| Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_150648.2 | Gene: | VPS13A / 23230 | HGNCID: | 1908 | Length: | 3174 | Species: | Homo sapiens |
| Alignment Length: | 4114 | Identity: | 724/4114 - (17%) |
|---|---|---|---|
| Similarity: | 1300/4114 - (31%) | Gaps: | 1526/4114 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 ESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELSI 69
Fly 70 LVPWTKLMSEPVKIVINTIEFVAKLPDS--------ESKQRRASFQREQRR--KSKRESVEQPDQ 124
Fly 125 TKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIV-------VSMNVQTLNFSSAGEDWKPTM 182
Fly 183 VDIHPVSVVMRKLLQ----------------VSDLTICLDK-RNTAGRIEVCQEPVLYRCTLECR 230
Fly 231 VLRKYNANTVSTTSTTRIGVFTKSLDINVSSLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQEAV 295
Fly 296 AEGSESQQGTESAGRSVFWWAWSLLP--SFDTEAPSSSCDTPTGHAFDLGVYAEELNFQLKNSEY 358
Fly 359 FTDQSMGGIKRIRYTPILRISLGGLYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDRNL 423
Fly 424 VNTQEFQQERSFIDKSLFDE--------NYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDV 480
Fly 481 IEHRVPKPSSHPVAESQLRDLGVRIQYRLLSAGITFHFSQSFVQVKKVISDLIRPYDYPGY---- 541
Fly 542 --RSESMKDEDRGVPEPENKNSEMTIPDLEYLM---------GLVPT-------CNYKIELRNIV 588
Fly 589 VQLYPRQQQDESSAINQHQLTTTVRQSLLPYLQLKISLVEGTMCGPVNP-VRLVQLITHLEEKPR 652
Fly 653 DVVNACYNCFHFNVKNLALMIMNTTPDNGRAKLLNIPRVQVNWNRLLAPHLWRQNEAPLETSEIK 717
Fly 718 SEIITLEFSKRELIIAKRLV-PLISSFSGQDLCDLAHIVANVNVNSDVIKLQSVGTKLNLVYHKY 781
Fly 782 HTHLAAVGSLQGVHTDAVHTKMNIRNVVLSTSKNADNKWLEMQCQFPLEEVHSEQEKIPGTVVCL 846
Fly 847 WLEPFRITTDIYLLQFLNFSDNSGRQITKDKEVETDLESVNQSE-PPITQSVSNYSTISASAIAF 910
Fly 911 NDFQ-------PRRISRN--NSRKISVPEETVHLSSERDERHTQAEPLTIPVANKPQPSNFDTTD 966
Fly 967 FVKRLTKMVVLVEIAQAKIDVCEVMMRKTPGHTDVEYTSIRLPHMKVKSGNCEAIQRGNIRGVIP 1031
Fly 1032 VAS---NTELLNWVFDLNEFNVCYRRANVTEMIIAPVRTTITLALSFKTSDKVDGSKGKEDKCAN 1093
Fly 1094 TCSINVHVDMSAINIFAQRVKLLHEHCLIISKMYGSLCPDEPASKWQTGKMKPRLEVYTGSAQNY 1158
Fly 1159 PVIKEFLELDPNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSKIVMSLEDLLLNIDK 1223
Fly 1224 HSDFNKITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLPLISVVITTVSLE------DLY 1282
Fly 1283 AKIGARNPHNKQHTIS--EVLIE-VQPIEMVLNLDQITEFMVPICEVLEIIGNSASAQSANKPSA 1344
Fly 1345 PVPSKITTVQDLPMVHLNSKGIYVYLPLSTGKKSCSVLLLRIESIQLTPSLENPL-VRQLVRPDI 1408
Fly 1409 YQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASKHDNPAFEWNNQSQS 1473
Fly 1474 TELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEYNCATDFVASLNTHQISLISCIIVRAQRLG 1538
Fly 1539 CIIDQVCVKNAELPK-ARSHKTLGNISKYNSV--DNSIYFPADPKVFKKDTWIPKSSKKLVSERL 1600
Fly 1601 SYTNASTSFTDAKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSF 1665
Fly 1666 VAG----IFVLK-IYDVLELEELERPVMKPLFLMTVSQPSFMSTQNFKAAVTQASIFNVNISVAK 1725
Fly 1726 ADVDGKVDSERFNESVFATLPGQL----------GSSGIPPP---LLTIKTQYDRLHQ------- 1770
Fly 1771 -KEVDVELRKPILLRICENTIKQLASDVFRIYTVLHETPCFNVRSPRPVPEGSQLRQLKMNCYNA 1834
Fly 1835 DRFHLSCDRITAKF--------YDEERSYKCSFVWLDVSTRIKFSSRPQKAVIRSNIGSFYVQSG 1891
Fly 1892 EKMLLHPLLMRLSVDLVSEPWSEELLVNATLKLNYLHIDAGVFSILQLQKAQQGVNRIREYADRE 1956
Fly 1957 WQQFLRSRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLNSESV 2021
Fly 2022 LPMPYQVQIIKKNYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEYFSETHETFLHYCDF 2086
Fly 2087 MLSETSTKQLTPPDRPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEYLQSDFKVDENNDFIL 2151
Fly 2152 HPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIEL-----NFVNQTDNTG--------------EL 2197
Fly 2198 PKQLN-KYRLR---QTPNITQTFLTVHVEDLQMHSRIYSRND-----FSLQTE-----------M 2242
Fly 2243 RARVKCLDYGFLNMLDVLEPMKFSSYVRLTDYPRSLVQ-------ANFLVDKLRLNCGPHVIHTL 2300
Fly 2301 L---SSKYHWQEVL------------QQKDVRHVLMPKLVIVNRIQTPISFGQTNTVEKIP---- 2346
Fly 2347 -VNPGEVQLYHFRSCSHVQELTFFITNPKTLLVDS---------SDSVHIALKFEDEEKIHNLRV 2401
Fly 2402 GEYCITLKLAKLSTTQIYILVKGQIELVSMVPFNL-----------VTEFREEEINYDESTPPEH 2455
Fly 2456 LLLSKERSSYYQNVKRNADINMRLKLTAGLGRGRTGDIPLKTNNNLPWLVKVPTQSAQQFISIWV 2520
Fly 2521 RILREDIKMDKPAEDFQPQKIL------ICIWP--IFEICNM---LSCAVKATES------TTGE 2568
Fly 2569 SSTIEAMGGR-----WALNTATTHATEHNIGFTFSG-----ILRGSSKDEYSLMLRTMDWHKFFY 2623
Fly 2624 YDPTVWTIENALHKLGKSSKRKWPLNDPEELR--------------VSRVLDFENAFDV---KYQ 2671
Fly 2672 T-----KATREFSCCQGLDVTAWGMFINGTGLYVAIFMIQEQARLDLKANS---------LQMMP 2722
Fly 2723 KLKSAFTIDVRFDNGWKSS------TPICLED-----------------FT-------QKSSSNA 2757
Fly 2758 GRSL-------YLRYN--------------SFVDIVIVERDEVLRL------------------- 2782
Fly 2783 ----------ILEYRQEDDGRR---------LFKLRSKFVFTNFTDVVLNALTLAMDHKENSTRE 2828
Fly 2829 EVEAYSICKKARSLVSSESTKNCSGNAMD----VFYDLNA----------------HKAKHNCDT 2873
Fly 2874 AFVYFVCFSVGGSREISIPIPLAVPFTRRCFSLQAGPE--SIPLMITLIEKDNVHYLNVFRDTAP 2936
Fly 2937 AIVISNNTNVKFIVAQTSASENSNV---------SCTNSEFVGRNFEWNQLVLPHSNCYYTPPQM 2992
Fly 2993 YANFPDVEFTMCNLSLAVYKDKLCAKNKI--AWSKPI-------RTDKSWQKFLHVPHHGDVKVV 3048
Fly 3049 VCDKHRAIRL---NIYYIA-----QQLEFSVKDLR-SRLT-KPENVLMPSQEQAAPRPDES-SEQ 3102
Fly 3103 ENDTKRVTLPNMVTCAHFNEECESKTQTRIK-IFIKSFVFSLQTDNRENDFVK------TEVCNI 3160
Fly 3161 YADDSMLI------------------------------YDDDDDQRELRLQLPNLQVDNQLYSSG 3195
Fly 3196 KYDFPVLLCAEKLYRRNC--SLPQVYDLDHVYKQQAQRTPVSLFTFIFYQDEMQLQNVRCQIPPF 3258
Fly 3259 RVYIED-------AYLNQLLEALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQVVAQSLYISEP 3316
Fly 3317 LRL-NSFTVEPLNLLLSVHTSSRLYIALD----------HS--------------------PLSF 3350
Fly 3351 SRYERQQILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQG 3415
Fly 3416 LFRGPWGFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQG 3480
Fly 3481 FADGLTQGLTGLGISLLGAVGGLAHHTLEAR---SSVGVIAGLTKGIVGALTKPISGAAEMLALT 3542
Fly 3543 GQGVLHTVGFNAMPQQVEPSFIRNVALHGSSNRIWSYLPEELSRDQML------------FFSEI 3595
Fly 3596 MLQISTQL---RPALLFLT 3611 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Vps13B | NP_651753.2 | Chorein_N | 4..121 | CDD:463646 | 34/125 (27%) |
| VPS13_C | 3319..3468 | CDD:465310 | 48/179 (27%) | ||
| MRS6 | <3369..3634 | CDD:227376 | 66/261 (25%) | ||
| VPS13A | NP_150648.2 | MRS6 | 4..>2104 | CDD:227376 | 512/3009 (17%) |
| TPR 1 | 212..245 | 5/32 (16%) | |||
| TPR 2 | 373..406 | 6/62 (10%) | |||
| TPR 3 | 537..575 | 8/64 (13%) | |||
| FFAT. /evidence=ECO:0000269|PubMed:30741634 | 842..848 | 3/8 (38%) | |||
| TPR 4 | 1256..1289 | 9/33 (27%) | |||
| TPR 5 | 1291..1320 | 10/44 (23%) | |||
| TPR 6 | 2009..2041 | 4/31 (13%) | |||
| SHR-BD | 2209..>2356 | CDD:461974 | 30/178 (17%) | ||
| TPR 7 | 2568..2601 | 7/38 (18%) | |||
| MRS6 | <2598..3098 | CDD:227376 | 110/535 (21%) | ||
| TPR 8 | 2717..2751 | 6/40 (15%) | |||
| Required for mitochondrial localization. /evidence=ECO:0000269|PubMed:30093493, ECO:0000269|PubMed:30741634 | 2751..3174 | 86/356 (24%) | |||
| VPS13_C | 2766..2943 | CDD:465310 | 47/178 (26%) | ||
| Required for lipid droplet localization. /evidence=ECO:0000269|PubMed:30093493 | 2953..3027 | 22/73 (30%) |