DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps13B and vps1302

DIOPT Version :9

Sequence 1:NP_651753.2 Gene:Vps13B / 43550 FlyBaseID:FBgn0039727 Length:3731 Species:Drosophila melanogaster
Sequence 2:NP_596800.2 Gene:vps1302 / 2540138 PomBaseID:SPBC16C6.02c Length:3004 Species:Schizosaccharomyces pombe


Alignment Length:4058 Identity:704/4058 - (17%)
Similarity:1281/4058 - (31%) Gaps:1498/4058 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
            ||..:...|...:.:|::||.....:|::|.|:||.:||.|:.... .:|.||:.:..|.:.||:
pombe     2 LEGLLANFLNRLLGEYIENFDATQLKVAVWNGDVTLRNLQLKRSAF-RKLELPISVQYGLVEELT 65

  Fly    69 ILVPWTKLMSEPVKIVINTIEFVAKLPDS-------------ESKQRRASFQREQRRKSKRESVE 120
            :.:||:.|.::||:|.|..|..:|.:.::             |||:|:.... |..:..|.|:..
pombe    66 LKIPWSSLKNKPVEIYIVGIRALASMEENVKSQSEVDPHQVLESKRRQMQLW-EASQIGKAETAY 129

  Fly   121 QPDQTKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIVVS----------MNVQTLNFSSAG 175
            .| :|::    .:.|::.::|:||.:...:|.:::  :.:.||          :.:...:..|..
pombe   130 DP-KTQT----FTESLITRMIDNIQINIRDIHIRF--EHLPVSNVVPGGYSFGLLLSEFSIESCN 187

  Fly   176 EDWKPTMVDIHPVSVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTV 240
            |:|..|.|:..  |..:.||..:....|..|:                  |.||  :.|.:.|.:
pombe   188 EEWTSTFVETE--SQTIYKLCSLRGFGIYSDE------------------TAEC--IDKTDINEL 230

  Fly   241 STTSTTRIGVF------------TKSLDINVSSLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQE 293
            ..|....|..|            |....:.::.|..|.:.|.:..:                   
pombe   231 MNTFQALITDFQSREKDYIIAPVTGMAKVTINKLPTPEIPRFLSQI------------------- 276

  Fly   294 AVAEGSESQQGTESAGRSVFWWAWSLLPSFDTEAPSS--SCDTPTGHAFDLGVYAEELNFQLKNS 356
                   |.:|                  ||.....|  ||.....|  :|.....:|.|:    
pombe   277 -------SFRG------------------FDVSLNDSQISCGMSLAH--ELQDVMSKLAFR---- 310

  Fly   357 EYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDR 421
                       |||    :..:||.                          .||     |.|   
pombe   311 -----------KRI----VGNVSLD--------------------------TPL-----DYL--- 326

  Fly   422 NLVNTQEFQQERSFIDKSLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVP 486
                       |....|:|.|.......|||.:..  .:..:..:...|::...||..:      
pombe   327 -----------RFIFQKTLHDIQQKHYARSWPAIK--AFCEKRRNYIKLYKKKFLAVQL------ 372

  Fly   487 KPSSHPVAESQLRDLGVRIQYRLLSAGITFHFSQSFVQVKKVISDLIRPYDYPGYRSESMKDEDR 551
              |:....|..:.:|.:.|.                 |:|     |.|...|...::|..:    
pombe   373 --SADESKELDVLELNLDIS-----------------QLK-----LFRSLAYQEIKNEGFE---- 409

  Fly   552 GVPEPENKNSEMTIPDLEYLMGLVPTCNYKIELRNIVVQLYPRQQ-------------QDESSAI 603
              |:|                                    |:||             .||:..:
pombe   410 --PQP------------------------------------PKQQGWGSWMWNSFRGASDENGEV 436

  Fly   604 NQHQLTTTVRQSLLPYLQLKISLVEGTMCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKN 668
            ...|     |::::..:.|..|::|....|.:.                              .|
pombe   437 TDDQ-----RKTVIDAIGLNDSIIESAHVGDLQ------------------------------SN 466

