Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_766616.2 | Gene: | Vps13a / 271564 | MGIID: | 2444304 | Length: | 3166 | Species: | Mus musculus |
Alignment Length: | 4045 | Identity: | 710/4045 - (17%) |
---|---|---|---|
Similarity: | 1320/4045 - (32%) | Gaps: | 1396/4045 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELSI 69
Fly 70 LVPWTKLMSEPVKIVINTIEFVAKLPDS--------ESKQRRASFQREQRR----KSKRESVEQP 122
Fly 123 DQTKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIV-------VSMNVQTLNFSSAGEDWKP 180
Fly 181 TMVDIHPVSVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTST 245
Fly 246 TRIGVFTKSLDINVSSLQFPMVMRLVKMLLELKPAEFED-DPQNPEDQEAVAEGSESQQGTESAG 309
Fly 310 RSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGVYAEELNFQLKNSEYFTDQSMGGIKRIRYTP 374
Fly 375 ILRISLGG----LYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDRNLVNTQEFQQERSF 435
Fly 436 IDKSLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRD 500
Fly 501 LGVRIQYRLLSAGITFHFSQSFVQVKKVISDLIRPYDYPGYRSESMKDEDRGVPEPENKNSEMTI 565
Fly 566 PDLEYLMGLVPTCNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSLLPYLQLKISLVEGT 630
Fly 631 MCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKNLALMIMNTTPDNGRAKLLNIPRVQVNW 695
Fly 696 NRLLAPHLWRQNEAPLETSEIKSEIITLEFSKRELIIAKRLVPLISSFSGQDLCD---LAHIVAN 757
Fly 758 VNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNIRNVVLSTSKNADNKWLE 822
Fly 823 MQCQF---PLEEVHSEQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGRQITKDKE----VE 880
Fly 881 TDLESVNQSEPPITQSVSNYSTISASAIAFNDFQPRRISRNNSRKISVPEETVHLSSERDERHTQ 945
Fly 946 AEPLTIPVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKI---------DV------CEVMMRKT 995
Fly 996 PGHTDVEYTSIRLPHMKVKSGNCEAIQRGNIRGVIPVASNTELLNWVFDLNEFNVCYRRANV-TE 1059
Fly 1060 MIIAPVRTTITLALSFKTSD------KVDGSKGKEDKCANTCSINVHVDMSAINIFAQRVKLLHE 1118
Fly 1119 HCLIISKMYGSLCPDE-------PASKWQ-----------TGKMKPRLEVYTGSAQNYPVIKEFL 1165
Fly 1166 ELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSK--IVMSLEDLLLNIDKHSDFN 1228
Fly 1229 KITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLPLISV---------------VITTVSL 1278
Fly 1279 EDLYAKIGARNPHNKQHTISEVLIEVQPIEMVLNLDQITEFMVPICEVLEIIGNSASAQSANKPS 1343
Fly 1344 APVPSKITTVQDLPMVHLNSKGIYVYLPLSTGKKSCSVLLLRIESIQLTPSLENPLVRQLVRPDI 1408
Fly 1409 YQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASKHDNPAFEWNNQSQS 1473
Fly 1474 TELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCATDFVASLNTHQISLISCIIVRAQRLG 1538
Fly 1539 CIIDQVCVKNAELPKARSHKTLGNISKYNSVDNSIYFPADPKVFKKDTWIPKSSKKLVS-ERLSY 1602
Fly 1603 TNAST--SFTDAKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSF 1665
Fly 1666 VAGIFVLK-IYDVLELEELERPVMKPLFLMTVSQPSFMSTQNFKAAVTQASIFNVNISVAKADV- 1728
Fly 1729 ---DGKVDSERF--------NESVFATLPGQLGSSGIPP--PLLTIKTQYDRLHQ--------KE 1772
Fly 1773 VDVELRKPILLRICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNADRF 1837
Fly 1838 HLSCDRITAKFYDEERSYKCSFVWLDVSTRIKFSSRPQKAVIRSNIGS------FYVQSGEKMLL 1896
Fly 1897 HPLLMRLSVDLVSEPWSEELLVNATLKLNYLHIDAGVFSILQLQKAQQGVNRIREYADREWQQFL 1961
Fly 1962 RSRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLN-------SE 2019
Fly 2020 SVLPMPYQVQII----KKNYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEY-FSETHET 2079
Fly 2080 FLHYCDFMLSETSTKQLTPPDRPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEYLQSDFKVD 2144
Fly 2145 ENNDFILHPKVLVGCMRIDTVFRAE----KVPKL----QLLLCCQDIELNFVNQTDNTGELPKQL 2201
