Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001348703.1 | Gene: | C25H3.11 / 173962 | WormBaseID: | WBGene00016120 | Length: | 3314 | Species: | Caenorhabditis elegans |
Alignment Length: | 4223 | Identity: | 766/4223 - (18%) |
---|---|---|---|
Similarity: | 1357/4223 - (32%) | Gaps: | 1548/4223 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIEFVAKLPDSESK-QRRASFQREQRRKSKR-ESVEQPDQTK----- 126
Fly 127 -SPGPAS-----SSSVVNKIINNINLQCHNIILKYVEDDIVV-------SMNVQTLNFSSAGEDW 178
Fly 179 KPTMVDIHPVSVVMRKLLQVSDLTICLDKRNT-------AGRIEVCQEP-------VLYRCTLEC 229
Fly 230 RVLRKYNANTVSTTSTTRIGVFTKSLDINVSSLQFPMVMRLVKMLLELKP--------------- 279
Fly 280 -------AEFEDDPQNPEDQEAVAEGSESQQGTESAGRSVFWW------------------AWSL 319
Fly 320 LPSFDTEAPS---------------------------SSCDTPTGHAFDLGVYAEELNFQLKNSE 357
Fly 358 YFTDQSMGGIKRI----RYTPILRISLGGLYYERTILKECDWANV------KAGLSSMCMEPLGA 412
Fly 413 YRS------DDLVDRNLVNTQ--------------------EFQQERSF----ID---------K 438
Fly 439 SLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDV---IEHRVPKPSSHPVAESQLRD 500
Fly 501 LGVRIQYRLLS---AGITFHF----SQSFVQVKKVISDLIRPYDYPGYRSESMKDEDRGVPEPEN 558
Fly 559 KNSEMTIPDLEYLMGLVPTCNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTVRQSLLPYLQLK 623
Fly 624 ISLVEGTMCGPVNPVRLVQLITHLEEKPRDVVNACYNC--------------------------- 661
Fly 662 FHFNVKNLALMIMNTTPDNGRAKLLNIPRVQVNWNRLLAPHLWRQNEAPLETSEIKSEIITLEFS 726
Fly 727 KRELIIAKRLVPLISSFSGQDLCDLAHIVANVNVNSDVIKLQSVGTKLNLVYHKYH-THL-AAVG 789
Fly 790 SLQGVHTDAVHTKMN--IRNV---VLSTSKNADN-KWLEMQC--------QFPLEEVHSEQ---- 836
Fly 837 ----EKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGRQITKDKEVETDLESVNQS-EPPITQS 896
Fly 897 VSNYS-TISASAI--AFNDFQPRRISRNNSRKISVPEETVHLSSER-------------DERHTQ 945
Fly 946 AEPLTIPVANKPQPSNFDTTDFVKRLTKMVVLVEIA-------------QAKIDVCEVMMRKTPG 997
Fly 998 HTDVEYTSIRLPHMKVKSGNCEAIQRGNIRGVIPVASNTELLNWVFD---LNEFNVCYRRANVTE 1059
Fly 1060 MIIAPVRTTITLALSF----KTSDKVDGSK----------GKEDKCANTCSINVHVDMSAINIFA 1110
Fly 1111 QRVKLLHEH---CLIIS--KMYGSLCPDEPASKWQTGKMKPRLEVYTGSAQNYPVIKEFLELD-- 1168
Fly 1169 --PNFEAPKVKSAPKSSVILFCQWTIPRISFEMENSNDFKHSKIVMSLEDLLLNI-DKH---SDF 1227
Fly 1228 ---NKITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDSTNLPLI--------SVVITTVSLEDL 1281
Fly 1282 YAKIGARNPHNKQHTISEVLIEVQPIEMVLNLD--QITEFMVPICEVLEIIGNSASAQSANKPSA 1344
Fly 1345 PVPSKI-TTVQDLPMVHLNSKGIYVYLPLSTGKKSCSVLLLRIESIQLTPSLENPLVRQLVRPDI 1408
Fly 1409 YQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKTLASKHDNPAFEWNNQSQS 1473
Fly 1474 TELDHMEIFKDFDFIMIYAPAISYDRFLVCGQSVEY---------NC----------------AT 1513
Fly 1514 DFVASLNTHQISLISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNISKYNSVDNSIYFPAD 1578
Fly 1579 PKVFKKDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLA 1643
Fly 1644 AEEINRSGRQPFVLSYPSSVSFVAGIFVLKIYDVL---ELEELERPVMKPLFLMTVSQPSFMSTQ 1705
Fly 1706 NFKAAVTQASIFNVNISVAKADVDGKVDSERFNESVFATLPGQLGSSGIPPPLLTIKTQYDRLHQ 1770
Fly 1771 KEVDVELRKPILLRICENTIKQLASDVFRIYTVLH-ETPCFNVRSPRPVPEGSQLRQLKMNCYNA 1834
Fly 1835 DRFHLSCDRITAKFYDEERSYK--CSFVWLDVSTRIKFSSRPQKAVIRSNIGSFYVQSGEKMLLH 1897
Fly 1898 PLLMRLSVDLVSEPWSEELLVNATLKLNYLHIDAGVFSILQLQKAQQGVNRIREYADREWQQFLR 1962