  Fly   669 LALMIMNTTPDNGRAKLLNIPRVQVNWNRLLAPHLWRQNEAPLETSEIKSEIITLEFSKRELIIA 733
            .:|..:.....:|:..||..|:                          |..:|:||         
pombe   467 TSLFDVRLEVPSGKFSLLKYPK--------------------------KENVISLE--------- 496

  Fly   734 KRLVPLISSFSGQDLCDLAHIVANVNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDA 798
                 |::.|| |..|:                            .|.::.:|.:|||:..:.| 
pombe   497 -----LLNFFS-QFKCN----------------------------KKDYSFVANLGSLKMYNDD- 526

  Fly   799 VHTKMNIRNVVLSTSKNADNKWLEMQCQ--FPLEEVHSEQEKIPGTVVCLWLEPFRITTDIYLL- 860
                   ||.:.  .:...||.:|....  |.|....|..:......:.:.|.......|..|| 
pombe   527 -------RNFLY--PRETSNKEIETTSPSIFTLSFERSSSDDNDTDTLGINLRALEFFYDPNLLL 582

  Fly   861 -----QFLNFSDNSGRQITK-DKEVETDLES-----------------VN-QSEPPI---TQSVS 898
                 |...|::::||::.: ..:..||..|                 || |.:.|:   .:..:
pombe   583 RVKGFQSSLFANDNGRKLVRLANDAVTDFTSQTVQNLQEYLNEKRKLNVNFQFQTPLLIFPEDCN 647

  Fly   899 NYSTISASAIA-FNDFQPRRISRNNSRKISVPEETVHLSSERDERHTQAEPLTI-PVANKPQPSN 961
            |..:.|....| |.....:.:..|:....|..|...||..:|.....::..|.: |:......||
pombe   648 NPESFSLFVDAGFISITSQNVETNDKESNSESETLYHLIYDRYRVSLESARLLLGPLNELKNESN 712

  Fly   962 FDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRKTPGHTDVEYTSIRLP---HMKVKSGNCEAIQR 1023
                                  ||:....:|.:.  :|::...:.|:|   :.::|         
pombe   713 ----------------------KINEEYYLMNEL--NTEIFIQAQRVPTPQYPRIK--------- 744

  Fly  1024 GNIRGVIPVASNTELLNWVFDLNEFNVCYRRANVTEMIIAPVRTTITLALSFKTSDKVDGSKGKE 1088
                    |..|...|:::....:|.:....|:             |:....|.||..|....:.
pombe   745 --------VEGNMPCLSFILSDAQFRILNNLAS-------------TMLKDGKASDDDDNGDWRP 788

  Fly  1089 DKCANTCSINVHVDMSAINIFAQRVKLLHEHCLIISKMYGSLCPDEPASKWQTGKMKPRLEVYTG 1153
            :   ::.|::.|.....:|                      ..|.|.:.|               
pombe   789 E---SSESLDSHESEYKLN----------------------NTPSEQSVK--------------- 813

  Fly  1154 SAQNYPVIKEFLELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSKIVMSLEDLL 1218
                   :..|.|.  |.:..:|       .::.|:          |:|...::|.:.::...||
pombe   814 -------VSHFFEF--NMKLGEV-------TLILCR----------EDSQTKRNSMVSVNFAKLL 852

  Fly  1219 LNIDKHSDFNKITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLPLISVVITTVSLEDLYA 1283
            |:.::..|.:.:...|.:|.:|             |:..|...|:..           .|...||
pombe   853 LSFNQFEDNSHLRMSINSFHIN-------------DMLSKSSRDNNR-----------QLMRCYA 893

  Fly  1284 --KIGARNPHNKQHTISEVLIEVQPIEMVLNLDQITEFMVPIC-------------EVLEIIGNS 1333
              .:.|.|        :.|::|::.::...|..:....:..:|             .::|.:.:.
pombe   894 PDSVDAEN--------TPVIVEIKSVKAGENQSETNTTVDFLCANGDFYLAKFSILTLIEFLPSF 950

