2594

  Fly  3161 -----------------------YADDSMLIYDDDDDQRELRLQLPNLQVDNQLYSSGKYDFPVL 3202
                                   |.....:.|:....|...|:|:..:|:.||::.:   .||.:
Mouse  2595 VRLTPSGNDMKILQPHVIPVRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGA---IFPFV 2656

  Fly  3203 LCAEKLYRRNC--SLPQVYDLDHVYKQQAQRTPVSLFTFIFYQDEMQLQNVRCQIPPFRVYIED- 3264
            ....|..|...  |.|:.:....:..:.|..:.:|                  :|..|:|.|:: 
Mouse  2657 FYPIKPPRSVTMDSAPKPFTDVSIVMRSAGHSQIS------------------RIKYFKVLIQEM 2703

  Fly  3265 ------AYLNQLLEALVECEPSNCV----YSPPVEQDQILLPAGMTLLPDQVVAQSLYISEPLRL 3319
                  .::..|.:.:.:.|.:...    :...||..:          .:..|..|:..|:....
Mouse  2704 DLSLDLGFVYALADLVTKAEVTEKTEVEHFHKDVEAFE----------QEYEVVSSVDQSQVNLF 2758

  Fly  3320 NSFTVEPLNLLLSVHTSSRLYIALD----------HS--------------------PLSFSRYE 3354
            ..|.:.|:.|.|||..||....|.|          ||                    .|:|....
Mouse  2759 EYFHISPIKLHLSVSLSSGRDEAKDSEQHGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELN 2823

  Fly  3355 RQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRG 3419
            .|...|..|:  ..:..||...||.....::..|::||:|.||.|.||.|:..|...|.||..:|
Mouse  2824 YQFHTTSELQ--SEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQG 2886

  Fly  3420 PWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGFADG 3484
            |..|:.|:..|..:|:.....|...:.:|:..::|:.:..:|:|.::.:........:|.|..:|
Mouse  2887 PEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLREG 2951

  Fly  3485 LTQGLTGLGISLLGAVGGLAHHTL---EARSSVGVIAGLTKGIVGALTKPISGAAEMLALTGQGV 3546
            :|:|..||....:..:.|:....:   :...:.|...|:.||:|||:|:|..|..:|.:.|.||:
Mouse  2952 ITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMASSTFQGI 3016

  Fly  3547 LHTVGFNAMPQQVEPSFIRNVALHGSSNRIWSYLPEELSRDQML------------FFSEIMLQI 3599
            ......:.:.....|.|.....:      |..|...:.|.:|||            :|:.:|:..
Mouse  3017 KRATETSEVESLRPPRFFNEDGV------IRPYRLRDGSGNQMLQVMENGRFAKYKYFTHVMINK 3075

  Fly  3600 STQL---RPALLFLT 3611
            :...   |..:||:|
Mouse  3076 TDMFMITRRGVLFVT 3090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13BNP_651753.2 Chorein_N 5..117 CDD:289396 37/123 (30%)
VPS13_C 3319..3468 CDD:293514 46/178 (26%)
ATG_C 3473..3546 CDD:286423 21/75 (28%)
Vps13aNP_766616.2 MRS6 4..>2005 CDD:227376 474/2809 (17%)
Chorein_N 4..113 CDD:289396 32/110 (29%)
VPS13 142..371 CDD:293513 51/314 (16%)
TPR 1. /evidence=ECO:0000255 212..245 6/58 (10%)
TPR 2. /evidence=ECO:0000255 373..406 11/81 (14%)
VPS13_mid_rpt 568..791 CDD:293515 55/346 (16%)
FFAT. /evidence=ECO:0000250|UniProtKB:Q96RL7 838..844 3/12 (25%)
VPS13_mid_rpt 1141..>1236 CDD:293515 22/126 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1343..1365 3/21 (14%)
TPR 3. /evidence=ECO:0000255 1806..1840 6/33 (18%)
TPR 4. /evidence=ECO:0000255 1999..2034 8/48 (17%)
SHR-BD 2202..2445 CDD:284143 51/296 (17%)
Required for mitochondrial localization. /evidence=ECO:0000250|UniProtKB:Q96RL7 2607..3166 109/523 (21%)
VPS13_C 2758..2935 CDD:293514 46/178 (26%)
ATG_C 2938..3017 CDD:286423 22/78 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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