Fly 1963 SRPVLGTPKDVSPCNLIKCTPSHESIERIKRPLKSNAEFYQDDLRAGAFQFVYLNSESVLPMPYQ 2027
Fly 2028 VQIIKKNYGIICWRYPQPRQMTSIHIYPVPMPVSRPIHIRCRMEYFSE--------THE----TF 2080
Fly 2081 LHYCDFMLSETSTKQLTPPDRPICATIWRVVILQSLISVDGTCFEGSEDEDLSIEYLQSDFKVDE 2145
Fly 2146 NNDFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIELNFVNQ--TDNTGELPKQLNKYRLRQ 2208
Fly 2209 TPNITQTFLTVHVEDLQMHSRIYSRNDFSLQTEMRARVKCLDYGFLNML---------------- 2257
Fly 2258 ---DVLEPMKFSS---YVRLTDYPR-SLVQANFLVDKLRLNCGPHVIHTLLSSKYHWQEVLQQKD 2315
Fly 2316 VRHVLMPKLVIVNRIQTPISFGQTNTV----EKIPVNP-GEVQL-YHFRSCSHVQELTFFITNPK 2374
Fly 2375 TLLVD---SSDSVHIA---------LKFEDEEKIHNLRVGEYCITLK--------LAKLSTTQIY 2419
Fly 2420 ILVKGQIELVSMVPFNLVTEFREEEINYDESTPPEHLLLSKERSSYYQNVKRNADINMRLKLTAG 2484
Fly 2485 LGRGRTGDIPLKTN----NNLPWLVKVPTQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICI 2545
Fly 2546 WPIFEICNMLSCAVKATESTTGESSTIEAMGGRWALNTATTHATEHNIGFTFSGILRGSSKDEYS 2610
Fly 2611 LMLRTMDWHKFFYYDPTVWTIENALHKLGKSSKRKWPLNDPE--ELRVSRVLDFENAF------- 2666
Fly 2667 ------------DVKYQTKATREFSCCQGLDVTAWGMFINGTGLY--------VAIFMIQEQARL 2711
Fly 2712 DLKANSLQMMPKLKSAFTIDVRFDNGWKSSTPICLEDFTQKSSSNAGRSLYL------------- 2763
Fly 2764 ---RYNSFVDIVIVERDEVLRLILEYRQEDDGRRLFKLRSKFVF----------------TNFTD 2809
Fly 2810 VVLNALTLAMDHKENSTREEVEAYSICKKARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTA 2874
Fly 2875 FVYFVCFSVGGSREISIP-------------IPLAVPFTRRCFSLQAGPESIPLMITLIEKDNVH 2926
Fly 2927 YLNVFRDTAPAIVISNNTNVKFIVAQTSASENSNV--SCTNS--EFVGRNFEW---NQLVLPHSN 2984
Fly 2985 CYYTPPQMYANFPDVEFTMCNLSLAVYKDKLCAKNKIAWSKPIRTDKSWQKFLHVPHHGDVKVVV 3049
Fly 3050 CDKHRAIRLNIYYIAQQLEFSVKDLRSRLTKPENVLMPSQ--EQAAPRPDES------------- 3099
Fly 3100 ----SEQENDTKRVTLPNMVTCAHFNEECESKTQTRIKIFIKSFVFSLQTDNRENDFVKTEVCNI 3160
Fly 3161 YADDSMLIYDDD--DDQRELRLQLPNLQVDNQLYSSGKYDFPVLLC------------------- 3204
Fly 3205 ------AEKLYRRNCSLPQVYDLDHVYKQQAQRTPVSLFTFIFYQDEMQLQNVRCQIPPFRVYIE 3263
Fly 3264 DAYLNQLLEALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQVVAQSLYISEPLRLNSFTVEPLN 3328
Fly 3329 LL-----LSVHTSSR------LYIALDHSPLSFSRYERQQILTVPLR----------FGQSLGLH 3372
Fly 3373 YLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRGPWGFLVGVTQGSASLLRN 3437
Fly 3438 VTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGFAD----GLTQGLTGLGISLLG 3498
Fly 3499 AVGGLAHHT---LEARSS---VGVIAGLTKGIVGALTKPISG----------AAEMLALTGQGVL 3547
Fly 3548 HTVGF--NAMPQ------QVEPSFIRNVALHGSSN--RIWSYLPEELSRDQMLFFSEIMLQISTQ 3602
Fly 3603 -----LRPALLFLTSSVLAIMQSDSED------LAF-------ASP-----ISKVDVLADRED 3642 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 33/113 (29%) |
VPS13_C | 3319..3468 | CDD:293514 | 41/169 (24%) | ||
ATG_C | 3473..3546 | CDD:286423 | 25/92 (27%) | ||
C25H3.11 | NP_001348703.1 | MRS6 | 1..>2091 | CDD:227376 | 482/2763 (17%) |
VPS13 | 145..369 | CDD:374880 | 37/265 (14%) | ||
SHR-BD | 2216..2490 | CDD:369020 | 66/380 (17%) | ||
RICIN | 2545..2649 | CDD:238092 | 25/143 (17%) | ||
MRS6 | <2732..3234 | CDD:227376 | 132/583 (23%) | ||
VPS13_C | 2908..3038 | CDD:374881 | 35/146 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160161236 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5043 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.830 |