  Fly  1334 ASAQSANKPSAPVPSKITTVQDLPMVHLNSKGIYVYLPLSTGKKSCSVLLLRIESIQLTPSLEN- 1397
            |...|.:|.|.|..|             ||         :.||...:..:.:| .::|..:.|: 
pombe   951 APPPSNDKQSTPQVS-------------NS---------AAGKMELNFKIHKI-GLRLLENYESK 992

  Fly  1398 PLVRQLVRPDIYQKAAELNMLSTPG-ALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASKHD 1461
            |:...|:       |.:|::.||.| :.||.|..::.|..       |...:: .|...:.||.|
pombe   993 PICIDLL-------ALDLSVNSTKGISEVESRVDKIQVMA-------WDHEKD-EIVTLIDSKQD 1042

  Fly  1462 ------------------NPAFEWNNQSQS-TELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSV 1507
                              ||:.:.|.:..| |.|.|.:..::   |:.||....:.:.:|  |||
pombe  1043 SLFDLKCKMQEGWFIHSPNPSTDVNIKMGSFTMLCHKQPIEE---ILNYASNFGHYKAIV--QSV 1102

  Fly  1508 EYNCATDFVASLNTHQISLISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNISKYNSVDNS 1572
            :|      :|...|||:                               ...|..||:.|  :.|.
pombe  1103 KY------LAETGTHQV-------------------------------QQGTNVNINLY--ISNP 1128

  Fly  1573 IY-FPAD------------PKVF--KKDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSDYFYGS 1622
            |: .|..            |..|  |..:|:|..:..|.|:       ||:......|.|:    
pombe  1129 IFQIPLTLENGSSAMVEILPGSFSLKTPSWLPNLTLNLESK-------STTLRTIYYSKDF---- 1182

  Fly  1623 CQSDSGIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSFVA-----GIFVLKIYDVLELEE 1682
              .:.|          ::....:::|.|.....|.:..|:::..|     ||..|.|:       
pombe  1183 --DEKG----------NQITVLDDLNISLDGSIVQAVDSAITNYAIDLHCGISELLIH------- 1228

  Fly  1683 LERPVMKPLFLMTVSQPSFMSTQN-FKAAVTQASIF-----------NVNISVAKADVDGKVD-- 1733
            |.:.....|..:..:.|..:|..| |.|.|...|:.           .||.:::....:...|  
pombe  1229 LSQAQYLILLKLASNLPEMLSIANAFSANVDAPSVMTLLSEELYSIDTVNDAISNLSQNSSFDMK 1293

  Fly  1734 --------SERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLHQKEVDVELRKPILLRICENTI 1790
                    |....:..|.|....|.      ||........|. :...|::.....|:::....|
pombe  1294 FGLHFPKISLNLYDGTFITPENSLS------PLSNFTLNEIRA-EGSYDLKTGASALIKMASLAI 1351

  Fly  1791 KQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNAD-------------RFHLSCD 1842
            :.:.|:..|.::        ||..|....| ||| |:... |..|             .:.||.|
pombe  1352 EDVRSEKSRYFS--------NVIIPSTDTE-SQL-QVSFQ-YKPDTSSILLEGDIFKSMYVLSLD 1405

  Fly  1843 RITAKFY--------------DEERSYKC-SFVWL---------DVSTRIKFSSRPQKAVI---- 1879
            .:.:.:|              |:.:|.:. |.|..         .:|..::|..|....|.    
pombe  1406 HLLSIYYWFGQPLMEKKLESPDDVQSLQAESSVSTPAVTAASEKSISLSVRFDIRNTSLVFVADA 1470

  Fly  1880 -RSNIGSFYVQSGEKMLLHPLLMRLSVDLVS--------------------------EPWSEELL 1917
             :|...:..:::.:..|:..|...|:|..:.                          :..||...
pombe  1471 SKSTSQAIVLRTDQISLVKQLSYSLTVQKMGMFVTRMDKLDDGIQILDDFDIGFGLVQDCSENKS 1535

  Fly  1918 VNATLKLNYLHIDAGVFSILQLQK-AQQGVNRIREYADRE------------WQQFLRSRPVLGT 1969
            .:|||.|:.|.....|:.:|.||. ||..|:.|..|.|:.            .||.|.:..:...
pombe  1536 FSATLDLDRLLFRISVYDLLLLQSIAQASVSVISSYKDKSSSISENMNSGDYGQQILNASNIAAV 1600

  Fly  1970 -PKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLNSESVLPMPYQVQIIKK 2033
             .|.......:.....|:|:        .:.||   .:.:...|.:.::....||: :...|  :
pombe  1601 QQKAEQTATTLLTVLGHDSL--------ISEEF---TINSAGIQLILISDAHCLPV-FDFTI--E 1651

  Fly  2034 NYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEYFSETHETFLHYCDFMLSETSTKQLTP 2098
            |:.::            :..:...:..:..:.:.|....|:::|                     
pombe  1652 NFNVL------------VKDWSTNLSATTSLTLHCNAFNFAKSH--------------------- 1683

  Fly  2099 PDRPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEYLQSDFKVDENNDFILHPKVLVGCMRID 2163
                     |..||.....|......:|..:             |:.|:|.|  .::.:..|.:.
pombe  1684 ---------WEPVIEPWTFSTTAIMKDGMHE-------------VNINSDDI--AQISLTPMMVT 1724

  Fly  2164 TVFRAEKVPKLQLLLCCQDIELNFVNQTDNTGELPKQLNKYRLRQTP-NITQTFLTVHVEDLQMH 2227
            .|.|.              |:....||.:|..:.|:......|.||. |::..:..::..::|  
pombe  1725 DVHRL--------------IKFYLTNQENNIEKRPEGYPYVILNQTGYNLSIQYGNLNSSEMQ-- 1773

  Fly  2228 SRIYSRNDFSLQTEMRARVKCLDYGFLNMLDVLEPMKFSSYVRLTDYPRSLVQANFLVDKLRLNC 2292
                   ..||.:.     ||:            |.:|.|...||....|.||.  :..|:|   
pombe  1774 -------SLSLPSG-----KCV------------PCRFESKEVLTSRMSSKVQD--VATKVR--- 1809

  Fly  2293 GPHVIHTLLSSKYHWQEVLQQKDVRHVLMPKLVIVNRIQTPISFGQT-NTVEKIPVNPGEVQLYH 2356
                                                     :||..| ..|:::.|:.....||.
pombe  1810 -----------------------------------------VSFDSTWYPVDEVSVHQEGSFLYE 1833

  Fly  2357 FRSCSHVQELTFFITNPKTLLVDSSDSVHIALKFEDEEKIHNLRVGEYCITLKLAKLSTTQIYIL 2421
            .:  ..:.:.||.:                                   :|:.|.:.:..||   
pombe  1834 LK--PRIDQRTFLL-----------------------------------VTVVLLESNIKQI--- 1858

  Fly  2422 VKGQIELVSMVPFNLVTEFREE-EINYDESTPPEHLLLSKERSSYYQNVKRNADINMRLKLTAGL 2485
                   :...|:::|...:|. |:            :..:||.:.|:.....|.|         
pombe  1859 -------ILSSPYSIVNRTKEVIEV------------VCNDRSGHRQSSVIKIDPN--------- 1895

  Fly  2486 GRGRTGDIPLKTNNNLPWLVKVPTQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIFE 2550
               .||.:||    :|..|..:..:...:...:|...:.:...::|     .|.:.|.|      
pombe  1896 ---ETGYVPL----DLACLYPLRIRPVSKLGFLWSNQIVDWHSLNK-----SPLQYLTC------ 1942

  Fly  2551 ICNMLSCAVKATESTTGESSTIEAMGGRWALNTATTHATEHNIGFTFSGILRGSSKDEYS-LMLR 2614
                        |||:..          |          :||:......::.||.:::|. |.|.
pombe  1943 ------------ESTSTS----------W----------KHNLLVFARNLMDGSLQNDYPFLQLN 1975

  Fly  2615 TMDWHKFFYYDPTVWTIENALHKLGKSSKRKWPLNDPEELRVSRVLDFENAFDVKYQTKATREFS 2679
            .:         ||: .|||.|               |.|:.: |:::..:..|            
pombe  1976 IL---------PTL-QIENLL---------------PYEINL-RIIERSSGND------------ 2002

  Fly  2680 CCQGLDVTAWGMFIN-GTGLYVAIFMIQEQARLDLKANSLQMMPKLKSAFTIDVRFDNGWKSSTP 2743
                     |...:: |..|.:.....:....:.:....|.:.|       :|:          |
pombe  2003 ---------WRSSLSPGDSLPILHTDSKSFLLMGINVPDLDLQP-------VDL----------P 2041

  Fly  2744 ICLEDFTQKSSSNAGRSLYLRYNSFVDIVIVERDEVLRLILEYRQEDDGRRLFK--LRSKFVFTN 2806
            |.   :|..||....::..|       :...::.:|::|||:|.:......:.|  :...:|..|
pombe  2042 II---YTPISSGQDVQTSAL-------LTASDKQDVVKLILKYEKLPGTNYVSKVMIYPPYVIFN 2096

  Fly  2807 FTDVVLNALTLAMDHKENSTREEVEAYSIC--------------KKARSLVSSESTKNCSGNAMD 2857
            .||:.:...:    ...||.|..:.:.|..              :|.|:::|.::..:.|.   |
pombe  2097 HTDLSIQVTS----SSPNSIRYTIPSGSYSNDIKPYFYSFDESGRKNRAMISIDNGTSWSA---D 2154

  Fly  2858 VFYD-------LNAHKAKHN----------------CDTAFVYFV----------CF----SVGG 2885
            :.:|       :...|...:                |.|..|.|.          |.    ..|.
pombe  2155 IGFDTLGSSSQVEVRKTNESDVCLLGMSISESSGKFCLTKSVTFTPRFVFKNHLDCTVSLREFGS 2219

  Fly  2886 SREISIPIPLAVPFTRRCFSLQAGPESIPLMITLIEKDNVHYLNVFRDTAPAIVISNNTNVKFIV 2950
            |:.:.:|....:|.  ..||   .|:.|.|:::|...:| |:.:.|        ::.|..:..:.
pombe  2220 SKVLHLPSNELIPM--MYFS---NPQEIALLLSLPSSNN-HWTSPF--------LAQNVGIVHLK 2270

  Fly  2951 AQTSASENSNVSCTNSEFVGRNFEWNQLVLPHSNCYYTPPQMYANFPDVEFTMCNLSLAVYKDKL 3015
            |.....:::|:|.|.....        :.|..:..:.|..:....:|             ::.|.
pombe  2271 AFEFDDDDNNMSTTLLRLC--------VTLEDATFFVTITKEDKAWP-------------FRLKN 2314

  Fly  3016 CAKNKIAWSKPIRTDKSWQKFLHVPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFS--VKDLRSRL 3078
            |...:|.:.:. |.|         |...|.:.:...:.....||   ..::..:|  ...|:|:|
pombe  2315 CTSREICYEQK-RPD---------PESVDSRFLQGSRSMKYALN---PGEEANYSWDFPILKSKL 2366

  Fly  3079 TKPE------NVLMPSQEQAAP-RPDESSEQENDTKRVTLPNMVTCAHFNE------ECESKTQT 3130
            .:.|      ::.:.|..|..| .|.|..::......|.:.::.:...|||      :..|:|.:
pombe  2367 LQVEVGKAIHDLDISSVGQLEPWHPTELDQKIRIHPEVKVDSLTSLVTFNEIDLSKPKLPSRTNS 2431

  Fly  3131 RIK-----------IFIKSFVFSLQTDNRENDFVKTEVCNIYADDSMLIYDDDDDQRELRLQLPN 3184
            .:|           :.:|.|..|| .|.:..:|....:.|.     ...:||..|.....:.|..
pombe  2432 NVKGSIVEQKFKLVLQLKGFGISL-IDKKYEEFAYATLKNF-----TFRFDDSKDLNTFGMSLGW 2490

  Fly  3185 LQVDNQLYSSGKYDFPVLLCAEKLYRRNCSLPQVYDLDHVYKQQAQRTPVSLF-TFI---FYQDE 3245
            ||:|||:                             ||.||       |::|| |.|   ..||:
pombe  2491 LQIDNQM-----------------------------LDSVY-------PIALFPTMITQEVKQDD 2519

  Fly  3246 MQLQNVRCQI---PPFRV-YIEDAYLNQLLEALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQV 3306
            .||..:|..:   ..|.: ||:  |.:.||:.|          |..|| |:::|.....|.|...
pombe  2520 PQLLQLRFSVLKDSSFNILYIK--YASLLLQEL----------SLEVE-DRLVLTLLQLLYPSSD 2571

  Fly  3307 VAQSLYISEPLRLNSFT--VEPLNLLLSVHTSSRLYIALDHSP----LSF-SRYERQQ------- 3357
            |::.   |..|..|:|.  .|..:|...|:.|:..:..|...|    :|| :.||..|       
pombe  2572 VSKD---SASLSKNAFADKFEIPDLDADVYRSNVFFETLHLQPTRLNISFETSYESDQPAVKSSN 2633

  Fly  3358 ----------------ILTVPLRFGQSL---------------GLHYLSGAIFGAGWVVGSLEIL 3391
                            |...|::....|               ..||.....:....:.|..:.|
pombe  2634 PTLDFMTGILISTLGNIHDAPVQLNSILLENARGTLSEMANRVASHYKQQVGYQIYKIAGRADFL 2698

  Fly  3392 GSPSGLARSFSTGLRDFVSMPVQG-LFRGPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVAR 3455
            |:|.||..:.::|:.|....|.|| |.:....|.....:|::|.:|....|..:||:|:.|::::
pombe  2699 GNPVGLFNNVASGVFDMFYEPYQGFLLQDSQSFGDSFARGTSSFMRKTIYGVSDSVSKITGTISK 2763

  Fly  3456 NLDRLTLDAEHIELTEARR----RARPQGFADGLTQGLTGLGISLLGAVGGLAH-HTLEARSSVG 3515
            .|..:|:|.::   ..:||    |.||:....|:|.|......|:.....||.. .|....:|.|
pombe  2764 GLSTMTMDPKY---QNSRRRFRSRNRPKEAVYGVTAGANSFYDSMSSGFKGLKKPFTDPKNNSAG 2825

  Fly  3516 -VIAGLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAMPQQVEPSFIRNVALHGSSNRIWSY 3579
             .:.|..||::|..|||..|..:|.:...:|:.::......|:..:....|.|...|   .|..:
pombe  2826 KFLKGFGKGMLGLATKPAIGLLDMTSNVSEGIRNSTDVRTNPEIDKVRVPRYVEFGG---LIVPF 2887

  Fly  3580 LP-EELSR-------------DQMLFFSEI----MLQISTQLRPALLFLTSSVLAIMQSDSEDLA 3626
            .| |.|.:             |:.|:.:||    :|.|||:    ...:|.|...:        .
pombe  2888 KPYESLGKYMLSCLDDGKYAFDEYLYHAEIQNVDILYISTK----HFIITGSNYIV--------K 2940

  Fly  3627 FASPISKVDVLADREDPSKLYLSLKSER 3654
            .|.|:.::..|...|......||.||.|
pombe  2941 IAVPVKQISGLRVSEHDLVCTLSNKSVR 2968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps13BNP_651753.2 Chorein_N 5..117 CDD:289396 34/124 (27%)
VPS13_C 3319..3468 CDD:293514 42/194 (22%)
ATG_C 3473..3546 CDD:286423 23/78 (29%)
vps1302NP_596800.2 MRS6 1..>1997 CDD:227376 478/2906 (16%)
Chorein_N 3..112 CDD:289396 31/109 (28%)
VPS13 139..365 CDD:293513 57/361 (16%)
VPS13_mid_rpt 559..764 CDD:293515 40/245 (16%)
SHR-BD 2085..2363 CDD:284143 52/332 (16%)
VPS13_C 2601..2775 CDD:293514 36/176 (20%)
ATG_C 2793..2862 CDD:286423 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5043
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16166
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1642
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

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