Fly 2202 NKYRLRQTPNITQTFLTVHVEDLQMHSRIYSRNDFSLQTEMRARVKCLDYGFLNMLDVLEPMKFS 2266
Fly 2267 SYVRLTDYPRSLVQANFLVDKLRLNCGPHVIHTLL---SSKYHWQEVL------------QQKDV 2316
Fly 2317 RHVLM---------PKLVIVNRIQTPISFGQT------------------NTVEKIPVN---PGE 2351
Fly 2352 -------VQLY-HFRSCSHVQELTFFITNP--KTLLVDSSD-----SVHIALK-------FEDEE 2394
Fly 2395 KIHNLRVGEY----------CITLKLAKLSTTQIYILVKGQIE---------LVSMVPFNLVTEF 2440
Fly 2441 --------------------REEEINYDESTPPEHLLLSKERSSYYQNVKRNADINMRLKLTAGL 2485
Fly 2486 GRGRTGDIPLKTNNNLPWLVKVP-TQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIF 2549
Fly 2550 EICNMLSCAVKATESTTGESSTIEAMGGRWALNTATTHATEHNIGF-TFSGILRGSSKDEYSLML 2613
Fly 2614 RTMDWHKFFYYDPTVWTIENALHKLGKS---SKRKWPLN-DPEELRVSRVLDF-ENAFDVKYQTK 2673
Fly 2674 ATREFSCCQGLDVTAW-------------GMFING---------TGLYVAIFMIQ-EQARLDLKA 2715
Fly 2716 NSLQMMPKL----KSAFTI-----DVRFDNGWKSSTPICLEDFTQKSSSNAGRSLYLRYNSFVDI 2771
Fly 2772 V-------IVERDEVLRLILEYRQEDDGRR---------LFKLRSKFVFTNFTDVVLNALTLAMD 2820
Fly 2821 HKENSTREEVEAYSICKKARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYFVCFSV-- 2883
Fly 2884 ------------GGSREISIPIPLAVPFTRRCFSLQAGPESIPLMITLIEKDNVHYLNVFRDTAP 2936
Fly 2937 -----------AIVISNNTNVKFIVAQTSASENSNVSCTNSEFVGRNFEWNQLVLPHSNCYYTPP 2990
Fly 2991 QMYANFPDVEFTMCNLSLAVYKDKLCAKNKI--AWSKPIRTDK-SW---QKFLHVPHHGDVKVVV 3049
Fly 3050 CDKHRAIRLNIYYIAQQ-----------LEFSVKDLRSRLTKPENVLMPSQEQAAPRPDESSEQE 3103
Fly 3104 NDTKRVTLPNMVTCAHFNEECESKTQTRIKIFIKSFVFSLQTDNRE-------NDFVKTEVCNI- 3160
Fly 3161 -----------------------YADDSMLIYDDDDDQRELRLQLPNLQVDNQLYSSGKYDFPVL 3202
Fly 3203 LCAEKLYRRNC--SLPQVYDLDHVYKQQAQRTPVSLFTFIFYQDEMQLQNVRCQIPPFRVYIED- 3264
Fly 3265 ------AYLNQLLEALVECEPSNCV----YSPPVEQDQILLPAGMTLLPDQVVAQSLYISEPLRL 3319
Fly 3320 NSFTVEPLNLLLSVHTSSRLYIALD----------HS--------------------PLSFSRYE 3354
Fly 3355 RQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRG 3419
Fly 3420 PWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGFADG 3484
Fly 3485 LTQGLTGLGISLLGAVGGLAHHTL---EARSSVGVIAGLTKGIVGALTKPISGAAEMLALTGQGV 3546
Fly 3547 LHTVGFNAMPQQVEPSFIRNVALHGSSNRIWSYLPEELSRDQML------------FFSEIMLQI 3599
Fly 3600 STQL---RPALLFLT 3611 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 37/123 (30%) |
VPS13_C | 3319..3468 | CDD:293514 | 46/178 (26%) | ||
ATG_C | 3473..3546 | CDD:286423 | 21/75 (28%) | ||
Vps13a | NP_766616.2 | MRS6 | 4..>2005 | CDD:227376 | 474/2809 (17%) |
Chorein_N | 4..113 | CDD:289396 | 32/110 (29%) | ||
VPS13 | 142..371 | CDD:293513 | 51/314 (16%) | ||
TPR 1. /evidence=ECO:0000255 | 212..245 | 6/58 (10%) | |||
TPR 2. /evidence=ECO:0000255 | 373..406 | 11/81 (14%) | |||
VPS13_mid_rpt | 568..791 | CDD:293515 | 55/346 (16%) | ||
FFAT. /evidence=ECO:0000250|UniProtKB:Q96RL7 | 838..844 | 3/12 (25%) | |||
VPS13_mid_rpt | 1141..>1236 | CDD:293515 | 22/126 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1343..1365 | 3/21 (14%) | |||
TPR 3. /evidence=ECO:0000255 | 1806..1840 | 6/33 (18%) | |||
TPR 4. /evidence=ECO:0000255 | 1999..2034 | 8/48 (17%) | |||
SHR-BD | 2202..2445 | CDD:284143 | 51/296 (17%) | ||
Required for mitochondrial localization. /evidence=ECO:0000250|UniProtKB:Q96RL7 | 2607..3166 | 109/523 (21%) | |||
VPS13_C | 2758..2935 | CDD:293514 | 46/178 (26%) | ||
ATG_C | 2938..3017 | CDD:286423 | 22/78 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |