Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_740900.1 | Gene: | T08G11.1 / 172705 | WormBaseID: | WBGene00011629 | Length: | 3212 | Species: | Caenorhabditis elegans |
Alignment Length: | 4176 | Identity: | 740/4176 - (17%) |
---|---|---|---|
Similarity: | 1325/4176 - (31%) | Gaps: | 1483/4176 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELSI 69
Fly 70 LVPWTKLMSEPV--------------KIVINTIEFVAKLPDSESKQRRASFQREQRRKSKRESVE 120
Fly 121 QPDQTKSPGPASSSSVVNKIINNINLQCHNIILKYVED-------DIVVSMNVQTLNFSSAGEDW 178
Fly 179 KPTMVDIH-PVSVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVST 242
Fly 243 TSTTRIGVFTKSLDINVSSLQ-----FPMVMRLVKMLLELKPAEFEDDPQNPEDQEAVAEGSESQ 302
Fly 303 QGTESAGRSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGV----YAEELNFQLKNSEYFTDQS 363
Fly 364 MGGIKRIRYTPILRISLGGLYYERTILKECDWANVKAGLSSMCMEPLGAYRSDDLVDRNLVNTQE 428
Fly 429 FQQERSFIDKSLFDENYMFAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPV 493
Fly 494 AESQLRDLGVRIQYRLLSAGITFHFSQSFVQVKKVISDLIRPYDYP-----------GYRSESMK 547
Fly 548 DEDRGVPEPENKNSEMTIPDLEYLMGLVPTCNYKIELRNIVVQLYPRQQQDESSAINQHQLTTTV 612
Fly 613 RQSLLPYLQLKISLVEGTMCGPVNPVRLVQLITHLEEKPRDVVNACYNCFHFNVKNLAL------ 671
Fly 672 -------------MIMNTTPDNGR----AKL----LNI---------------PRVQVNWNRLLA 700
Fly 701 PHLWRQNEAPLETSEIKSEIIT-LEFS---KRELIIAKRLVP---------LISSFSGQDLCD-- 750
Fly 751 LAHIVANVNVNSDVIKLQSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNIRNVVLSTSKN 815
Fly 816 ---ADNKWLEMQCQFPLE-------------EVHSEQEKIPGTVVCLWLEPFRITTDIYLLQFLN 864
Fly 865 FSDNSGRQITKDKEVETDLESVNQSEPPITQSVSNYSTISASAIAFNDFQPRRISRNNSRKISVP 929
Fly 930 EETVHLSSERDERHTQAEPLTIPVANKPQPSNFDTTDFVKRLTKMVVLVEIAQAKIDVCEVMMRK 994
Fly 995 TPGHTDVEYTSIRLPHMKVKSGNCEAIQRGNIRGVIPVASNTELLNWVFDLNEFNVCYRRANVTE 1059
Fly 1060 MIIAPVRTTITLALSFKTSDKVDGSKGKEDKCANTCSINVHVDMSAINIFAQRVKLL---HEHCL 1121
Fly 1122 II--SKMYGSLC--------PDEP---------------------ASKWQTGKMKPR-----LEV 1150
Fly 1151 YTGSAQ-NYPVIKEFLELDPNFEAPKVKSAPKSSVILFCQW--------------TIPRISFEME 1200
Fly 1201 NSNDFKHSKIVMSLEDLLLNI--DKHSDFNKITTKIENFGLNYYEEKHEEWEKIDDLHIKMLGDS 1263
Fly 1264 TNLPLISVVITTVSLEDL-------YAKIGARNPHNKQHTISEV----LIEVQPIEMVLNLDQIT 1317
Fly 1318 EFMVPICEVLEIIGNSASAQSANKPS------------------------AP--VPSKITTVQDL 1356
Fly 1357 PMVHLN-----------------------------SKGIYVYLPLSTGKKSCSVLLLRIESIQ-- 1390
Fly 1391 ----LTPSLENPLVRQLVRPDIYQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYR 1451
Fly 1452 I----------EKTLASKHDNPAFEWNNQSQST-------ELDHMEIFKDFDFIMIYAPAISYDR 1499
Fly 1500 FLVCGQSVEYNCATDFVASLNTHQISLISCIIVRAQRLGCIIDQVCVKNAELPKARSHKTLGNIS 1564
Fly 1565 KYNSVDNSIYFPADPKVFKKDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSD------YFYGSC 1623
Fly 1624 QSDSGIHLGTRMKGYSRSLAAEEINRSGRQPFVLSYPSSVSFVAGIFVLKIYDVLELEE-LERPV 1687
Fly 1688 MKPLFLMTVSQPSFMSTQNFKAAVTQASIFNVNISVAKADVDGKVDSERFNESVFATLPGQLGSS 1752
Fly 1753 GIPPPLLTIKTQYDRLHQKEVDVELRKPILLRICENTIKQLASDVFRIYTVLHETPCFNVRSPRP 1817
Fly 1818 VPEGSQLRQLKMNCYNADRFHLSCDRITAKFYDEERSYKCSFVWLDVSTRIKFSSRPQKAVIRSN 1882
Fly 1883 IGSFYVQSGEK-MLLHPLLMRLSVDLVSEPWSEELLVNATLKLNYLHIDAGVFSILQLQKAQQG- 1945
Fly 1946 ---------VNRIREYAD--REWQQFLRSRPVLG---------------------TPKDVSPC-N 1977
Fly 1978 LIKCTPSHESIERIKRPLKS----------------NAEFY--QDDLRAG---AFQFVYLNSESV 2021
Fly 2022 LPMPYQVQIIKKNYG-IICWRYPQP----RQMTSIHIYP---VPMPVSRPIHI---RCRMEYFSE 2075
Fly 2076 THETFLHYCDFMLSETSTKQLTPPDRPICATIWRVVILQSL-------------ISVDGTCFEGS 2127
Fly 2128 ----------------EDEDLSIEY--LQSDFKVDENNDFILHPKVLVGCMRIDTVFRAEK---- 2170
Fly 2171 VPKLQLLLCCQDIELNFVNQTDNTGELPKQLNKYRLRQTPNITQTFLTVHVE---DLQMHSRIYS 2232
Fly 2233 RNDFSLQTEMRARVKCLDYGFLNMLDVLEPMKFSS----YVRLTDYPRSLVQANFLVDKLRLNCG 2293
Fly 2294 PHVIHTLLSSKYHWQEVLQQKDVR-----------HVLMPKLVIVNRIQTPISFGQTNTVEKIPV 2347
Fly 2348 NPGEVQLYHFRSCSHVQELTFFITNPKTLLVDSSDSVHIALKFEDEEKIHNLRVGEYCITLKLAK 2412
Fly 2413 LSTTQIYILVKGQIELVSMV---PFNLVTEFREEEINYDESTPPEHLLLSKERSSYYQNVKRNAD 2474
Fly 2475 INMRLKLTAGLGRGRTGDIPLKTNN-------NLPWLVKVPTQSAQQFISIWVRILREDIKMDKP 2532
Fly 2533 AEDFQPQKILICIWPIFEICNMLS--------CAVKATESTTGESSTIEAMGGRWALNTATTHAT 2589
Fly 2590 EHNIGFTFSGILRGSSKDEYSLMLRTMDWHKFFYYDPTVWTIENALHKLGKSSKRKWPLNDPEEL 2654
Fly 2655 RVSRVLDFENAFDVKYQTKATREFSCCQGLD--VTAWGMFINGTGLYVAIFMIQEQARLDLKANS 2717
Fly 2718 LQMMPKLKSAFTIDVRFDNGWKSSTPICLEDFTQKSSSNAGRSLYLRYNSFVDIVIVERDEVLRL 2782
Fly 2783 ILEYRQEDDGRRLFKLRSKFVFTNFTDVVLNALTLAMDHKENSTREEVEAYSICKKARSLVSSES 2847
Fly 2848 TKNCSGNAMDVFYDLNAHKAKHNCDTAFVYFVCFSVGGSREISIPIPLAVPFTRRCFSLQAGPES 2912
Fly 2913 IPLMITLIEKDNVHYLNVFRDTAPAIVISNNTNVKFIVAQ-----TSASENSNVSCTNSEFVGRN 2972
Fly 2973 FEWNQLVLPHSNCYYTPPQMYANFPDVEFTMCNLSLAVYKDKLCAKNKIAWSKPIRTDKSWQKF- 3036
Fly 3037 -------------LHVPH-------HGDVKVVVCDKHRAIRLNIYYIAQQLEFSVKDLRSRLTKP 3081
Fly 3082 ENVLMPSQEQAAPRPD---ESSEQENDTKRVTLPNMVTC-----AHF---NEECESKTQTRIKIF 3135
Fly 3136 IKSFVFSLQTDNR----ENDFVKTEVCNIYADDSMLIYDDDDDQRELRLQLPNLQVDNQLYSSGK 3196
Fly 3197 YDFPVLLCAEKLYRRNCSLPQVYDLDHVYKQQ-AQRTPVSLFTFIFYQDEMQLQNV------RCQ 3254
Fly 3255 IPPFRVYIEDAYLNQLLEALVECEPSNCVYSPPVEQDQILLPAGMTLLPDQVVAQS--------- 3310
Fly 3311 LYISEPLRLNSFT------------------VEPLNLLL-SVHTSSRLYIALDHSPLSFSRYERQ 3356
Fly 3357 QILTVPLRFGQSLGLHYLSGAIFGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRGPW 3421
Fly 3422 GFLVGVTQGSASLLRNVTAGTVNSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGFADGLT 3486
Fly 3487 QGLTGLGISLLGAVGGLAHHTLEA---RSSVGVIAGLTKGIVGALTKPISGAAEMLALTGQGVLH 3548
Fly 3549 TVGFNAMPQQVEPSFI----RNVALHGSSNRIWSYLPEELSR------DQMLFF---SEIMLQIS 3600
Fly 3601 TQLRPALLFLTSSVLAIMQSDSEDLAFASPISKVDVLADRED---PSKLYLSLKSERRDDFEGQL 3662
Fly 3663 NYTNERIMKFLNASRL 3678 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 33/125 (26%) |
VPS13_C | 3319..3468 | CDD:293514 | 43/167 (26%) | ||
ATG_C | 3473..3546 | CDD:286423 | 22/75 (29%) | ||
T08G11.1 | NP_740900.1 | MRS6 | 4..>2154 | CDD:227376 | 494/2795 (18%) |
Chorein_N | 4..113 | CDD:289396 | 30/110 (27%) | ||
VPS13 | 139..373 | CDD:293513 | 59/343 (17%) | ||
VPS13_mid_rpt | 560..780 | CDD:293515 | 49/307 (16%) | ||
VPS13_mid_rpt | <1203..1329 | CDD:293515 | 24/136 (18%) | ||
SHR-BD | 2224..2490 | CDD:284143 | 70/478 (15%) | ||
VPS13_C | 2803..2982 | CDD:293514 | 46/181 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |