Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_596800.2 | Gene: | vps1302 / 2540138 | PomBaseID: | SPBC16C6.02c | Length: | 3004 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 4058 | Identity: | 704/4058 - (17%) |
---|---|---|---|
Similarity: | 1281/4058 - (31%) | Gaps: | 1498/4058 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIEFVAKLPDS-------------ESKQRRASFQREQRRKSKRESVE 120
Fly 121 QPDQTKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIVVS----------MNVQTLNFSSAG 175
Fly 176 EDWKPTMVDIHPVSVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTV 240
Fly 241 STTSTTRIGVF------------TKSLDINVSSLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQE 293
Fly 294 AVAEGSESQQGTESAGRSVFWWAWSLLPSFDTEAPSS--SCDTPTGHAFDLGVYAEELNFQLKNS 356
Fly 357 EYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDR 421
Fly 422 NLVNTQEFQQERSFIDKSLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVP 486
Fly 487 KPSSHPVAESQLRDLGVRIQYRLLSAGITFHFSQSFVQVKKVISDLIRPYDYPGYRSESMKDEDR 551
Fly 552 GVPEPENKNSEMTIPDLEYLMGLVPTCNYKIELRNIVVQLYPRQQ-------------QDESSAI 603
Fly 604 NQHQLTTTVRQSLLPYLQLKISLVEGTMCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKN 668
Fly 669 LALMIMNTTPDNGRAKLLNIPRVQVNWNRLLAPHLWRQNEAPLETSEIKSEIITLEFSKRELIIA 733
Fly 734 KRLVPLISSFSGQDLCDLAHIVANVNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDA 798
Fly 799 VHTKMNIRNVVLSTSKNADNKWLEMQCQ--FPLEEVHSEQEKIPGTVVCLWLEPFRITTDIYLL- 860
Fly 861 -----QFLNFSDNSGRQITK-DKEVETDLES-----------------VN-QSEPPI---TQSVS 898
Fly 899 NYSTISASAIA-FNDFQPRRISRNNSRKISVPEETVHLSSERDERHTQAEPLTI-PVANKPQPSN 961
Fly 962 FDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRKTPGHTDVEYTSIRLP---HMKVKSGNCEAIQR 1023
Fly 1024 GNIRGVIPVASNTELLNWVFDLNEFNVCYRRANVTEMIIAPVRTTITLALSFKTSDKVDGSKGKE 1088
Fly 1089 DKCANTCSINVHVDMSAINIFAQRVKLLHEHCLIISKMYGSLCPDEPASKWQTGKMKPRLEVYTG 1153
Fly 1154 SAQNYPVIKEFLELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSKIVMSLEDLL 1218
Fly 1219 LNIDKHSDFNKITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLPLISVVITTVSLEDLYA 1283
Fly 1284 --KIGARNPHNKQHTISEVLIEVQPIEMVLNLDQITEFMVPIC-------------EVLEIIGNS 1333
Fly 1334 ASAQSANKPSAPVPSKITTVQDLPMVHLNSKGIYVYLPLSTGKKSCSVLLLRIESIQLTPSLEN- 1397
Fly 1398 PLVRQLVRPDIYQKAAELNMLSTPG-ALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASKHD 1461
Fly 1462 ------------------NPAFEWNNQSQS-TELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSV 1507
Fly 1508 EYNCATDFVASLNTHQISLISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNISKYNSVDNS 1572
Fly 1573 IY-FPAD------------PKVF--KKDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSDYFYGS 1622
Fly 1623 CQSDSGIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSFVA-----GIFVLKIYDVLELEE 1682
Fly 1683 LERPVMKPLFLMTVSQPSFMSTQN-FKAAVTQASIF-----------NVNISVAKADVDGKVD-- 1733
Fly 1734 --------SERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLHQKEVDVELRKPILLRICENTI 1790
Fly 1791 KQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNAD-------------RFHLSCD 1842
Fly 1843 RITAKFY--------------DEERSYKC-SFVWL---------DVSTRIKFSSRPQKAVI---- 1879
Fly 1880 -RSNIGSFYVQSGEKMLLHPLLMRLSVDLVS--------------------------EPWSEELL 1917
Fly 1918 VNATLKLNYLHIDAGVFSILQLQK-AQQGVNRIREYADRE------------WQQFLRSRPVLGT 1969
Fly 1970 -PKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLNSESVLPMPYQVQIIKK 2033
Fly 2034 NYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEYFSETHETFLHYCDFMLSETSTKQLTP 2098
Fly 2099 PDRPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEYLQSDFKVDENNDFILHPKVLVGCMRID 2163
Fly 2164 TVFRAEKVPKLQLLLCCQDIELNFVNQTDNTGELPKQLNKYRLRQTP-NITQTFLTVHVEDLQMH 2227
Fly 2228 SRIYSRNDFSLQTEMRARVKCLDYGFLNMLDVLEPMKFSSYVRLTDYPRSLVQANFLVDKLRLNC 2292
Fly 2293 GPHVIHTLLSSKYHWQEVLQQKDVRHVLMPKLVIVNRIQTPISFGQT-NTVEKIPVNPGEVQLYH 2356
Fly 2357 FRSCSHVQELTFFITNPKTLLVDSSDSVHIALKFEDEEKIHNLRVGEYCITLKLAKLSTTQIYIL 2421
Fly 2422 VKGQIELVSMVPFNLVTEFREE-EINYDESTPPEHLLLSKERSSYYQNVKRNADINMRLKLTAGL 2485
Fly 2486 GRGRTGDIPLKTNNNLPWLVKVPTQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIFE 2550
Fly 2551 ICNMLSCAVKATESTTGESSTIEAMGGRWALNTATTHATEHNIGFTFSGILRGSSKDEYS-LMLR 2614
Fly 2615 TMDWHKFFYYDPTVWTIENALHKLGKSSKRKWPLNDPEELRVSRVLDFENAFDVKYQTKATREFS 2679
Fly 2680 CCQGLDVTAWGMFIN-GTGLYVAIFMIQEQARLDLKANSLQMMPKLKSAFTIDVRFDNGWKSSTP 2743
Fly 2744 ICLEDFTQKSSSNAGRSLYLRYNSFVDIVIVERDEVLRLILEYRQEDDGRRLFK--LRSKFVFTN 2806
Fly 2807 FTDVVLNALTLAMDHKENSTREEVEAYSIC--------------KKARSLVSSESTKNCSGNAMD 2857
Fly 2858 VFYD-------LNAHKAKHN----------------CDTAFVYFV----------CF----SVGG 2885
Fly 2886 SREISIPIPLAVPFTRRCFSLQAGPESIPLMITLIEKDNVHYLNVFRDTAPAIVISNNTNVKFIV 2950
Fly 2951 AQTSASENSNVSCTNSEFVGRNFEWNQLVLPHSNCYYTPPQMYANFPDVEFTMCNLSLAVYKDKL 3015
Fly 3016 CAKNKIAWSKPIRTDKSWQKFLHVPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFS--VKDLRSRL 3078
Fly 3079 TKPE------NVLMPSQEQAAP-RPDESSEQENDTKRVTLPNMVTCAHFNE------ECESKTQT 3130
Fly 3131 RIK-----------IFIKSFVFSLQTDNRENDFVKTEVCNIYADDSMLIYDDDDDQRELRLQLPN 3184
Fly 3185 LQVDNQLYSSGKYDFPVLLCAEKLYRRNCSLPQVYDLDHVYKQQAQRTPVSLF-TFI---FYQDE 3245
Fly 3246 MQLQNVRCQI---PPFRV-YIEDAYLNQLLEALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQV 3306
Fly 3307 VAQSLYISEPLRLNSFT--VEPLNLLLSVHTSSRLYIALDHSP----LSF-SRYERQQ------- 3357
Fly 3358 ----------------ILTVPLRFGQSL---------------GLHYLSGAIFGAGWVVGSLEIL 3391
Fly 3392 GSPSGLARSFSTGLRDFVSMPVQG-LFRGPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVAR 3455
Fly 3456 NLDRLTLDAEHIELTEARR----RARPQGFADGLTQGLTGLGISLLGAVGGLAH-HTLEARSSVG 3515
Fly 3516 -VIAGLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAMPQQVEPSFIRNVALHGSSNRIWSY 3579
Fly 3580 LP-EELSR-------------DQMLFFSEI----MLQISTQLRPALLFLTSSVLAIMQSDSEDLA 3626
Fly 3627 FASPISKVDVLADREDPSKLYLSLKSER 3654 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 34/124 (27%) |
VPS13_C | 3319..3468 | CDD:293514 | 42/194 (22%) | ||
ATG_C | 3473..3546 | CDD:286423 | 23/78 (29%) | ||
vps1302 | NP_596800.2 | MRS6 | 1..>1997 | CDD:227376 | 478/2906 (16%) |
Chorein_N | 3..112 | CDD:289396 | 31/109 (28%) | ||
VPS13 | 139..365 | CDD:293513 | 57/361 (16%) | ||
VPS13_mid_rpt | 559..764 | CDD:293515 | 40/245 (16%) | ||
SHR-BD | 2085..2363 | CDD:284143 | 52/332 (16%) | ||
VPS13_C | 2601..2775 | CDD:293514 | 36/176 (20%) | ||
ATG_C | 2793..2862 | CDD:286423 | 19/68 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR16166 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.030 |