Sequence 1: | NP_651753.2 | Gene: | Vps13B / 43550 | FlyBaseID: | FBgn0039727 | Length: | 3731 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002934455.3 | Gene: | vps13b / 100490880 | XenbaseID: | XB-GENE-853604 | Length: | 4027 | Species: | Xenopus tropicalis |
Alignment Length: | 4322 | Identity: | 991/4322 - (22%) |
---|---|---|---|
Similarity: | 1697/4322 - (39%) | Gaps: | 1057/4322 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLEEELNLPVELVSGHIHELS 68
Fly 69 ILVPWTKLMSEPVKIVINTIEFVAKLPD----------SESKQRRASFQREQRRKSKRESVEQPD 123
Fly 124 QTKSPGPASSSSVVNKIINNINLQCHNIILKYVEDDIVVSMNVQTLNFSSAGEDWKPTMVDIHPV 188
Fly 189 SVVMRKLLQVSDLTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTSTTRIGVFTK 253
Fly 254 SLDINVSSLQFPMVMRLVKMLLELKPAEF-------EDDPQNPEDQEAVAEGSES---------- 301
Fly 302 -----QQGTESAGRSVFW--WAWSLLP---SFDTE----------APSSSCDTPTGH-----AFD 341
Fly 342 LGVYAEELNFQLKNSEYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKE----CDWANVKAGL 402
Fly 403 SSMCMEP-LGAYRSDDLVDR------------NLVN------TQEFQQERS----------FIDK 438
Fly 439 SLFDENYM-FAERSWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRDLG 502
Fly 503 VRIQYRLLSAGITFHFSQSFV-QVKKVISDLIRPYDYPGYRS--ESMKDEDRGVPEPENKNSEMT 564
Fly 565 IPDLEYLMGLVPT---------CNYKIELR--NIVVQLYP---RQQQDESSAINQHQLTTTVRQS 615
Fly 616 L--LPYLQLKISLVEGTMCGPVNPVRLVQLITHLEEKPRDVVNACY-NCF-----------HFNV 666
Fly 667 KNLALMIMNTTPDNGRA---KLLNIP-----RVQV-----------------------------N 694
Fly 695 W------------NRLLA----PHLWRQNEAPLETSEIKSEIITLEFSKREL------------I 731
Fly 732 IAK--------RLVPLI---------------------SSFSGQDLCDLAHIVANVNVNSDVIKL 767
Fly 768 QSVGTKLNLVYHKYHTHLAAVGSLQGVHTDAVHTKMNIRNVVLSTSKNADNKWLEMQCQFPLEEV 832
Fly 833 HSEQEKIPGTVVCLWLEPFRITTDIYLLQFLNFSDNSGRQITKDKEVETDLESVNQSEPPITQSV 897
Fly 898 SNY--STISASAIAFNDFQPRRISRNNSRKISVPEETVHLSSERDERHTQAEPLTIPVANKPQPS 960
Fly 961 NFDTTDFVKRLTKMVVLVEIAQAKIDVC-------------EVMMRKTPGHTDVEY--------T 1004
Fly 1005 SIR-LPHMKVKSGN---CEAIQRGNIRGVI--PVASNTELLNWVFDLNEFNV-CYRRANVTEMII 1062
Fly 1063 APVRTTITLALSFKTSDKVDGSKGKEDKCANTCSINVHVDMSAINIFAQ--RVKLLHEHCLIISK 1125
Fly 1126 MYGSLCPDEPASKWQTGKMKPRLEVY----TGSAQNYPVIKEFLELDPN-------------FEA 1173
Fly 1174 PKVKSAPKS--------------------SVILFCQWTIPRISFEMENSN-DFKHSKI--VMSLE 1215
Fly 1216 DLLLNIDKHSDFNKITTKIENFGLNYYEEKHEE--WEKIDDLHIKMLGD--------STNLPLIS 1270
Fly 1271 VVITTVSLED-----------------------------LYAKIGARNPHNK------------- 1293
Fly 1294 ----------QHTISEVLIEVQPIEMVLNLDQITEFMVPICEVLEIIGNSASAQSANKPSAPVPS 1348
Fly 1349 KITTVQDLPMVHLNSKGIYVYLPLSTGKKSCS---------VLLLRIESIQLTPSLENPLVRQLV 1404
Fly 1405 RPDIYQKAAELNMLSTPGALVEDRQYELSVRRVSLSTGNWKQTQEYRIEKT--LASKHD----NP 1463
Fly 1464 AFEWNNQSQSTELDHME-------IFKDFDFIMIYAPAISYDR-----------FLVCGQSVEYN 1510
Fly 1511 CATDFVASLNTHQISLISCIIVR--------------------------------------AQRL 1537
Fly 1538 GCIIDQVCVK--NAELPKARSHKTLGNISKYNS-VDNSIYFPADPKVF----------------K 1583
Fly 1584 KDTWIPKSSKKLVSERLSYTNASTSFTDAKGSSDYFYGSCQSDSGIHLGTRMKGYSRSLAAEEIN 1648
Fly 1649 RSGRQPFVLSYPSSVSFVAGIFVLK---------IYDVLELEELERP--------VMKPLFLMTV 1696
Fly 1697 SQPSFMSTQNFKAAVTQASIFNVNISVAKADVDGKVDSERFNESVFATLPGQLG----------- 1750
Fly 1751 ----SSGIPPPLLTIKTQYDRLH-QKEVDVELRKPILLRICENTIKQLASDVFRIYTVLH----- 1805
Fly 1806 ETPCF-NVRSPRPVPEGSQLRQLKMNCYNADRFHLSCDRITAKFYDEERSYKCSFVWLDVSTRIK 1869
Fly 1870 FSSRPQKAVIR----------------SNI-GSFYVQSGEKM--LLHPLLMRLSV-DLVSE---- 1910
Fly 1911 --------PWSEELLVNA-------------TLKLNYLHIDAGVFSILQLQKAQQGVNRIREYAD 1954
Fly 1955 REWQQFLRSRPVLGTPKDVSPCNLIKCTPSHESIE-RIKRPLKSNAEFYQDDLRAGAFQFVYLNS 2018
Fly 2019 ESVLPMPYQVQIIKK---NYGIICWRYPQPRQMTSIHIYPVPMPVSRP-----------IHIRCR 2069
Fly 2070 MEYFSETHETFLHYCDFMLSETSTKQLTPPD--------RPICATIWRVVILQSLISVDGTCFEG 2126
Fly 2127 SEDEDLSIEYLQSDFKVDENNDFILHPKVLVGCMRIDTVFRAEKVPKLQLLLCCQDIELNFVNQT 2191
Fly 2192 DNTGEL-PKQLNKYRLRQTPNITQTFLTVHVEDLQMHSRIYSRNDFS----LQTEMRARVKCLDY 2251
Fly 2252 GFLNMLDVLEPMKFSSYVRLTDYP-RSLVQANFLVDKLRLNCGPHVIHTLLSSKYHWQEVLQQKD 2315
Fly 2316 VRHVLMPKLVIVNRIQTPISFGQTNTVEKIPVNPGEVQLYHFRSC--SHVQELTFFITNPKTLLV 2378
Fly 2379 DSSDSVHIAL------KFEDEEKIHN----LRVGEY-----CITLKLAKLSTTQIYILVKGQIEL 2428
Fly 2429 VSMVPFNLVTEFREEEINYD-ESTPPEHL--LLSKERSSYYQNVKRNADINMRLKLTAGLGRGRT 2490
Fly 2491 GDIPLK---TNNNLPWLVKVPTQSAQQFISIWVRILREDIKMDKPAEDFQPQKILICIWPIFEIC 2552
Fly 2553 NML--SCAVKATESTTG--ESSTIEAMGGRWALNTATTHATEHNIGFTFSGILRGSSKDEYSLML 2613
Fly 2614 RTMDWHKFFYYDPTVWTIENALHKL-------GKSSKR--------------KWPLNDPEELRVS 2657
Fly 2658 RVLDFENAFDVKYQTKATREFSCCQGLDVTAWGMFINGTGLYVAIFMIQEQARLDLKANSLQMMP 2722
Fly 2723 KLKSAFTIDVRFDNG---WKSSTPICLEDFTQ---KSSSNAGRSLYLRYNSFVDIVI-----VER 2776
Fly 2777 DEVLRLILEYRQEDDGRRLFKLRSKFVFTNFTDV------VLNALTLAMDHKENSTREEV----- 2830
Fly 2831 -EAYSICKKARSLVSSESTKNCSGNAMDVFYDLNAHKAKHNCDTAFVYF---VCFSVGGSRE--I 2889
Fly 2890 SIPIPLAVPFTRRCFSLQAGP------ESIPLMITLIEKDNVHYLNVFRDTAPAIVISNNTNVKF 2948
Fly 2949 IVAQT-SASENSNVSCTNSEFVGRNFEWNQLVLP-----HSNCYYTPPQMYANFPDVEFTMCNLS 3007
Fly 3008 LAVYKDKLCAKNKIAWSKPIRTDKSWQKFLHVPHHGDVKVVVCDKHRAIRLNIYYIAQQLEFSVK 3072
Fly 3073 DLRSRLTKPENVLMPSQEQAAPRPDESSEQENDTKRVTLPNMVT---CAHFNEECESKTQTR-IK 3133
Fly 3134 IFIKSFVFSLQTDNRENDFVKTEVCNIYAD---DSMLIYDDDDDQRELRLQLPNLQVDNQLYSSG 3195
Fly 3196 KYDFPVLLCAE------KLYRRNCSLPQVYDLDHVYKQQAQRTPVSLFTFIFYQDE-MQLQNVRC 3253
Fly 3254 QIPPFRVYIEDA---YLNQLLEALVECE--PSNCVYSPPVEQDQILLPAGMTLLPDQVVAQSLYI 3313
Fly 3314 SEPLRLNSFTVEPLNLLLSVHTSSRLYIALDHSPLSFSRYERQQILTVPLRFGQSLGLHYLSGAI 3378
Fly 3379 FGAGWVVGSLEILGSPSGLARSFSTGLRDFVSMPVQGLFRGPWGFLVGVTQGSASLLRNVTAGTV 3443
Fly 3444 NSVTKLAGSVARNLDRLTLDAEHIELTEARRRARPQGFADGLTQGLTGLGISLLGAVGGLA---- 3504
Fly 3505 ---HHTLEARSSV-----GVIAGLTKGIVGALTKPISGAAEMLALTGQGVLHTVGFNAMP-QQVE 3560
Fly 3561 PSFIRNVALHGSSNR-IWSYLPEELSRDQM-LFFSEIMLQISTQLRPALLFLTSSVLAI--MQSD 3621
Fly 3622 SEDLAFASPISKVDVLADREDPSKLYLSLKSE 3653 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Vps13B | NP_651753.2 | Chorein_N | 5..117 | CDD:289396 | 59/121 (49%) |
VPS13_C | 3319..3468 | CDD:293514 | 79/148 (53%) | ||
ATG_C | 3473..3546 | CDD:286423 | 39/84 (46%) | ||
vps13b | XP_002934455.3 | Chorein_N | 6..>94 | CDD:403729 | 51/87 (59%) |
SHR-BD | <2624..>2708 | CDD:399561 | 20/103 (19%) | ||
MRS6 | <3443..3862 | CDD:227376 | 171/437 (39%) | ||
VPS13_C | <3615..3736 | CDD:407143 | 63/120 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 368 | 1.000 | Domainoid score | I916 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 787 | 1.000 | Inparanoid score | I506 |
OMA | 1 | 1.010 | - | - | QHG46865 | |
OrthoDB | 1 | 1.010 | - | - | D51820at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0008361 | |
OrthoInspector | 1 | 1.000 | - | - | oto105545 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1642 |
SonicParanoid | 1 | 1.000 | - | - | X10428 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.100 |